Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:135110649-135683261

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Irm1 7 117238481 to 135128325 17889844 QTL inflammatory response modulator 1
Tlsm1 7 122651440 to 135569172 12917732 QTL thymic lymphoma susceptible 1
Dock1 7 134670654 to 135173639 502985 + protein coding gene dedicator of cytokinesis 1
Gm24581 7 135131514 to 135131646 132 - snoRNA gene predicted gene, 24581
D7Mit288 7 135132308 to 135132432 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 288
Tssr69623 7 135171152 to 135171157 5 + TSS region transcription start site region 69623
Tssr69624 7 135172758 to 135172762 4 + TSS region transcription start site region 69624
1700120G07Rik 7 135191765 to 135196002 4237 - lincRNA gene RIKEN cDNA 1700120G07 gene
Tssr75310 7 135196032 to 135196042 10 - TSS region transcription start site region 75310
Tssr69625 7 135268579 to 135268581 2 + TSS region transcription start site region 69625
Nps 7 135268619 to 135272942 4323 + protein coding gene neuropeptide S
Gm45339 7 135274658 to 135277146 2488 - lincRNA gene predicted gene 45339
Tssr69626 7 135300937 to 135300941 4 + TSS region transcription start site region 69626
Tssr2429 7 135357764 to 135357766 2 + TSS region transcription start site region 2429
Gm36062 7 135395649 to 135398261 2612 - lncRNA gene predicted gene, 36062
Tssr69627 7 135396330 to 135396362 32 + TSS region transcription start site region 69627
4930544L04Rik 7 135396335 to 135399544 3209 + unclassified gene RIKEN cDNA 4930544L04 gene
Cpgi19847 7 135410086 to 135411092 1006 CpG island CpG island 19847
Foxi2 7 135410367 to 135413615 3248 + protein coding gene forkhead box I2
Gm39105 7 135424132 to 135429914 5782 - lncRNA gene predicted gene, 39105
Gm36356 7 135486029 to 135491315 5286 + lincRNA gene predicted gene, 36356
Clrn3 7 135511466 to 135528654 17188 - protein coding gene clarin 3
Tssr75311 7 135525299 to 135525305 6 - TSS region transcription start site region 75311
Tssr75312 7 135528587 to 135528596 9 - TSS region transcription start site region 75312
Tssr75313 7 135528600 to 135528632 32 - TSS region transcription start site region 75313
Tssr75314 7 135528645 to 135528661 16 - TSS region transcription start site region 75314
Tssr69628 7 135534979 to 135534986 7 + TSS region transcription start site region 69628
Cpgi19848 7 135537629 to 135538750 1121 CpG island CpG island 19848
Tssr69629 7 135537814 to 135537830 16 + TSS region transcription start site region 69629
Ptpre 7 135537824 to 135686294 148470 + protein coding gene protein tyrosine phosphatase, receptor type, E
Tssr69630 7 135537844 to 135537859 15 + TSS region transcription start site region 69630
Mir1962 7 135566162 to 135566282 120 + miRNA gene microRNA 1962
9230118N17Rik 7 135566856 to 135568125 1269 unclassified gene RIKEN cDNA 9230118N17 gene
D7Mit13 7 135568978 to 135569172 194 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 13
Tssr69631 7 135605631 to 135605645 14 + TSS region transcription start site region 69631
Tssr69632 7 135605776 to 135605784 8 + TSS region transcription start site region 69632
Tssr75315 7 135626431 to 135626441 10 - TSS region transcription start site region 75315
Tssr75316 7 135645651 to 135645660 9 - TSS region transcription start site region 75316
5830432E09Rik 7 135648457 to 135652314 3857 - antisense lncRNA gene RIKEN cDNA 5830432E09 gene
Tssr69633 7 135650343 to 135650354 11 + TSS region transcription start site region 69633
Tssr69634 7 135650360 to 135650376 16 + TSS region transcription start site region 69634
Tssr69635 7 135650384 to 135650406 22 + TSS region transcription start site region 69635
Tssr75317 7 135651806 to 135651868 62 - TSS region transcription start site region 75317
Tssr75318 7 135651892 to 135651910 18 - TSS region transcription start site region 75318
Tssr69636 7 135651911 to 135651920 9 + TSS region transcription start site region 69636
Tssr69637 7 135651925 to 135651944 19 + TSS region transcription start site region 69637
Tssr69638 7 135651957 to 135651972 15 + TSS region transcription start site region 69638
Tssr75319 7 135651987 to 135651995 8 - TSS region transcription start site region 75319
Tssr75320 7 135652093 to 135652113 20 - TSS region transcription start site region 75320
Tssr75321 7 135652148 to 135652173 25 - TSS region transcription start site region 75321
Tssr75322 7 135652259 to 135652268 9 - TSS region transcription start site region 75322
Tssr75323 7 135652273 to 135652302 29 - TSS region transcription start site region 75323
Tssr75324 7 135652325 to 135652337 12 - TSS region transcription start site region 75324
Tssr69639 7 135652378 to 135652382 4 + TSS region transcription start site region 69639
Tssr69640 7 135652483 to 135652499 16 + TSS region transcription start site region 69640
Tssr69641 7 135652529 to 135652536 7 + TSS region transcription start site region 69641
Tssr69642 7 135652538 to 135652549 11 + TSS region transcription start site region 69642
Tssr69643 7 135653930 to 135653952 22 + TSS region transcription start site region 69643
Tssr69644 7 135653970 to 135653980 10 + TSS region transcription start site region 69644
Tssr69645 7 135662209 to 135662228 19 + TSS region transcription start site region 69645
Tssr69646 7 135662238 to 135662257 19 + TSS region transcription start site region 69646
Tssr69647 7 135666847 to 135666860 13 + TSS region transcription start site region 69647
Tssr69648 7 135667437 to 135667457 20 + TSS region transcription start site region 69648
Tssr69649 7 135667517 to 135667557 40 + TSS region transcription start site region 69649
Tssr69650 7 135668257 to 135668268 11 + TSS region transcription start site region 69650
Tssr69651 7 135671608 to 135671614 6 + TSS region transcription start site region 69651
Tssr69652 7 135672048 to 135672052 4 + TSS region transcription start site region 69652
Tssr69653 7 135675210 to 135675260 50 + TSS region transcription start site region 69653