Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:133039859-135689881

Filter by:
221 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Irm1 7 117238481 to 135128325 17889844 QTL inflammatory response modulator 1
Tlsm1 7 122651440 to 135569172 12917732 QTL thymic lymphoma susceptible 1
Ctbp2 7 132987011 to 133123749 136738 - protein coding gene C-terminal binding protein 2
Tssr75245 7 133089111 to 133089115 4 - TSS region transcription start site region 75245
D930021H04Rik 7 133093830 to 133095626 1796 unclassified gene RIKEN cDNA D930021H04 gene
Tssr75246 7 133112706 to 133112718 12 - TSS region transcription start site region 75246
B930086L07Rik 7 133116534 to 133120271 3737 - unclassified gene RIKEN cDNA B930086L07 gene
Cpgi19838 7 133121522 to 133125163 3641 CpG island CpG island 19838
Tssr75247 7 133122185 to 133122214 29 - TSS region transcription start site region 75247
Tssr75248 7 133122738 to 133122762 24 - TSS region transcription start site region 75248
Tssr75249 7 133123160 to 133123185 25 - TSS region transcription start site region 75249
Tssr75250 7 133123194 to 133123224 30 - TSS region transcription start site region 75250
Tssr75251 7 133123328 to 133123339 11 - TSS region transcription start site region 75251
Tssr75252 7 133123353 to 133123377 24 - TSS region transcription start site region 75252
Tssr75253 7 133123383 to 133123404 21 - TSS region transcription start site region 75253
Tssr75254 7 133123409 to 133123419 10 - TSS region transcription start site region 75254
Gm35364 7 133123549 to 133124611 1062 + protein coding gene predicted gene, 35364
Tssr75255 7 133123853 to 133123876 23 - TSS region transcription start site region 75255
Tssr69598 7 133124018 to 133124032 14 + TSS region transcription start site region 69598
4930483O08Rik 7 133128251 to 133142457 14206 + lincRNA gene RIKEN cDNA 4930483O08 gene
Tssr75256 7 133186426 to 133186433 7 - TSS region transcription start site region 75256
Gm35567 7 133215954 to 133221529 5575 + lncRNA gene predicted gene, 35567
Tssr69599 7 133309753 to 133309755 2 + TSS region transcription start site region 69599
Gm45672 7 133319985 to 133333201 13216 - lincRNA gene predicted gene 45672
Cpgi19839 7 133377753 to 133377969 216 CpG island CpG island 19839
Gm9330 7 133408787 to 133409482 695 - pseudogene predicted gene 9330
D7Mit108 7 133472545 to 133472697 152 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 108
Tex36 7 133587024 to 133602115 15091 - protein coding gene testis expressed 36
Tssr75257 7 133602110 to 133602165 55 - TSS region transcription start site region 75257
Tssr75258 7 133602183 to 133602194 11 - TSS region transcription start site region 75258
Tssr75259 7 133602202 to 133602206 4 - TSS region transcription start site region 75259
Gm35625 7 133605493 to 133607338 1845 + lincRNA gene predicted gene, 35625
Gm45671 7 133608226 to 133616265 8039 + lincRNA gene predicted gene 45671
D7Mit207 7 133610893 to 133611023 130 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 207
Gm28747 7 133626349 to 133627725 1376 - lincRNA gene predicted gene 28747
D7Mit208 7 133628028 to 133628159 131 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 208
Cpgi19840 7 133637128 to 133638452 1324 CpG island CpG island 19840
Edrf1 7 133637543 to 133672971 35428 + protein coding gene erythroid differentiation regulatory factor 1
Tssr69600 7 133637549 to 133637559 10 + TSS region transcription start site region 69600
Tssr69601 7 133637667 to 133637676 9 + TSS region transcription start site region 69601
Tssr69602 7 133637686 to 133637742 56 + TSS region transcription start site region 69602
Mmp21 7 133674270 to 133680061 5791 - protein coding gene matrix metallopeptidase 21
Uros 7 133686243 to 133710072 23829 - protein coding gene uroporphyrinogen III synthase
Tssr75260 7 133702473 to 133702475 2 - TSS region transcription start site region 75260
Tssr75261 7 133702487 to 133702509 22 - TSS region transcription start site region 75261
Tssr75262 7 133702515 to 133702524 9 - TSS region transcription start site region 75262
Cpgi19841 7 133708660 to 133709809 1149 CpG island CpG island 19841
Tssr75263 7 133709028 to 133709040 12 - TSS region transcription start site region 75263
Tssr75264 7 133709051 to 133709067 16 - TSS region transcription start site region 75264
Tssr75265 7 133709069 to 133709099 30 - TSS region transcription start site region 75265
Bccip 7 133709333 to 133721145 11812 + protein coding gene BRCA2 and CDKN1A interacting protein
Tssr69603 7 133709335 to 133709348 13 + TSS region transcription start site region 69603
Tssr69604 7 133709351 to 133709358 7 + TSS region transcription start site region 69604
Tssr75266 7 133710430 to 133710447 17 - TSS region transcription start site region 75266
Dhx32 7 133720942 to 133782726 61784 - protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 32
Tssr75267 7 133730828 to 133730835 7 - TSS region transcription start site region 75267
Tssr75268 7 133730860 to 133730875 15 - TSS region transcription start site region 75268
Tssr75269 7 133732266 to 133732269 3 - TSS region transcription start site region 75269
Gm15483 7 133738479 to 133738934 455 - pseudogene predicted gene 15483
Tssr75270 7 133738947 to 133738961 14 - TSS region transcription start site region 75270
Tssr69605 7 133747553 to 133747554 1 + TSS region transcription start site region 69605
Tssr69606 7 133747564 to 133747577 13 + TSS region transcription start site region 69606
Tssr69607 7 133747582 to 133747604 22 + TSS region transcription start site region 69607
Tssr69608 7 133747618 to 133747628 10 + TSS region transcription start site region 69608
Gm45670 7 133747624 to 133753038 5414 + antisense lncRNA gene predicted gene 45670
Tssr69609 7 133747640 to 133747656 16 + TSS region transcription start site region 69609
Tssr75271 7 133760080 to 133760100 20 - TSS region transcription start site region 75271
Tssr75272 7 133760137 to 133760171 34 - TSS region transcription start site region 75272
Cpgi19842 7 133765833 to 133766000 167 CpG island CpG island 19842
Cpgi19843 7 133775941 to 133777127 1186 CpG island CpG island 19843
Tssr75273 7 133776681 to 133776704 23 - TSS region transcription start site region 75273
Tssr75274 7 133776711 to 133776734 23 - TSS region transcription start site region 75274
Tssr75275 7 133776740 to 133776771 31 - TSS region transcription start site region 75275
Tssr75276 7 133776772 to 133776811 39 - TSS region transcription start site region 75276
Tssr69610 7 133776857 to 133776902 45 + TSS region transcription start site region 69610
Fank1 7 133776861 to 133881532 104671 + protein coding gene fibronectin type 3 and ankyrin repeat domains 1
Tssr75277 7 133782721 to 133782762 41 - TSS region transcription start site region 75277
Tssr75278 7 133782776 to 133782791 15 - TSS region transcription start site region 75278
D7Mit304 7 133808385 to 133808489 104 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 304
Tssr75279 7 133810640 to 133810673 33 - TSS region transcription start site region 75279
Adam12 7 133883199 to 134225097 341898 - protein coding gene a disintegrin and metallopeptidase domain 12 (meltrin alpha)
Tssr75280 7 133917664 to 133917667 3 - TSS region transcription start site region 75280
Gm23631 7 133939619 to 133939741 122 - miRNA gene predicted gene, 23631
Tssr75281 7 133958796 to 133958808 12 - TSS region transcription start site region 75281
5033415L01Rik 7 133976077 to 133977347 1270 unclassified gene RIKEN cDNA 5033415L01 gene
Tssr69611 7 134006612 to 134006614 2 + TSS region transcription start site region 69611
6030403N03Rik 7 134015317 to 134017518 2201 unclassified gene RIKEN cDNA 6030403N03 gene
Gm39103 7 134020400 to 134039439 19039 + lncRNA gene predicted gene, 39103
Tssr69612 7 134022814 to 134022834 20 + TSS region transcription start site region 69612
Tssr69613 7 134031211 to 134031213 2 + TSS region transcription start site region 69613
D7Mit332 7 134032360 to 134032474 114 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 332
Bmd9 7 134032360 to 134032474 114 QTL bone mineral density 9
Gm19514 7 134095790 to 134100278 4488 - unclassified gene predicted gene, 19514
Tssr75282 7 134172874 to 134172888 14 - TSS region transcription start site region 75282
5830403F22Rik 7 134184895 to 134194886 9991 - lncRNA gene RIKEN cDNA 5830403F22 gene
Tssr75283 7 134197773 to 134197776 3 - TSS region transcription start site region 75283
Tssr75284 7 134215029 to 134215038 9 - TSS region transcription start site region 75284
Tssr75285 7 134221532 to 134221543 11 - TSS region transcription start site region 75285
Cpgi19844 7 134224304 to 134225698 1394 CpG island CpG island 19844
Tssr75286 7 134224951 to 134224985 34 - TSS region transcription start site region 75286
Tssr75287 7 134224989 to 134225042 53 - TSS region transcription start site region 75287
Tssr75288 7 134225088 to 134225104 16 - TSS region transcription start site region 75288
Tssr75289 7 134225105 to 134225136 31 - TSS region transcription start site region 75289
Tssr69614 7 134225148 to 134225152 4 + TSS region transcription start site region 69614
Tssr75290 7 134225154 to 134225170 16 - TSS region transcription start site region 75290
Tssr75291 7 134225175 to 134225189 14 - TSS region transcription start site region 75291
Tssr75292 7 134225196 to 134225205 9 - TSS region transcription start site region 75292
Tssr75293 7 134225379 to 134225418 39 - TSS region transcription start site region 75293
A130023I24Rik 7 134227474 to 134230705 3231 - unclassified non-coding RNA gene RIKEN cDNA A130023I24 gene
Tssr75294 7 134232043 to 134232054 11 - TSS region transcription start site region 75294
Tssr75295 7 134232080 to 134232094 14 - TSS region transcription start site region 75295
Tssr75296 7 134232125 to 134232144 19 - TSS region transcription start site region 75296
Tssr75297 7 134232154 to 134232175 21 - TSS region transcription start site region 75297
1700023G08Rik 7 134261315 to 134261881 566 unclassified gene RIKEN cDNA 1700023G08 gene
D7Ertd443e 7 134265779 to 134385661 119882 - protein coding gene DNA segment, Chr 7, ERATO Doi 443, expressed
Tssr75298 7 134266202 to 134266204 2 - TSS region transcription start site region 75298
Tssr75299 7 134341965 to 134341968 3 - TSS region transcription start site region 75299
Tssr75300 7 134341975 to 134341996 21 - TSS region transcription start site region 75300
Tssr75301 7 134364859 to 134364881 22 - TSS region transcription start site region 75301
D7Mit287 7 134382009 to 134382127 118 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 287
Gm35970 7 134410266 to 134414649 4383 + lncRNA gene predicted gene, 35970
Tssr75302 7 134413810 to 134413831 21 - TSS region transcription start site region 75302
Tssr75303 7 134413843 to 134413856 13 - TSS region transcription start site region 75303
Tssr75304 7 134413873 to 134413880 7 - TSS region transcription start site region 75304
Tssr2427 7 134419948 to 134419950 2 - TSS region transcription start site region 2427
Gm4593 7 134425278 to 134501160 75882 - lincRNA gene predicted gene 4593
Tssr75305 7 134498931 to 134498939 8 - TSS region transcription start site region 75305
Tssr75306 7 134501126 to 134501131 5 - TSS region transcription start site region 75306
Tssr75307 7 134520101 to 134520131 30 - TSS region transcription start site region 75307
Gm9333 7 134660335 to 134661654 1319 + pseudogene predicted gene 9333
Tssr69615 7 134669692 to 134669706 14 + TSS region transcription start site region 69615
Cpgi19845 7 134669973 to 134671677 1704 CpG island CpG island 19845
Tssr69616 7 134670650 to 134670661 11 + TSS region transcription start site region 69616
Dock1 7 134670654 to 135173639 502985 + protein coding gene dedicator of cytokinesis 1
Tssr69617 7 134670667 to 134670715 48 + TSS region transcription start site region 69617
Tssr69618 7 134735935 to 134735942 7 + TSS region transcription start site region 69618
Tssr69619 7 134776640 to 134776651 11 + TSS region transcription start site region 69619
Tssr69620 7 134800704 to 134800709 5 + TSS region transcription start site region 69620
Tssr69621 7 134852985 to 134852999 14 + TSS region transcription start site region 69621
Insyn2a 7 134881926 to 134938430 56504 - protein coding gene inhibitory synaptic factor 2A
Tssr2428 7 134883448 to 134883453 5 - TSS region transcription start site region 2428
Gm45532 7 134900670 to 134904289 3619 + unclassified gene predicted gene 45532
Gm45597 7 134909915 to 134911908 1993 - unclassified gene predicted gene 45597
Tssr75308 7 134911872 to 134911900 28 - TSS region transcription start site region 75308
Cpgi19846 7 134937211 to 134938737 1526 CpG island CpG island 19846
Tssr75309 7 134938264 to 134938313 49 - TSS region transcription start site region 75309
Tssr69622 7 135108750 to 135108763 13 + TSS region transcription start site region 69622
Gm24581 7 135131514 to 135131646 132 - snoRNA gene predicted gene, 24581
D7Mit288 7 135132308 to 135132432 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 288
Tssr69623 7 135171152 to 135171157 5 + TSS region transcription start site region 69623
Tssr69624 7 135172758 to 135172762 4 + TSS region transcription start site region 69624
1700120G07Rik 7 135191765 to 135196002 4237 - lincRNA gene RIKEN cDNA 1700120G07 gene
Tssr75310 7 135196032 to 135196042 10 - TSS region transcription start site region 75310
Tssr69625 7 135268579 to 135268581 2 + TSS region transcription start site region 69625
Nps 7 135268619 to 135272942 4323 + protein coding gene neuropeptide S
Gm45339 7 135274658 to 135277146 2488 - lincRNA gene predicted gene 45339
Tssr69626 7 135300937 to 135300941 4 + TSS region transcription start site region 69626
Tssr2429 7 135357764 to 135357766 2 + TSS region transcription start site region 2429
Gm36062 7 135395649 to 135398261 2612 - lncRNA gene predicted gene, 36062
Tssr69627 7 135396330 to 135396362 32 + TSS region transcription start site region 69627
4930544L04Rik 7 135396335 to 135399544 3209 + unclassified gene RIKEN cDNA 4930544L04 gene
Cpgi19847 7 135410086 to 135411092 1006 CpG island CpG island 19847
Foxi2 7 135410367 to 135413615 3248 + protein coding gene forkhead box I2
Gm39105 7 135424132 to 135429914 5782 - lncRNA gene predicted gene, 39105
Gm36356 7 135486029 to 135491315 5286 + lincRNA gene predicted gene, 36356
Clrn3 7 135511466 to 135528654 17188 - protein coding gene clarin 3
Tssr75311 7 135525299 to 135525305 6 - TSS region transcription start site region 75311
Tssr75312 7 135528587 to 135528596 9 - TSS region transcription start site region 75312
Tssr75313 7 135528600 to 135528632 32 - TSS region transcription start site region 75313
Tssr75314 7 135528645 to 135528661 16 - TSS region transcription start site region 75314
Tssr69628 7 135534979 to 135534986 7 + TSS region transcription start site region 69628
Cpgi19848 7 135537629 to 135538750 1121 CpG island CpG island 19848
Tssr69629 7 135537814 to 135537830 16 + TSS region transcription start site region 69629
Ptpre 7 135537824 to 135686294 148470 + protein coding gene protein tyrosine phosphatase, receptor type, E
Tssr69630 7 135537844 to 135537859 15 + TSS region transcription start site region 69630
Mir1962 7 135566162 to 135566282 120 + miRNA gene microRNA 1962
9230118N17Rik 7 135566856 to 135568125 1269 unclassified gene RIKEN cDNA 9230118N17 gene
D7Mit13 7 135568978 to 135569172 194 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 13
Tssr69631 7 135605631 to 135605645 14 + TSS region transcription start site region 69631
Tssr69632 7 135605776 to 135605784 8 + TSS region transcription start site region 69632
Tssr75315 7 135626431 to 135626441 10 - TSS region transcription start site region 75315
Tssr75316 7 135645651 to 135645660 9 - TSS region transcription start site region 75316
5830432E09Rik 7 135648457 to 135652314 3857 - antisense lncRNA gene RIKEN cDNA 5830432E09 gene
Tssr69633 7 135650343 to 135650354 11 + TSS region transcription start site region 69633
Tssr69634 7 135650360 to 135650376 16 + TSS region transcription start site region 69634
Tssr69635 7 135650384 to 135650406 22 + TSS region transcription start site region 69635
Tssr75317 7 135651806 to 135651868 62 - TSS region transcription start site region 75317
Tssr75318 7 135651892 to 135651910 18 - TSS region transcription start site region 75318
Tssr69636 7 135651911 to 135651920 9 + TSS region transcription start site region 69636
Tssr69637 7 135651925 to 135651944 19 + TSS region transcription start site region 69637
Tssr69638 7 135651957 to 135651972 15 + TSS region transcription start site region 69638
Tssr75319 7 135651987 to 135651995 8 - TSS region transcription start site region 75319
Tssr75320 7 135652093 to 135652113 20 - TSS region transcription start site region 75320
Tssr75321 7 135652148 to 135652173 25 - TSS region transcription start site region 75321
Tssr75322 7 135652259 to 135652268 9 - TSS region transcription start site region 75322
Tssr75323 7 135652273 to 135652302 29 - TSS region transcription start site region 75323
Tssr75324 7 135652325 to 135652337 12 - TSS region transcription start site region 75324
Tssr69639 7 135652378 to 135652382 4 + TSS region transcription start site region 69639
Tssr69640 7 135652483 to 135652499 16 + TSS region transcription start site region 69640
Tssr69641 7 135652529 to 135652536 7 + TSS region transcription start site region 69641