MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:13299707-13430076

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lig1	7	13277313 to 13311427	34114	+	protein coding gene	ligase I, DNA, ATP-dependent
Tssr64543	7	13303192 to 13303216	24	+	TSS region	transcription start site region 64543
Tssr64544	7	13309580 to 13309605	25	+	TSS region	transcription start site region 64544
Tssr64545	7	13309617 to 13309626	9	+	TSS region	transcription start site region 64545
Tssr64546	7	13324570 to 13324586	16	+	TSS region	transcription start site region 64546
Tssr64547	7	13324588 to 13324600	12	+	TSS region	transcription start site region 64547
Tssr64548	7	13324654 to 13324661	7	+	TSS region	transcription start site region 64548
Pla2g4c	7	13324655 to 13360672	36017	+	protein coding gene	phospholipase A2, group IVC (cytosolic, calcium-independent)
Rps8-ps4	7	13332646 to 13333257	611	-	pseudogene	ribosomal protein S8, pseudogene 4
Tssr70660	7	13333272 to 13333280	8	-	TSS region	transcription start site region 70660
Gm24909	7	13338830 to 13339109	279	+	unclassified non-coding RNA gene	predicted gene, 24909
Gm45268	7	13364707 to 13365076	369	-	pseudogene	predicted gene 45268
Pla2g4c-ps	7	13372629 to 13375488	2859	+	pseudogene	phospholipase A2, group IVC (cytosolic, calcium-independent), pseudogene
Gm23499	7	13374481 to 13374748	267	+	unclassified non-coding RNA gene	predicted gene, 23499
Tssr64549	7	13398115 to 13398127	12	+	TSS region	transcription start site region 64549
Cabp5	7	13398132 to 13408887	10755	+	protein coding gene	calcium binding protein 5
Tssr64550	7	13398150 to 13398168	18	+	TSS region	transcription start site region 64550