Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:132851426-133521433

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eef1akmt2 7 132827457 to 132852673 25216 - protein coding gene EEF1A lysine methyltransferase 2
Cpgi19835 7 132852290 to 132852784 494 CpG island CpG island 19835
Tssr75229 7 132852606 to 132852655 49 - TSS region transcription start site region 75229
Tssr75230 7 132852657 to 132852668 11 - TSS region transcription start site region 75230
Cpgi19836 7 132859087 to 132859757 670 CpG island CpG island 19836
Abraxas2 7 132859225 to 132885111 25886 + protein coding gene BRISC complex subunit
Tssr69588 7 132859238 to 132859266 28 + TSS region transcription start site region 69588
1500002F19Rik 7 132874614 to 132897571 22957 - lncRNA gene RIKEN cDNA 1500002F19 gene
Tssr75231 7 132888640 to 132888657 17 - TSS region transcription start site region 75231
Gm46003 7 132896878 to 132900134 3256 + lncRNA gene predicted gene, 46003
Tssr75232 7 132910958 to 132910967 9 - TSS region transcription start site region 75232
Tssr75233 7 132910982 to 132910983 1 - TSS region transcription start site region 75233
Tssr75234 7 132911002 to 132911008 6 - TSS region transcription start site region 75234
Gm45502 7 132911089 to 132919732 8643 + lincRNA gene predicted gene 45502
Cpgi19837 7 132930744 to 132932191 1447 CpG island CpG island 19837
Tssr69589 7 132931112 to 132931123 11 + TSS region transcription start site region 69589
Zranb1 7 132931142 to 132985411 54269 + protein coding gene zinc finger, RAN-binding domain containing 1
Tssr69590 7 132931147 to 132931155 8 + TSS region transcription start site region 69590
Tssr69591 7 132931166 to 132931185 19 + TSS region transcription start site region 69591
Tssr69592 7 132931199 to 132931219 20 + TSS region transcription start site region 69592
Tssr69593 7 132931228 to 132931246 18 + TSS region transcription start site region 69593
Tssr69594 7 132931351 to 132931363 12 + TSS region transcription start site region 69594
Tssr75235 7 132932148 to 132932161 13 - TSS region transcription start site region 75235
Tssr69595 7 132933581 to 132933599 18 + TSS region transcription start site region 69595
Gm15718 7 132979582 to 132983552 3970 - antisense lncRNA gene predicted gene 15718
Tssr75236 7 132984156 to 132984160 4 - TSS region transcription start site region 75236
Ctbp2 7 132987011 to 133123749 136738 - protein coding gene C-terminal binding protein 2
Tssr75237 7 132988221 to 132988258 37 - TSS region transcription start site region 75237
Tssr75238 7 132989750 to 132989754 4 - TSS region transcription start site region 75238
Tssr75239 7 132991656 to 132991678 22 - TSS region transcription start site region 75239
Eih4 7 132998156 to 4235946 -128762210 QTL ethanol induced hypothermia 4
4932437C15Rik 7 133001443 to 133005561 4118 + lncRNA gene RIKEN cDNA 4932437C15 gene
Tssr69596 7 133001617 to 133001624 7 + TSS region transcription start site region 69596
Tssr75240 7 133005801 to 133005845 44 - TSS region transcription start site region 75240
Tssr69597 7 133005989 to 133006025 36 + TSS region transcription start site region 69597
Tssr75241 7 133015313 to 133015329 16 - TSS region transcription start site region 75241
Tssr75242 7 133015469 to 133015482 13 - TSS region transcription start site region 75242
Tssr75243 7 133015501 to 133015519 18 - TSS region transcription start site region 75243
Tssr75244 7 133039712 to 133039714 2 - TSS region transcription start site region 75244
Tssr75245 7 133089111 to 133089115 4 - TSS region transcription start site region 75245
D930021H04Rik 7 133093830 to 133095626 1796 unclassified gene RIKEN cDNA D930021H04 gene
Tssr75246 7 133112706 to 133112718 12 - TSS region transcription start site region 75246
B930086L07Rik 7 133116534 to 133120271 3737 - unclassified gene RIKEN cDNA B930086L07 gene
Cpgi19838 7 133121522 to 133125163 3641 CpG island CpG island 19838
Tssr75247 7 133122185 to 133122214 29 - TSS region transcription start site region 75247
Tssr75248 7 133122738 to 133122762 24 - TSS region transcription start site region 75248
Tssr75249 7 133123160 to 133123185 25 - TSS region transcription start site region 75249
Tssr75250 7 133123194 to 133123224 30 - TSS region transcription start site region 75250
Tssr75251 7 133123328 to 133123339 11 - TSS region transcription start site region 75251
Tssr75252 7 133123353 to 133123377 24 - TSS region transcription start site region 75252
Tssr75253 7 133123383 to 133123404 21 - TSS region transcription start site region 75253
Tssr75254 7 133123409 to 133123419 10 - TSS region transcription start site region 75254
Gm35364 7 133123549 to 133124611 1062 + protein coding gene predicted gene, 35364
Tssr75255 7 133123853 to 133123876 23 - TSS region transcription start site region 75255
Tssr69598 7 133124018 to 133124032 14 + TSS region transcription start site region 69598
4930483O08Rik 7 133128251 to 133142457 14206 + lincRNA gene RIKEN cDNA 4930483O08 gene
Tssr75256 7 133186426 to 133186433 7 - TSS region transcription start site region 75256
Gm35567 7 133215954 to 133221529 5575 + lncRNA gene predicted gene, 35567
Tssr69599 7 133309753 to 133309755 2 + TSS region transcription start site region 69599
Gm45672 7 133319985 to 133333201 13216 - lincRNA gene predicted gene 45672
Cpgi19839 7 133377753 to 133377969 216 CpG island CpG island 19839
Gm9330 7 133408787 to 133409482 695 - pseudogene predicted gene 9330
D7Mit108 7 133472545 to 133472697 152 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 108