Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:132316893-132877966

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chst15 7 132235780 to 132317228 81448 - protein coding gene carbohydrate sulfotransferase 15
Cpgi19826 7 132315464 to 132317412 1948 CpG island CpG island 19826
Gm10584 7 132315664 to 132318291 2627 + antisense lncRNA gene predicted gene 10584
Tssr75194 7 132317063 to 132317129 66 - TSS region transcription start site region 75194
Tssr75195 7 132317138 to 132317159 21 - TSS region transcription start site region 75195
Tssr75196 7 132317164 to 132317192 28 - TSS region transcription start site region 75196
Tssr75197 7 132317198 to 132317220 22 - TSS region transcription start site region 75197
Tssr2425 7 132317245 to 132317256 11 - TSS region transcription start site region 2425
Tssr75198 7 132317258 to 132317279 21 - TSS region transcription start site region 75198
Tssr75199 7 132317305 to 132317314 9 - TSS region transcription start site region 75199
Tssr75200 7 132317367 to 132317378 11 - TSS region transcription start site region 75200
Tssr2426 7 132317392 to 132317403 11 - TSS region transcription start site region 2426
Gm44892 7 132321595 to 132322082 487 + lincRNA gene predicted gene 44892
Tssr75201 7 132323528 to 132323550 22 - TSS region transcription start site region 75201
Tssr75202 7 132323573 to 132323584 11 - TSS region transcription start site region 75202
Gm34908 7 132361375 to 132365863 4488 - lincRNA gene predicted gene, 34908
Tssr75203 7 132365859 to 132365871 12 - TSS region transcription start site region 75203
Tssr69580 7 132405966 to 132405977 11 + TSS region transcription start site region 69580
Gm39101 7 132405990 to 132417412 11422 + lncRNA gene predicted gene, 39101
Tssr69581 7 132406001 to 132406008 7 + TSS region transcription start site region 69581
Gm44893 7 132420030 to 132423713 3683 + lincRNA gene predicted gene 44893
Gm35147 7 132462012 to 132466661 4649 - lincRNA gene predicted gene, 35147
Gm46002 7 132465925 to 132466807 882 + lncRNA gene predicted gene, 46002
Gm4587 7 132483658 to 132484294 636 + pseudogene predicted gene 4587
Gm35249 7 132538240 to 132541874 3634 + lncRNA gene predicted gene, 35249
Cpgi19827 7 132551573 to 132552094 521 CpG island CpG island 19827
Oat 7 132557478 to 132576398 18920 - protein coding gene ornithine aminotransferase
Tssr69582 7 132559416 to 132559418 2 + TSS region transcription start site region 69582
Tssr75204 7 132570158 to 132570174 16 - TSS region transcription start site region 75204
Tssr75205 7 132570190 to 132570232 42 - TSS region transcription start site region 75205
Cpgi19828 7 132575654 to 132576639 985 CpG island CpG island 19828
Tssr75206 7 132576318 to 132576319 1 - TSS region transcription start site region 75206
Tssr75207 7 132576337 to 132576355 18 - TSS region transcription start site region 75207
Tssr75208 7 132576360 to 132576371 11 - TSS region transcription start site region 75208
Tssr75209 7 132576372 to 132576392 20 - TSS region transcription start site region 75209
Tssr75210 7 132589773 to 132589788 15 - TSS region transcription start site region 75210
Nkx1-2 7 132596239 to 132599637 3398 - protein coding gene NK1 homeobox 2
Cpgi19829 7 132596893 to 132597966 1073 CpG island CpG island 19829
Gm16764 7 132597387 to 132599637 2250 + antisense lncRNA gene predicted gene, 16764
Cpgi19830 7 132599388 to 132600094 706 CpG island CpG island 19830
Tssr75211 7 132599597 to 132599609 12 - TSS region transcription start site region 75211
Tssr75212 7 132599614 to 132599636 22 - TSS region transcription start site region 75212
Gm46021 7 132607618 to 132607925 307 + pseudogene predicted gene, 46021
Cpgi19831 7 132610515 to 132611032 517 CpG island CpG island 19831
Tssr69583 7 132610620 to 132610662 42 + TSS region transcription start site region 69583
Lhpp 7 132610638 to 132706420 95782 + protein coding gene phospholysine phosphohistidine inorganic pyrophosphate phosphatase
Tssr69584 7 132610685 to 132610700 15 + TSS region transcription start site region 69584
Tssr69585 7 132633905 to 132633939 34 + TSS region transcription start site region 69585
Gm15582 7 132657378 to 132659884 2506 - antisense lncRNA gene predicted gene 15582
Tssr69586 7 132664749 to 132664754 5 + TSS region transcription start site region 69586
Fam53b 7 132712084 to 132813196 101112 - protein coding gene family with sequence similarity 53, member B
Tssr75213 7 132720644 to 132720664 20 - TSS region transcription start site region 75213
Tssr75214 7 132720710 to 132720712 2 - TSS region transcription start site region 75214
Tssr75215 7 132748758 to 132748760 2 - TSS region transcription start site region 75215
Cpgi19832 7 132759391 to 132759997 606 CpG island CpG island 19832
Tssr75216 7 132762520 to 132762524 4 - TSS region transcription start site region 75216
Tssr75217 7 132771324 to 132771328 4 - TSS region transcription start site region 75217
Tssr75218 7 132776855 to 132776911 56 - TSS region transcription start site region 75218
Tssr69587 7 132782070 to 132782075 5 + TSS region transcription start site region 69587
Tssr75219 7 132786914 to 132786941 27 - TSS region transcription start site region 75219
Cpgi19833 7 132788858 to 132789037 179 CpG island CpG island 19833
D7Ertd677e 7 132799143 to 132799363 220 DNA segment DNA segment, Chr 7, ERATO Doi 677, expressed
Tssr75220 7 132808431 to 132808459 28 - TSS region transcription start site region 75220
Cpgi19834 7 132812416 to 132814209 1793 CpG island CpG island 19834
Tssr75221 7 132813134 to 132813162 28 - TSS region transcription start site region 75221
Tssr75222 7 132813164 to 132813182 18 - TSS region transcription start site region 75222
Tssr75223 7 132813651 to 132813667 16 - TSS region transcription start site region 75223
Tssr75224 7 132813680 to 132813702 22 - TSS region transcription start site region 75224
Tssr75225 7 132813715 to 132813733 18 - TSS region transcription start site region 75225
Tssr75226 7 132813774 to 132813795 21 - TSS region transcription start site region 75226
Tssr75227 7 132813799 to 132813905 106 - TSS region transcription start site region 75227
Eef1akmt2 7 132827457 to 132852673 25216 - protein coding gene EEF1A lysine methyltransferase 2
Gm45501 7 132837698 to 132840223 2525 - unclassified gene predicted gene 45501
Tssr75228 7 132845930 to 132845934 4 - TSS region transcription start site region 75228
Cpgi19835 7 132852290 to 132852784 494 CpG island CpG island 19835
Tssr75229 7 132852606 to 132852655 49 - TSS region transcription start site region 75229
Tssr75230 7 132852657 to 132852668 11 - TSS region transcription start site region 75230
Cpgi19836 7 132859087 to 132859757 670 CpG island CpG island 19836
Abraxas2 7 132859225 to 132885111 25886 + protein coding gene BRISC complex subunit
Tssr69588 7 132859238 to 132859266 28 + TSS region transcription start site region 69588
1500002F19Rik 7 132874614 to 132897571 22957 - lncRNA gene RIKEN cDNA 1500002F19 gene