MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:13149339-13290289

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm7965	7	13150477 to 13151581	1104	-	pseudogene	predicted gene 7965
Gm38946	7	13171968 to 13173057	1089	+	lncRNA gene	predicted gene, 38946
Vmn1r88	7	13177719 to 13178669	950	+	protein coding gene	vomeronasal 1 receptor, 88
Gm4879	7	13178903 to 13180174	1271	+	pseudogene	predicted pseudogene 4879
Gm38947	7	13192117 to 13197215	5098	-	lincRNA gene	predicted gene, 38947
Gm45525	7	13196629 to 13198711	2082	+	pseudogene	predicted gene 45525
Vmn1r89	7	13219339 to 13220289	950	+	protein coding gene	vomeronasal 1 receptor 89
Vmn1r-ps69	7	13244162 to 13244362	200	+	pseudogene	vomeronasal 1 receptor, pseudogene 69
Zswim9	7	13258967 to 13278721	19754	-	protein coding gene	zinc finger SWIM-type containing 9
Cpgi18338	7	13260833 to 13261773	940		CpG island	CpG island 18338
Tssr64537	7	13277155 to 13277214	59	+	TSS region	transcription start site region 64537
Tssr64538	7	13277254 to 13277270	16	+	TSS region	transcription start site region 64538
Lig1	7	13277313 to 13311427	34114	+	protein coding gene	ligase I, DNA, ATP-dependent
Cpgi18339	7	13278317 to 13279344	1027		CpG island	CpG island 18339
Tssr64539	7	13278544 to 13278565	21	+	TSS region	transcription start site region 64539
Tssr70659	7	13278661 to 13278708	47	-	TSS region	transcription start site region 70659
Tssr64540	7	13278778 to 13278874	96	+	TSS region	transcription start site region 64540
Tssr64541	7	13278876 to 13278900	24	+	TSS region	transcription start site region 64541
Tssr64542	7	13285349 to 13285371	22	+	TSS region	transcription start site region 64542