MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:131392474-131552867

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pstk	7	131371113 to 131392768	21655	+	protein coding gene	phosphoseryl-tRNA kinase
Ikzf5	7	131388649 to 131410506	21857	-	protein coding gene	IKAROS family zinc finger 5
Gm44624	7	131396258 to 131398535	2277	+	unclassified gene	predicted gene 44624
Gm44625	7	131401236 to 131402796	1560	-	unclassified gene	predicted gene 44625
Cpgi19816	7	131409778 to 131410963	1185		CpG island	CpG island 19816
Tssr75185	7	131410325 to 131410346	21	-	TSS region	transcription start site region 75185
Tssr75186	7	131410495 to 131410520	25	-	TSS region	transcription start site region 75186
Acadsb	7	131410601 to 131446211	35610	+	protein coding gene	acyl-Coenzyme A dehydrogenase, short/branched chain
Tssr69567	7	131410633 to 131410726	93	+	TSS region	transcription start site region 69567
Gm44982	7	131440471 to 131440941	470	+	sense intronic lncRNA gene	predicted gene 44982
Gm18600	7	131457012 to 131457516	504	+	pseudogene	predicted gene, 18600
Gm39099	7	131461728 to 131472218	10490	+	lncRNA gene	predicted gene, 39099
Gm44984	7	131472474 to 131472867	393	-	pseudogene	predicted gene 44984
Gm45105	7	131493507 to 131493903	396	-	pseudogene	predicted gene 45105
Cpgi19817	7	131541523 to 131544809	3286		CpG island	CpG island 19817
Hmx3	7	131542867 to 131544925	2058	+	protein coding gene	H6 homeobox 3
Tssr69568	7	131548755 to 131548761	6	+	TSS region	transcription start site region 69568
Hmx2	7	131548773 to 131558014	9241	+	protein coding gene	H6 homeobox 2
Cpgi19818	7	131552268 to 131552762	494		CpG island	CpG island 19818