Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:13011471-13252358

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr70638 7 13013874 to 13013899 25 - TSS region transcription start site region 70638
Tssr70639 7 13014240 to 13014274 34 - TSS region transcription start site region 70639
Tssr70640 7 13014282 to 13014301 19 - TSS region transcription start site region 70640
Tssr64510 7 13014744 to 13014757 13 + TSS region transcription start site region 64510
Tssr64511 7 13016850 to 13016858 8 + TSS region transcription start site region 64511
Cpgi18333 7 13023111 to 13025440 2329 CpG island CpG island 18333
Tssr70641 7 13023205 to 13023223 18 - TSS region transcription start site region 70641
Tssr64512 7 13023354 to 13023367 13 + TSS region transcription start site region 64512
Tssr64513 7 13023378 to 13023396 18 + TSS region transcription start site region 64513
Gm31649 7 13023708 to 13024678 970 - protein coding gene predicted gene, 31649
Tssr64514 7 13024120 to 13024188 68 + TSS region transcription start site region 64514
Trim28 7 13024152 to 13031032 6880 + protein coding gene tripartite motif-containing 28
Tssr64515 7 13024368 to 13024383 15 + TSS region transcription start site region 64515
Tssr64516 7 13024392 to 13024421 29 + TSS region transcription start site region 64516
Tssr64517 7 13024654 to 13024667 13 + TSS region transcription start site region 64517
Tssr64518 7 13024669 to 13024720 51 + TSS region transcription start site region 64518
Tssr64519 7 13025653 to 13025680 27 + TSS region transcription start site region 64519
Tssr64520 7 13025734 to 13025743 9 + TSS region transcription start site region 64520
Tssr64521 7 13027897 to 13027910 13 + TSS region transcription start site region 64521
Tssr64522 7 13029549 to 13029569 20 + TSS region transcription start site region 64522
Tssr64523 7 13029674 to 13029717 43 + TSS region transcription start site region 64523
Tssr64524 7 13029772 to 13029789 17 + TSS region transcription start site region 64524
Tssr64525 7 13029856 to 13029868 12 + TSS region transcription start site region 64525
Tssr64526 7 13029873 to 13029888 15 + TSS region transcription start site region 64526
Tssr64527 7 13030079 to 13030103 24 + TSS region transcription start site region 64527
Tssr64528 7 13030126 to 13030143 17 + TSS region transcription start site region 64528
Tssr64529 7 13030327 to 13030339 12 + TSS region transcription start site region 64529
Tssr64530 7 13030462 to 13030473 11 + TSS region transcription start site region 64530
Tssr64531 7 13030475 to 13030493 18 + TSS region transcription start site region 64531
Tssr64532 7 13030508 to 13030537 29 + TSS region transcription start site region 64532
Tssr64533 7 13030954 to 13030966 12 + TSS region transcription start site region 64533
Chmp2a 7 13032006 to 13034777 2771 - protein coding gene charged multivesicular body protein 2A
Tssr70642 7 13033952 to 13033965 13 - TSS region transcription start site region 70642
Tssr70643 7 13034019 to 13034036 17 - TSS region transcription start site region 70643
Tssr70644 7 13034123 to 13034146 23 - TSS region transcription start site region 70644
Cpgi18334 7 13034241 to 13035119 878 CpG island CpG island 18334
Tssr70645 7 13034401 to 13034414 13 - TSS region transcription start site region 70645
Tssr70646 7 13034604 to 13034673 69 - TSS region transcription start site region 70646
Tssr70647 7 13034703 to 13034714 11 - TSS region transcription start site region 70647
Tssr70648 7 13034722 to 13034782 60 - TSS region transcription start site region 70648
Tssr64534 7 13034864 to 13034879 15 + TSS region transcription start site region 64534
Ube2m 7 13035120 to 13038275 3155 - protein coding gene ubiquitin-conjugating enzyme E2M
Tssr70649 7 13035453 to 13035466 13 - TSS region transcription start site region 70649
Tssr70650 7 13035472 to 13035535 63 - TSS region transcription start site region 70650
Tssr70651 7 13036624 to 13036662 38 - TSS region transcription start site region 70651
Cpgi18335 7 13037339 to 13038803 1464 CpG island CpG island 18335
Tssr70652 7 13037659 to 13037667 8 - TSS region transcription start site region 70652
Tssr64535 7 13037674 to 13037700 26 + TSS region transcription start site region 64535
Tssr70653 7 13037684 to 13037692 8 - TSS region transcription start site region 70653
Tssr70654 7 13037821 to 13037832 11 - TSS region transcription start site region 70654
Tssr70655 7 13037833 to 13037951 118 - TSS region transcription start site region 70655
Tssr70656 7 13037962 to 13037969 7 - TSS region transcription start site region 70656
Tssr64536 7 13037996 to 13038047 51 + TSS region transcription start site region 64536
Tssr70657 7 13038201 to 13038307 106 - TSS region transcription start site region 70657
Tssr70658 7 13038311 to 13038322 11 - TSS region transcription start site region 70658
Mzf1 7 13042303 to 13054764 12461 - protein coding gene myeloid zinc finger 1
Cpgi18336 7 13043042 to 13044696 1654 CpG island CpG island 18336
Cpgi18337 7 13054046 to 13054950 904 CpG island CpG island 18337
Vmn1r85 7 13084289 to 13085215 926 - protein coding gene vomeronasal 1 receptor 85
Gm45436 7 13093172 to 13098674 5502 + lincRNA gene predicted gene 45436
Gm4270 7 13094992 to 13095397 405 + pseudogene predicted gene 4270
Vmn1r86 7 13101997 to 13102947 950 - protein coding gene vomeronasal 1 receptor 86
Vmn1r87 7 13131471 to 13132358 887 - protein coding gene vomeronasal 1 receptor 87
Gm7965 7 13150477 to 13151581 1104 - pseudogene predicted gene 7965
Gm38946 7 13171968 to 13173057 1089 + lncRNA gene predicted gene, 38946
Vmn1r88 7 13177719 to 13178669 950 + protein coding gene vomeronasal 1 receptor, 88
Gm4879 7 13178903 to 13180174 1271 + pseudogene predicted pseudogene 4879
Gm38947 7 13192117 to 13197215 5098 - lincRNA gene predicted gene, 38947
Gm45525 7 13196629 to 13198711 2082 + pseudogene predicted gene 45525
Vmn1r89 7 13219339 to 13220289 950 + protein coding gene vomeronasal 1 receptor 89
Vmn1r-ps69 7 13244162 to 13244362 200 + pseudogene vomeronasal 1 receptor, pseudogene 69