Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:12943212-13013232

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1810019N24Rik 7 12948592 to 12961768 13176 - lincRNA gene RIKEN cDNA 1810019N24 gene
Cpgi18324 7 12949332 to 12950118 786 CpG island CpG island 18324
Tssr64498 7 12949764 to 12949776 12 + TSS region transcription start site region 64498
Gm29638 7 12959299 to 12961887 2588 + lincRNA gene predicted gene 29638
Cpgi18325 7 12961515 to 12962071 556 CpG island CpG island 18325
Tssr70628 7 12961808 to 12961827 19 - TSS region transcription start site region 70628
Tssr64499 7 12962009 to 12962022 13 + TSS region transcription start site region 64499
Cpgi18326 7 12965713 to 12966454 741 CpG island CpG island 18326
Tssr64500 7 12965831 to 12965894 63 + TSS region transcription start site region 64500
Zfp324 7 12965838 to 12974236 8398 + protein coding gene zinc finger protein 324
Tssr64501 7 12965962 to 12965973 11 + TSS region transcription start site region 64501
Tssr64502 7 12966230 to 12966261 31 + TSS region transcription start site region 64502
Cpgi18327 7 12970751 to 12971592 841 CpG island CpG island 18327
Cpgi18328 7 12977692 to 12978530 838 CpG island CpG island 18328
Tssr64503 7 12977834 to 12977900 66 + TSS region transcription start site region 64503
Zfp446 7 12977848 to 12985714 7866 + protein coding gene zinc finger protein 446
Tssr64504 7 12978212 to 12978232 20 + TSS region transcription start site region 64504
Tssr64505 7 12978277 to 12978285 8 + TSS region transcription start site region 64505
Tssr64506 7 12978323 to 12978338 15 + TSS region transcription start site region 64506
Tssr64507 7 12978344 to 12978355 11 + TSS region transcription start site region 64507
Slc27a5 7 12988346 to 12998192 9846 - protein coding gene solute carrier family 27 (fatty acid transporter), member 5
Tssr70629 7 12991621 to 12991625 4 - TSS region transcription start site region 70629
Tssr70630 7 12997416 to 12997453 37 - TSS region transcription start site region 70630
Tssr70631 7 12997667 to 12997671 4 - TSS region transcription start site region 70631
Tssr70632 7 12998110 to 12998125 15 - TSS region transcription start site region 70632
Tssr70633 7 12998140 to 12998171 31 - TSS region transcription start site region 70633
Tssr70634 7 12998172 to 12998210 38 - TSS region transcription start site region 70634
Tssr2079 7 12999076 to 12999090 14 + TSS region transcription start site region 2079
Tssr64508 7 12999121 to 12999130 9 + TSS region transcription start site region 64508
Zbtb45 7 13005666 to 13010168 4502 - protein coding gene zinc finger and BTB domain containing 45
Cpgi18329 7 13006029 to 13006451 422 CpG island CpG island 18329
Cpgi18330 7 13006944 to 13007152 208 CpG island CpG island 18330
Cpgi18331 7 13007484 to 13008361 877 CpG island CpG island 18331
Cpgi18332 7 13009456 to 13010102 646 CpG island CpG island 18332
Tssr70635 7 13009795 to 13009856 61 - TSS region transcription start site region 70635
Tssr70636 7 13009991 to 13010031 40 - TSS region transcription start site region 70636
Tssr70637 7 13010034 to 13010054 20 - TSS region transcription start site region 70637
Tssr64509 7 13010128 to 13010135 7 + TSS region transcription start site region 64509