Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:12877888-12978907

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18319 7 12880840 to 12881677 837 CpG island CpG island 18319
Tssr64483 7 12881165 to 12881204 39 + TSS region transcription start site region 64483
Zfp128 7 12881178 to 12893422 12244 + protein coding gene zinc finger protein 128
Cpgi18320 7 12897687 to 12898154 467 CpG island CpG island 18320
Tssr64484 7 12897800 to 12897885 85 + TSS region transcription start site region 64484
Zscan22 7 12897815 to 12909083 11268 + protein coding gene zinc finger and SCAN domain containing 22
Cpgi18321 7 12910150 to 12910624 474 CpG island CpG island 18321
Cpgi18322 7 12921680 to 12922785 1105 CpG island CpG island 18322
Tssr70626 7 12922070 to 12922096 26 - TSS region transcription start site region 70626
Rps5 7 12922311 to 12926686 4375 + protein coding gene ribosomal protein S5
Tssr64485 7 12922315 to 12922320 5 + TSS region transcription start site region 64485
Tssr64486 7 12922954 to 12922972 18 + TSS region transcription start site region 64486
Tssr64487 7 12925405 to 12925428 23 + TSS region transcription start site region 64487
Tssr64488 7 12925439 to 12925455 16 + TSS region transcription start site region 64488
Tssr64489 7 12925489 to 12925504 15 + TSS region transcription start site region 64489
Tssr64490 7 12925516 to 12925530 14 + TSS region transcription start site region 64490
Tssr64491 7 12925729 to 12925742 13 + TSS region transcription start site region 64491
Tssr64492 7 12925746 to 12925770 24 + TSS region transcription start site region 64492
Tssr70627 7 12926676 to 12926688 12 - TSS region transcription start site region 70627
Tssr64493 7 12927341 to 12927350 9 + TSS region transcription start site region 64493
Tssr64494 7 12927387 to 12927402 15 + TSS region transcription start site region 64494
Tssr64495 7 12927410 to 12927439 29 + TSS region transcription start site region 64495
Rnf225 7 12927416 to 12931072 3656 + protein coding gene ring finger protein 225
Cpgi18323 7 12927888 to 12928907 1019 CpG island CpG island 18323
Tssr64496 7 12928268 to 12928300 32 + TSS region transcription start site region 64496
Tssr64497 7 12928306 to 12928328 22 + TSS region transcription start site region 64497
Gm26325 7 12930774 to 12930880 106 + snRNA gene predicted gene, 26325
1810019N24Rik 7 12948592 to 12961768 13176 - lincRNA gene RIKEN cDNA 1810019N24 gene
Cpgi18324 7 12949332 to 12950118 786 CpG island CpG island 18324
Tssr64498 7 12949764 to 12949776 12 + TSS region transcription start site region 64498
Gm29638 7 12959299 to 12961887 2588 + lincRNA gene predicted gene 29638
Cpgi18325 7 12961515 to 12962071 556 CpG island CpG island 18325
Tssr70628 7 12961808 to 12961827 19 - TSS region transcription start site region 70628
Tssr64499 7 12962009 to 12962022 13 + TSS region transcription start site region 64499
Cpgi18326 7 12965713 to 12966454 741 CpG island CpG island 18326
Tssr64500 7 12965831 to 12965894 63 + TSS region transcription start site region 64500
Zfp324 7 12965838 to 12974236 8398 + protein coding gene zinc finger protein 324
Tssr64501 7 12965962 to 12965973 11 + TSS region transcription start site region 64501
Tssr64502 7 12966230 to 12966261 31 + TSS region transcription start site region 64502
Cpgi18327 7 12970751 to 12971592 841 CpG island CpG island 18327
Cpgi18328 7 12977692 to 12978530 838 CpG island CpG island 18328
Tssr64503 7 12977834 to 12977900 66 + TSS region transcription start site region 64503
Zfp446 7 12977848 to 12985714 7866 + protein coding gene zinc finger protein 446
Tssr64504 7 12978212 to 12978232 20 + TSS region transcription start site region 64504
Tssr64505 7 12978277 to 12978285 8 + TSS region transcription start site region 64505
Tssr64506 7 12978323 to 12978338 15 + TSS region transcription start site region 64506
Tssr64507 7 12978344 to 12978355 11 + TSS region transcription start site region 64507