Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:128661841-130521852

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135 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bsbob2 7 122651440 to 129217600 6566160 QTL BSB obesity 2
Il4ppq 7 124914439 to 129217600 4303161 QTL IL-4 producing potential QTL
frzl 7 128564398 to 130321213 1756815 heritable phenotypic marker frizzy-like
Inpp5f 7 128611328 to 128696425 85097 + protein coding gene inositol polyphosphate-5-phosphatase F
Cpgi19794 7 128687456 to 128688635 1179 CpG island CpG island 19794
Tssr69438 7 128687536 to 128687579 43 + TSS region transcription start site region 69438
Tssr69439 7 128688029 to 128688047 18 + TSS region transcription start site region 69439
Tssr69440 7 128688450 to 128688472 22 + TSS region transcription start site region 69440
Tssr69441 7 128688480 to 128688500 20 + TSS region transcription start site region 69441
Gm43580 7 128688535 to 128688818 283 + pseudogene predicted gene 43580
Tssr69442 7 128688885 to 128688899 14 + TSS region transcription start site region 69442
Tssr69443 7 128689166 to 128689176 10 + TSS region transcription start site region 69443
Gm16044 7 128692689 to 128693138 449 + pseudogene predicted gene 16044
Tssr2415 7 128694243 to 128694247 4 + TSS region transcription start site region 2415
Tssr69444 7 128695600 to 128695612 12 + TSS region transcription start site region 69444
Mcmbp 7 128696441 to 128740429 43988 - protein coding gene minichromosome maintenance complex binding protein
Tssr75120 7 128697582 to 128697586 4 - TSS region transcription start site region 75120
Tssr75121 7 128717460 to 128717466 6 - TSS region transcription start site region 75121
Gm44673 7 128721049 to 128722044 995 - unclassified gene predicted gene 44673
Gm44674 7 128728394 to 128729522 1128 + antisense lncRNA gene predicted gene 44674
Gm23783 7 128734202 to 128734303 101 + snRNA gene predicted gene, 23783
Tssr75122 7 128739632 to 128739637 5 - TSS region transcription start site region 75122
Cpgi19795 7 128739668 to 128740805 1137 CpG island CpG island 19795
Tssr75123 7 128740397 to 128740410 13 - TSS region transcription start site region 75123
Tssr75124 7 128740412 to 128740423 11 - TSS region transcription start site region 75124
Tssr75125 7 128740434 to 128740470 36 - TSS region transcription start site region 75125
Tssr75126 7 128740471 to 128740525 54 - TSS region transcription start site region 75126
Gm44672 7 128744179 to 128745276 1097 - antisense lncRNA gene predicted gene 44672
Cpgi19796 7 128744606 to 128745325 719 CpG island CpG island 19796
Tssr75127 7 128744728 to 128744763 35 - TSS region transcription start site region 75127
Tssr69445 7 128744936 to 128745020 84 + TSS region transcription start site region 69445
Sec23ip 7 128744943 to 128784836 39893 + protein coding gene Sec23 interacting protein
Tssr75128 7 128745267 to 128745280 13 - TSS region transcription start site region 75128
Tssr69446 7 128748901 to 128748911 10 + TSS region transcription start site region 69446
Tssr69447 7 128748924 to 128748947 23 + TSS region transcription start site region 69447
Tssr69448 7 128748955 to 128748965 10 + TSS region transcription start site region 69448
n-R5s158 7 128774846 to 128774963 117 - rRNA gene nuclear encoded rRNA 5S 158
Gm25778 7 128826347 to 128826467 120 + miRNA gene predicted gene, 25778
Gm39093 7 128843064 to 128845369 2305 + lncRNA gene predicted gene, 39093
Cpgi19797 7 128854761 to 128854933 172 CpG island CpG island 19797
Gm32884 7 128854944 to 128906446 51502 + lincRNA gene predicted gene, 32884
Tssr69449 7 128919472 to 128919476 4 + TSS region transcription start site region 69449
D7Mit106 7 128942693 to 128942835 142 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 106
Cpgi19798 7 128997277 to 128997593 316 CpG island CpG island 19798
Gm4768 7 128997336 to 128998021 685 - pseudogene predicted gene 4768
Cpgi19799 7 128997921 to 128998153 232 CpG island CpG island 19799
Gm4259 7 129054319 to 129055076 757 - pseudogene predicted gene 4259
D7Mit104 7 129101439 to 129101574 135 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 104
D7Mit103 7 129217452 to 129217600 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 103
D7Dcr50 7 129217477 to 129217599 122 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 50
Cpgi19800 7 129256494 to 129257614 1120 CpG island CpG island 19800
Tssr69450 7 129257027 to 129257056 29 + TSS region transcription start site region 69450
Plpp4 7 129257031 to 129391412 134381 + protein coding gene phospholipid phosphatase 4
Gm33027 7 129401119 to 129403300 2181 - lincRNA gene predicted gene, 33027
Tssr75129 7 129420112 to 129420152 40 - TSS region transcription start site region 75129
Tssr75130 7 129420928 to 129420956 28 - TSS region transcription start site region 75130
D7Mit256 7 129426662 to 129426785 123 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 256
Tssr69451 7 129432431 to 129432433 2 + TSS region transcription start site region 69451
Tssr69452 7 129432467 to 129432470 3 + TSS region transcription start site region 69452
Tssr2416 7 129447373 to 129447374 1 + TSS region transcription start site region 2416
Tssr69453 7 129591524 to 129591552 28 + TSS region transcription start site region 69453
Cpgi19801 7 129591725 to 129592296 571 CpG island CpG island 19801
Tssr69454 7 129591778 to 129591784 6 + TSS region transcription start site region 69454
Tssr69455 7 129591841 to 129591852 11 + TSS region transcription start site region 69455
Tssr69456 7 129591859 to 129591871 12 + TSS region transcription start site region 69456
Wdr11 7 129591863 to 129635738 43875 + protein coding gene WD repeat domain 11
Tssr69457 7 129591897 to 129591943 46 + TSS region transcription start site region 69457
Tssr69458 7 129591979 to 129591986 7 + TSS region transcription start site region 69458
Tssr75131 7 129592423 to 129592437 14 - TSS region transcription start site region 75131
Tssr69459 7 129593598 to 129593604 6 + TSS region transcription start site region 69459
Tssr69460 7 129601531 to 129601552 21 + TSS region transcription start site region 69460
Gm33122 7 129644125 to 129658085 13960 - lncRNA gene predicted gene, 33122
Tssr75132 7 129648982 to 129648990 8 - TSS region transcription start site region 75132
Tssr75133 7 129649011 to 129649026 15 - TSS region transcription start site region 75133
Tssr75134 7 129657953 to 129657976 23 - TSS region transcription start site region 75134
Tssr75135 7 129657992 to 129658003 11 - TSS region transcription start site region 75135
Gm39094 7 129658097 to 129663062 4965 + lincRNA gene predicted gene, 39094
Tssr69461 7 129662918 to 129662921 3 + TSS region transcription start site region 69461
Gm33248 7 129667405 to 129693400 25995 + sense intronic lncRNA gene predicted gene, 33248
D7Mit165 7 129762283 to 129762408 125 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 165
Gm33398 7 129763933 to 129764651 718 - lncRNA gene predicted gene, 33398
Gm33323 7 129764778 to 129793027 28249 + lncRNA gene predicted gene, 33323
Tssr75136 7 129769838 to 129769868 30 - TSS region transcription start site region 75136
Gm39095 7 129810847 to 129823801 12954 + lncRNA gene predicted gene, 39095
Tssr69462 7 129831923 to 129831927 4 + TSS region transcription start site region 69462
Gm44778 7 129833046 to 129853779 20733 + lincRNA gene predicted gene 44778
1700102J08Rik 7 129917717 to 129924725 7008 - unclassified non-coding RNA gene RIKEN cDNA 1700102J08 gene
Femwf5 7 129950524 to 129950711 187 QTL femur work to failure 5
D7Mit44 7 129950524 to 129950711 187 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 44
D7Mit134 7 129960739 to 129960855 116 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 134
Tssr69463 7 129962162 to 129962173 11 + TSS region transcription start site region 69463
Gm4265 7 129962165 to 129978669 16504 + lincRNA gene predicted gene 4265
Tssr69464 7 130002205 to 130002209 4 + TSS region transcription start site region 69464
D7Mit135 7 130003669 to 130003807 138 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 135
Gm23847 7 130035094 to 130035203 109 + snRNA gene predicted gene, 23847
Gm39096 7 130086543 to 130094907 8364 - lncRNA gene predicted gene, 39096
Tssr75137 7 130089330 to 130089339 9 - TSS region transcription start site region 75137
Fgfr2 7 130162451 to 130266944 104493 - protein coding gene fibroblast growth factor receptor 2
Tssr75138 7 130192317 to 130192322 5 - TSS region transcription start site region 75138
Tssr75139 7 130200367 to 130200372 5 - TSS region transcription start site region 75139
Tssr75140 7 130201182 to 130201191 9 - TSS region transcription start site region 75140
Tssr75141 7 130216894 to 130216898 4 - TSS region transcription start site region 75141
Tssr75142 7 130242272 to 130242276 4 - TSS region transcription start site region 75142
Tssr75143 7 130244560 to 130244605 45 - TSS region transcription start site region 75143
Tssr69465 7 130252422 to 130252427 5 + TSS region transcription start site region 69465
Cpgi19802 7 130260928 to 130261103 175 CpG island CpG island 19802
Tssr75144 7 130262816 to 130262828 12 - TSS region transcription start site region 75144
Tssr75145 7 130264219 to 130264233 14 - TSS region transcription start site region 75145
Cpgi19803 7 130264871 to 130266756 1885 CpG island CpG island 19803
Tssr75146 7 130266216 to 130266225 9 - TSS region transcription start site region 75146
Tssr75147 7 130266237 to 130266261 24 - TSS region transcription start site region 75147
Cpgi19804 7 130273213 to 130273530 317 CpG island CpG island 19804
Gm33555 7 130273263 to 130315535 42272 - lncRNA gene predicted gene, 33555
Gm33607 7 130309652 to 130315943 6291 + lncRNA gene predicted gene, 33607
D7Mit43 7 130321003 to 130321213 210 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 43
Skts2 7 130321003 to 130321213 210 QTL skin tumor susceptibility 2
Gm33661 7 130326071 to 130340759 14688 - lncRNA gene predicted gene, 33661
Gm39097 7 130334877 to 130337404 2527 + lncRNA gene predicted gene, 39097
Gm5903 7 130352038 to 130354362 2324 - pseudogene predicted gene 5903
Tssr75148 7 130354325 to 130354354 29 - TSS region transcription start site region 75148
Gm33771 7 130374768 to 130382948 8180 - lncRNA gene predicted gene, 33771
Ate1 7 130391493 to 130520369 128876 - protein coding gene arginyltransferase 1
1700048C15Rik 7 130398328 to 130398629 301 unclassified gene RIKEN cDNA 1700048C15 gene
D7Mit107 7 130405025 to 130405170 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 107
Gm45719 7 130456012 to 130457673 1661 - unclassified gene predicted gene 45719
Tssr75149 7 130462694 to 130462705 11 - TSS region transcription start site region 75149
Tssr75150 7 130463830 to 130463845 15 - TSS region transcription start site region 75150
Tssr75151 7 130480416 to 130480464 48 - TSS region transcription start site region 75151
Tssr75152 7 130488759 to 130488769 10 - TSS region transcription start site region 75152
Tssr75153 7 130513805 to 130513829 24 - TSS region transcription start site region 75153
Cpgi19805 7 130519025 to 130520303 1278 CpG island CpG island 19805
Tssr75154 7 130519465 to 130519558 93 - TSS region transcription start site region 75154
Tssr69466 7 130519657 to 130519668 11 + TSS region transcription start site region 69466
Tssr75155 7 130519965 to 130520004 39 - TSS region transcription start site region 75155
Gm44647 7 130520845 to 130521272 427 + lincRNA gene predicted gene 44647