Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:128444943-129084836

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tial1 7 128439772 to 128461668 21896 - protein coding gene Tia1 cytotoxic granule-associated RNA binding protein-like 1
Tssr75109 7 128459722 to 128459726 4 - TSS region transcription start site region 75109
Cpgi19791 7 128460286 to 128462238 1952 CpG island CpG island 19791
Tssr75110 7 128461168 to 128461177 9 - TSS region transcription start site region 75110
Tssr2414 7 128461192 to 128461195 3 - TSS region transcription start site region 2414
Tssr75111 7 128461313 to 128461326 13 - TSS region transcription start site region 75111
Tssr75112 7 128461327 to 128461387 60 - TSS region transcription start site region 75112
Tssr75113 7 128461389 to 128461400 11 - TSS region transcription start site region 75113
Tssr75114 7 128461549 to 128461560 11 - TSS region transcription start site region 75114
Tssr75115 7 128461579 to 128461622 43 - TSS region transcription start site region 75115
Tssr75116 7 128461630 to 128461662 32 - TSS region transcription start site region 75116
Tssr69425 7 128461937 to 128461974 37 + TSS region transcription start site region 69425
Gm32816 7 128462068 to 128475571 13503 + lncRNA gene predicted gene, 32816
Gm24365 7 128478014 to 128478138 124 - miRNA gene predicted gene, 24365
Gm40457 7 128493822 to 128499847 6025 - lincRNA gene predicted gene, 40457
Tssr75117 7 128499831 to 128499834 3 - TSS region transcription start site region 75117
4921520J07Rik 7 128522562 to 128523147 585 unclassified gene RIKEN cDNA 4921520J07 gene
Tssr69426 7 128523261 to 128523270 9 + TSS region transcription start site region 69426
Cpgi19792 7 128523307 to 128524469 1162 CpG island CpG island 19792
Tssr75118 7 128523450 to 128523458 8 - TSS region transcription start site region 75118
Tssr69427 7 128523576 to 128523598 22 + TSS region transcription start site region 69427
Tssr69428 7 128523615 to 128523647 32 + TSS region transcription start site region 69428
Bag3 7 128523616 to 128546981 23365 + protein coding gene BCL2-associated athanogene 3
Tssr69429 7 128523648 to 128523667 19 + TSS region transcription start site region 69429
Tssr69430 7 128523729 to 128523734 5 + TSS region transcription start site region 69430
Tssr69431 7 128523762 to 128523782 20 + TSS region transcription start site region 69431
2610306O10Rik 7 128538932 to 128539543 611 + unclassified gene RIKEN cDNA 2610306O10 gene
Tssr69432 7 128540027 to 128540053 26 + TSS region transcription start site region 69432
Tssr75119 7 128540067 to 128540112 45 - TSS region transcription start site region 75119
Tssr69433 7 128540110 to 128540132 22 + TSS region transcription start site region 69433
Tssr69434 7 128541908 to 128541911 3 + TSS region transcription start site region 69434
Tssr69435 7 128542362 to 128542373 11 + TSS region transcription start site region 69435
Sluc19 7 128564398 to 128564655 257 QTL susceptibility to lung cancer 19
Alcp14 7 128564398 to 128564655 257 QTL alcohol preference locus 14, female specific
Alcp12 7 128564398 to 128564655 257 QTL alcohol preference locus 12, male specific
D7Mit105 7 128564398 to 128564655 257 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 105
frzl 7 128564398 to 130321213 1756815 heritable phenotypic marker frizzy-like
Gm45121 7 128590926 to 128593343 2417 - lincRNA gene predicted gene 45121
Gm7258 7 128595979 to 128596278 299 - pseudogene predicted gene 7258
Cpgi19793 7 128611076 to 128612028 952 CpG island CpG island 19793
Inpp5f 7 128611328 to 128696425 85097 + protein coding gene inositol polyphosphate-5-phosphatase F
Tssr69436 7 128611363 to 128611416 53 + TSS region transcription start site region 69436
Tssr69437 7 128638583 to 128638587 4 + TSS region transcription start site region 69437
Cpgi19794 7 128687456 to 128688635 1179 CpG island CpG island 19794
Tssr69438 7 128687536 to 128687579 43 + TSS region transcription start site region 69438
Tssr69439 7 128688029 to 128688047 18 + TSS region transcription start site region 69439
Tssr69440 7 128688450 to 128688472 22 + TSS region transcription start site region 69440
Tssr69441 7 128688480 to 128688500 20 + TSS region transcription start site region 69441
Gm43580 7 128688535 to 128688818 283 + pseudogene predicted gene 43580
Tssr69442 7 128688885 to 128688899 14 + TSS region transcription start site region 69442
Tssr69443 7 128689166 to 128689176 10 + TSS region transcription start site region 69443
Gm16044 7 128692689 to 128693138 449 + pseudogene predicted gene 16044
Tssr2415 7 128694243 to 128694247 4 + TSS region transcription start site region 2415
Tssr69444 7 128695600 to 128695612 12 + TSS region transcription start site region 69444
Mcmbp 7 128696441 to 128740429 43988 - protein coding gene minichromosome maintenance complex binding protein
Tssr75120 7 128697582 to 128697586 4 - TSS region transcription start site region 75120
Tssr75121 7 128717460 to 128717466 6 - TSS region transcription start site region 75121
Gm44673 7 128721049 to 128722044 995 - unclassified gene predicted gene 44673
Gm44674 7 128728394 to 128729522 1128 + antisense lncRNA gene predicted gene 44674
Gm23783 7 128734202 to 128734303 101 + snRNA gene predicted gene, 23783
Tssr75122 7 128739632 to 128739637 5 - TSS region transcription start site region 75122
Cpgi19795 7 128739668 to 128740805 1137 CpG island CpG island 19795
Tssr75123 7 128740397 to 128740410 13 - TSS region transcription start site region 75123
Tssr75124 7 128740412 to 128740423 11 - TSS region transcription start site region 75124
Tssr75125 7 128740434 to 128740470 36 - TSS region transcription start site region 75125
Tssr75126 7 128740471 to 128740525 54 - TSS region transcription start site region 75126
Gm44672 7 128744179 to 128745276 1097 - antisense lncRNA gene predicted gene 44672
Cpgi19796 7 128744606 to 128745325 719 CpG island CpG island 19796
Tssr75127 7 128744728 to 128744763 35 - TSS region transcription start site region 75127
Tssr69445 7 128744936 to 128745020 84 + TSS region transcription start site region 69445
Sec23ip 7 128744943 to 128784836 39893 + protein coding gene Sec23 interacting protein
Tssr75128 7 128745267 to 128745280 13 - TSS region transcription start site region 75128
Tssr69446 7 128748901 to 128748911 10 + TSS region transcription start site region 69446
Tssr69447 7 128748924 to 128748947 23 + TSS region transcription start site region 69447
Tssr69448 7 128748955 to 128748965 10 + TSS region transcription start site region 69448
n-R5s158 7 128774846 to 128774963 117 - rRNA gene nuclear encoded rRNA 5S 158
Gm25778 7 128826347 to 128826467 120 + miRNA gene predicted gene, 25778
Gm39093 7 128843064 to 128845369 2305 + lncRNA gene predicted gene, 39093
Cpgi19797 7 128854761 to 128854933 172 CpG island CpG island 19797
Gm32884 7 128854944 to 128906446 51502 + lincRNA gene predicted gene, 32884
Tssr69449 7 128919472 to 128919476 4 + TSS region transcription start site region 69449
D7Mit106 7 128942693 to 128942835 142 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 106
Cpgi19798 7 128997277 to 128997593 316 CpG island CpG island 19798
Gm4768 7 128997336 to 128998021 685 - pseudogene predicted gene 4768
Cpgi19799 7 128997921 to 128998153 232 CpG island CpG island 19799
Gm4259 7 129054319 to 129055076 757 - pseudogene predicted gene 4259