Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:128172391-128302401

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itgad 7 128173933 to 128205504 31571 + protein coding gene integrin, alpha D
Tssr69401 7 128173944 to 128173981 37 + TSS region transcription start site region 69401
Gm39091 7 128182379 to 128184096 1717 - antisense lncRNA gene predicted gene, 39091
Tssr69402 7 128188555 to 128188557 2 + TSS region transcription start site region 69402
4931431B13Rik 7 128192050 to 128203328 11278 - lncRNA gene RIKEN cDNA 4931431B13 gene
Tssr75078 7 128203309 to 128203317 8 - TSS region transcription start site region 75078
Tssr75079 7 128203319 to 128203332 13 - TSS region transcription start site region 75079
Tssr69403 7 128203397 to 128203404 7 + TSS region transcription start site region 69403
Tssr69404 7 128203421 to 128203431 10 + TSS region transcription start site region 69404
Tssr69405 7 128203598 to 128203607 9 + TSS region transcription start site region 69405
Cox6a2 7 128205435 to 128206366 931 - protein coding gene cytochrome c oxidase subunit 6A2
Cpgi19784 7 128205723 to 128206061 338 CpG island CpG island 19784
Tssr2412 7 128205771 to 128205794 23 + TSS region transcription start site region 2412
Tssr69406 7 128205893 to 128205922 29 + TSS region transcription start site region 69406
Tssr75080 7 128205922 to 128205937 15 - TSS region transcription start site region 75080
Tssr75081 7 128205971 to 128206005 34 - TSS region transcription start site region 75081
Tssr75082 7 128206018 to 128206027 9 - TSS region transcription start site region 75082
Tssr75083 7 128206293 to 128206337 44 - TSS region transcription start site region 75083
Tssr75084 7 128206346 to 128206359 13 - TSS region transcription start site region 75084
Tssr75085 7 128206440 to 128206451 11 - TSS region transcription start site region 75085
Gm44850 7 128215616 to 128220788 5172 - antisense lncRNA gene predicted gene 44850
Tssr75086 7 128220868 to 128220879 11 - TSS region transcription start site region 75086
Tssr75087 7 128220890 to 128220914 24 - TSS region transcription start site region 75087
9130023H24Rik 7 128234458 to 128238031 3573 - protein coding gene RIKEN cDNA 9130023H24 gene
Tssr75088 7 128236031 to 128236036 5 - TSS region transcription start site region 75088
Cpgi19785 7 128237109 to 128238718 1609 CpG island CpG island 19785
Tssr69407 7 128237284 to 128237329 45 + TSS region transcription start site region 69407
Tssr69408 7 128237330 to 128237387 57 + TSS region transcription start site region 69408
Armc5 7 128237357 to 128245100 7743 + protein coding gene armadillo repeat containing 5
Tssr69409 7 128237391 to 128237401 10 + TSS region transcription start site region 69409
Tssr69410 7 128237511 to 128237554 43 + TSS region transcription start site region 69410
Tssr75089 7 128237984 to 128237995 11 - TSS region transcription start site region 75089
Tssr69411 7 128238092 to 128238123 31 + TSS region transcription start site region 69411
Tgfb1i1 7 128246812 to 128255699 8887 + protein coding gene transforming growth factor beta 1 induced transcript 1
Tssr69412 7 128246937 to 128246948 11 + TSS region transcription start site region 69412
Cpgi19786 7 128246947 to 128247217 270 CpG island CpG island 19786
Tssr69413 7 128246953 to 128246993 40 + TSS region transcription start site region 69413
Cpgi19787 7 128252640 to 128253360 720 CpG island CpG island 19787
Tssr69414 7 128252796 to 128252810 14 + TSS region transcription start site region 69414
Tssr69415 7 128265675 to 128265690 15 + TSS region transcription start site region 69415
Slc5a2 7 128265697 to 128272433 6736 + protein coding gene solute carrier family 5 (sodium/glucose cotransporter), member 2
Tssr69416 7 128266326 to 128266335 9 + TSS region transcription start site region 69416
Tssr69417 7 128266337 to 128266348 11 + TSS region transcription start site region 69417
Tssr2413 7 128266351 to 128266356 5 + TSS region transcription start site region 2413
Tssr69418 7 128266363 to 128266374 11 + TSS region transcription start site region 69418
Cpgi19788 7 128270780 to 128271172 392 CpG island CpG island 19788
BC017158 7 128271379 to 128298165 26786 - protein coding gene cDNA sequence BC017158
Tssr75090 7 128271678 to 128271719 41 - TSS region transcription start site region 75090
Tssr75091 7 128276081 to 128276086 5 - TSS region transcription start site region 75091
Mir3103 7 128288369 to 128288435 66 - miRNA gene microRNA 3103
Tssr75092 7 128289086 to 128289091 5 - TSS region transcription start site region 75092
Cpgi19789 7 128297477 to 128298250 773 CpG island CpG island 19789
Tssr75093 7 128298081 to 128298138 57 - TSS region transcription start site region 75093