Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:127991919-128291960

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142 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pycard 7 127991373 to 127993867 2494 - protein coding gene PYD and CARD domain containing
Tssr75072 7 127993170 to 127993185 15 - TSS region transcription start site region 75072
Gm45205 7 127993269 to 127996598 3329 + unclassified gene predicted gene 45205
Tssr75073 7 127993702 to 127993762 60 - TSS region transcription start site region 75073
Tssr75074 7 127993831 to 127993845 14 - TSS region transcription start site region 75074
Gm15533 7 128001899 to 128005190 3291 - antisense lncRNA gene predicted gene 15533
Tssr69332 7 128003889 to 128003896 7 + TSS region transcription start site region 69332
Tssr69333 7 128003911 to 128004002 91 + TSS region transcription start site region 69333
Trim72 7 128003949 to 128011033 7084 + protein coding gene tripartite motif-containing 72
Cpgi19781 7 128004508 to 128004959 451 CpG island CpG island 19781
Tssr69334 7 128004549 to 128004582 33 + TSS region transcription start site region 69334
Tssr75075 7 128005152 to 128005168 16 - TSS region transcription start site region 75075
Cpgi19782 7 128009822 to 128010465 643 CpG island CpG island 19782
Gm19366 7 128013029 to 128013184 155 - pseudogene predicted gene, 19366
Gm5738 7 128016442 to 128017220 778 - pseudogene predicted gene 5738
Gm9299 7 128041254 to 128042390 1136 - pseudogene predicted gene 9299
Gm22809 7 128061705 to 128061860 155 - snRNA gene predicted gene, 22809
Tssr69335 7 128062635 to 128062646 11 + TSS region transcription start site region 69335
Itgam 7 128062640 to 128118491 55851 + protein coding gene integrin alpha M
Tssr69336 7 128062657 to 128062687 30 + TSS region transcription start site region 69336
Gm49368 7 128062683 to 128128160 65477 + protein coding gene predicted gene, 49368
Tssr69337 7 128062694 to 128062697 3 + TSS region transcription start site region 69337
Tssr69338 7 128062698 to 128062730 32 + TSS region transcription start site region 69338
Tssr69339 7 128063726 to 128063740 14 + TSS region transcription start site region 69339
Tssr69340 7 128064781 to 128064799 18 + TSS region transcription start site region 69340
Tssr69341 7 128068104 to 128068138 34 + TSS region transcription start site region 69341
Tssr69342 7 128068592 to 128068633 41 + TSS region transcription start site region 69342
Tssr69343 7 128070156 to 128070160 4 + TSS region transcription start site region 69343
Tssr69344 7 128070618 to 128070631 13 + TSS region transcription start site region 69344
Tssr69345 7 128070656 to 128070679 23 + TSS region transcription start site region 69345
Tssr69346 7 128070910 to 128070926 16 + TSS region transcription start site region 69346
Tssr69347 7 128076159 to 128076182 23 + TSS region transcription start site region 69347
Tssr69348 7 128076188 to 128076200 12 + TSS region transcription start site region 69348
Tssr69349 7 128077772 to 128077775 3 + TSS region transcription start site region 69349
Tssr69350 7 128077818 to 128077826 8 + TSS region transcription start site region 69350
Tssr69351 7 128081633 to 128081646 13 + TSS region transcription start site region 69351
Tssr69352 7 128082628 to 128082647 19 + TSS region transcription start site region 69352
Tssr69353 7 128083673 to 128083687 14 + TSS region transcription start site region 69353
Tssr69354 7 128083899 to 128083913 14 + TSS region transcription start site region 69354
Tssr69355 7 128107682 to 128107695 13 + TSS region transcription start site region 69355
Tssr69356 7 128112968 to 128112989 21 + TSS region transcription start site region 69356
Tssr69357 7 128113203 to 128113215 12 + TSS region transcription start site region 69357
Tssr69358 7 128113247 to 128113268 21 + TSS region transcription start site region 69358
Tssr69359 7 128116040 to 128116062 22 + TSS region transcription start site region 69359
Tssr69360 7 128116281 to 128116289 8 + TSS region transcription start site region 69360
Tssr69361 7 128116799 to 128116824 25 + TSS region transcription start site region 69361
Tssr69362 7 128117312 to 128117323 11 + TSS region transcription start site region 69362
Tssr69363 7 128117342 to 128117394 52 + TSS region transcription start site region 69363
Tssr69364 7 128117396 to 128117439 43 + TSS region transcription start site region 69364
Tssr69365 7 128117440 to 128117474 34 + TSS region transcription start site region 69365
Tssr69366 7 128117748 to 128117759 11 + TSS region transcription start site region 69366
Tssr69367 7 128117787 to 128117798 11 + TSS region transcription start site region 69367
Tssr69368 7 128117818 to 128117821 3 + TSS region transcription start site region 69368
Tssr69369 7 128117828 to 128117848 20 + TSS region transcription start site region 69369
Tssr69370 7 128117853 to 128117864 11 + TSS region transcription start site region 69370
Tssr69371 7 128117909 to 128117916 7 + TSS region transcription start site region 69371
Tssr69372 7 128117987 to 128117996 9 + TSS region transcription start site region 69372
Tssr69373 7 128118017 to 128118045 28 + TSS region transcription start site region 69373
Tssr69374 7 128118066 to 128118087 21 + TSS region transcription start site region 69374
Tssr69375 7 128118136 to 128118150 14 + TSS region transcription start site region 69375
Tssr69376 7 128118162 to 128118175 13 + TSS region transcription start site region 69376
Tssr69377 7 128118184 to 128118210 26 + TSS region transcription start site region 69377
Tssr69378 7 128126792 to 128126796 4 + TSS region transcription start site region 69378
Gm45700 7 128126835 to 128127181 346 + pseudogene predicted gene 45700
Tssr69379 7 128129536 to 128129574 38 + TSS region transcription start site region 69379
Itgax 7 128129547 to 128150657 21110 + protein coding gene integrin alpha X
Tssr69380 7 128131490 to 128131514 24 + TSS region transcription start site region 69380
Tssr69381 7 128132951 to 128133010 59 + TSS region transcription start site region 69381
Tssr69382 7 128134750 to 128134776 26 + TSS region transcription start site region 69382
Tssr69383 7 128134778 to 128134817 39 + TSS region transcription start site region 69383
Tssr69384 7 128134841 to 128134852 11 + TSS region transcription start site region 69384
Tssr69385 7 128134854 to 128134859 5 + TSS region transcription start site region 69385
Tssr69386 7 128138390 to 128138414 24 + TSS region transcription start site region 69386
Tssr69387 7 128139153 to 128139155 2 + TSS region transcription start site region 69387
Tssr69388 7 128139259 to 128139270 11 + TSS region transcription start site region 69388
Tssr75076 7 128140284 to 128140320 36 - TSS region transcription start site region 75076
Tssr69389 7 128140461 to 128140472 11 + TSS region transcription start site region 69389
Tssr69390 7 128141207 to 128141219 12 + TSS region transcription start site region 69390
Tssr69391 7 128141919 to 128141960 41 + TSS region transcription start site region 69391
Tssr69392 7 128144607 to 128144626 19 + TSS region transcription start site region 69392
Tssr69393 7 128144658 to 128144683 25 + TSS region transcription start site region 69393
Tssr69394 7 128144842 to 128144857 15 + TSS region transcription start site region 69394
Tssr69395 7 128146076 to 128146081 5 + TSS region transcription start site region 69395
Tssr69396 7 128147419 to 128147468 49 + TSS region transcription start site region 69396
Tssr69397 7 128148056 to 128148070 14 + TSS region transcription start site region 69397
Tssr69398 7 128148493 to 128148510 17 + TSS region transcription start site region 69398
Tssr69399 7 128149166 to 128149179 13 + TSS region transcription start site region 69399
Tssr69400 7 128150179 to 128150203 24 + TSS region transcription start site region 69400
Tssr75077 7 128150651 to 128150658 7 - TSS region transcription start site region 75077
Gm17831 7 128154019 to 128154918 899 + pseudogene predicted gene, 17831
Cpgi19783 7 128154130 to 128154419 289 CpG island CpG island 19783
Itgad 7 128173933 to 128205504 31571 + protein coding gene integrin, alpha D
Tssr69401 7 128173944 to 128173981 37 + TSS region transcription start site region 69401
Gm39091 7 128182379 to 128184096 1717 - antisense lncRNA gene predicted gene, 39091
Tssr69402 7 128188555 to 128188557 2 + TSS region transcription start site region 69402
4931431B13Rik 7 128192050 to 128203328 11278 - lncRNA gene RIKEN cDNA 4931431B13 gene
Tssr75078 7 128203309 to 128203317 8 - TSS region transcription start site region 75078
Tssr75079 7 128203319 to 128203332 13 - TSS region transcription start site region 75079
Tssr69403 7 128203397 to 128203404 7 + TSS region transcription start site region 69403
Tssr69404 7 128203421 to 128203431 10 + TSS region transcription start site region 69404
Tssr69405 7 128203598 to 128203607 9 + TSS region transcription start site region 69405
Cox6a2 7 128205435 to 128206366 931 - protein coding gene cytochrome c oxidase subunit 6A2
Cpgi19784 7 128205723 to 128206061 338 CpG island CpG island 19784
Tssr2412 7 128205771 to 128205794 23 + TSS region transcription start site region 2412
Tssr69406 7 128205893 to 128205922 29 + TSS region transcription start site region 69406
Tssr75080 7 128205922 to 128205937 15 - TSS region transcription start site region 75080
Tssr75081 7 128205971 to 128206005 34 - TSS region transcription start site region 75081
Tssr75082 7 128206018 to 128206027 9 - TSS region transcription start site region 75082
Tssr75083 7 128206293 to 128206337 44 - TSS region transcription start site region 75083
Tssr75084 7 128206346 to 128206359 13 - TSS region transcription start site region 75084
Tssr75085 7 128206440 to 128206451 11 - TSS region transcription start site region 75085
Gm44850 7 128215616 to 128220788 5172 - antisense lncRNA gene predicted gene 44850
Tssr75086 7 128220868 to 128220879 11 - TSS region transcription start site region 75086
Tssr75087 7 128220890 to 128220914 24 - TSS region transcription start site region 75087
9130023H24Rik 7 128234458 to 128238031 3573 - protein coding gene RIKEN cDNA 9130023H24 gene
Tssr75088 7 128236031 to 128236036 5 - TSS region transcription start site region 75088
Cpgi19785 7 128237109 to 128238718 1609 CpG island CpG island 19785
Tssr69407 7 128237284 to 128237329 45 + TSS region transcription start site region 69407
Tssr69408 7 128237330 to 128237387 57 + TSS region transcription start site region 69408
Armc5 7 128237357 to 128245100 7743 + protein coding gene armadillo repeat containing 5
Tssr69409 7 128237391 to 128237401 10 + TSS region transcription start site region 69409
Tssr69410 7 128237511 to 128237554 43 + TSS region transcription start site region 69410
Tssr75089 7 128237984 to 128237995 11 - TSS region transcription start site region 75089
Tssr69411 7 128238092 to 128238123 31 + TSS region transcription start site region 69411
Tgfb1i1 7 128246812 to 128255699 8887 + protein coding gene transforming growth factor beta 1 induced transcript 1
Tssr69412 7 128246937 to 128246948 11 + TSS region transcription start site region 69412
Cpgi19786 7 128246947 to 128247217 270 CpG island CpG island 19786
Tssr69413 7 128246953 to 128246993 40 + TSS region transcription start site region 69413
Cpgi19787 7 128252640 to 128253360 720 CpG island CpG island 19787
Tssr69414 7 128252796 to 128252810 14 + TSS region transcription start site region 69414
Tssr69415 7 128265675 to 128265690 15 + TSS region transcription start site region 69415
Slc5a2 7 128265697 to 128272433 6736 + protein coding gene solute carrier family 5 (sodium/glucose cotransporter), member 2
Tssr69416 7 128266326 to 128266335 9 + TSS region transcription start site region 69416
Tssr69417 7 128266337 to 128266348 11 + TSS region transcription start site region 69417
Tssr2413 7 128266351 to 128266356 5 + TSS region transcription start site region 2413
Tssr69418 7 128266363 to 128266374 11 + TSS region transcription start site region 69418
Cpgi19788 7 128270780 to 128271172 392 CpG island CpG island 19788
BC017158 7 128271379 to 128298165 26786 - protein coding gene cDNA sequence BC017158
Tssr75090 7 128271678 to 128271719 41 - TSS region transcription start site region 75090
Tssr75091 7 128276081 to 128276086 5 - TSS region transcription start site region 75091
Mir3103 7 128288369 to 128288435 66 - miRNA gene microRNA 3103
Tssr75092 7 128289086 to 128289091 5 - TSS region transcription start site region 75092