Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:127772465-127912488

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Orai3 7 127769815 to 127775150 5335 + protein coding gene ORAI calcium release-activated calcium modulator 3
Cpgi19767 7 127776447 to 127778326 1879 CpG island CpG island 19767
Setd1a 7 127776670 to 127800122 23452 + protein coding gene SET domain containing 1A
Tssr69288 7 127777095 to 127777152 57 + TSS region transcription start site region 69288
Tssr69289 7 127777315 to 127777367 52 + TSS region transcription start site region 69289
Tssr69290 7 127777376 to 127777413 37 + TSS region transcription start site region 69290
Tssr75034 7 127777734 to 127777770 36 - TSS region transcription start site region 75034
Tssr69291 7 127784029 to 127784050 21 + TSS region transcription start site region 69291
Gm49388 7 127785608 to 127803802 18194 + protein coding gene predicted gene, 49388
Cpgi19768 7 127799050 to 127799281 231 CpG island CpG island 19768
9430064I24Rik 7 127800094 to 127802762 2668 - unclassified gene RIKEN cDNA 9430064I24 gene
Hsd3b7 7 127800604 to 127803802 3198 + protein coding gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
Tssr69292 7 127800608 to 127800615 7 + TSS region transcription start site region 69292
Tssr69293 7 127800623 to 127800696 73 + TSS region transcription start site region 69293
Tssr69294 7 127800711 to 127800719 8 + TSS region transcription start site region 69294
Tssr69295 7 127800844 to 127800849 5 + TSS region transcription start site region 69295
Cpgi19769 7 127802415 to 127802604 189 CpG island CpG island 19769
Stx1b 7 127803900 to 127824531 20631 - protein coding gene syntaxin 1B
Tssr75035 7 127806626 to 127806637 11 - TSS region transcription start site region 75035
Tssr75036 7 127806959 to 127806992 33 - TSS region transcription start site region 75036
Tssr75037 7 127807017 to 127807034 17 - TSS region transcription start site region 75037
Tssr75038 7 127807245 to 127807268 23 - TSS region transcription start site region 75038
Tssr75039 7 127807299 to 127807330 31 - TSS region transcription start site region 75039
Tssr75040 7 127810934 to 127810951 17 - TSS region transcription start site region 75040
Gm45204 7 127812154 to 127813507 1353 - unclassified gene predicted gene 45204
Cpgi19770 7 127824219 to 127824716 497 CpG island CpG island 19770
Tssr75041 7 127824469 to 127824580 111 - TSS region transcription start site region 75041
Tssr75042 7 127824765 to 127824777 12 - TSS region transcription start site region 75042
Tssr75043 7 127824836 to 127824849 13 - TSS region transcription start site region 75043
Stx4a 7 127840643 to 127850988 10345 + protein coding gene syntaxin 4A (placental)
Cpgi19771 7 127840905 to 127842611 1706 CpG island CpG island 19771
Tssr69296 7 127840997 to 127841018 21 + TSS region transcription start site region 69296
Tssr75044 7 127841473 to 127841481 8 - TSS region transcription start site region 75044
Tssr69297 7 127841700 to 127841743 43 + TSS region transcription start site region 69297
Tssr69298 7 127841752 to 127841803 51 + TSS region transcription start site region 69298
Tssr69299 7 127841817 to 127841847 30 + TSS region transcription start site region 69299
Tssr69300 7 127841857 to 127841865 8 + TSS region transcription start site region 69300
Tssr69301 7 127841866 to 127841880 14 + TSS region transcription start site region 69301
Tssr69302 7 127841904 to 127841933 29 + TSS region transcription start site region 69302
Tssr69303 7 127841947 to 127841962 15 + TSS region transcription start site region 69303
Tssr75045 7 127842465 to 127842488 23 - TSS region transcription start site region 75045
Tssr69304 7 127848387 to 127848398 11 + TSS region transcription start site region 69304
Tssr69305 7 127848878 to 127848917 39 + TSS region transcription start site region 69305
Tssr75046 7 127848952 to 127848968 16 - TSS region transcription start site region 75046
Tssr75047 7 127850984 to 127851003 19 - TSS region transcription start site region 75047
Zfp668 7 127863047 to 127876828 13781 - protein coding gene zinc finger protein 668
Cpgi19772 7 127866751 to 127867181 430 CpG island CpG island 19772
Tssr75048 7 127874967 to 127874971 4 - TSS region transcription start site region 75048
Cpgi19773 7 127875330 to 127877393 2063 CpG island CpG island 19773
Tssr75049 7 127875613 to 127875623 10 - TSS region transcription start site region 75049
Tssr75050 7 127875633 to 127875673 40 - TSS region transcription start site region 75050
Tssr69306 7 127875742 to 127875758 16 + TSS region transcription start site region 69306
Tssr69307 7 127875831 to 127875851 20 + TSS region transcription start site region 69307
Tssr69308 7 127875925 to 127875948 23 + TSS region transcription start site region 69308
Tssr75051 7 127876100 to 127876152 52 - TSS region transcription start site region 75051
Tssr69309 7 127876170 to 127876254 84 + TSS region transcription start site region 69309
Tssr75052 7 127876546 to 127876610 64 - TSS region transcription start site region 75052
Zfp646 7 127876805 to 127885996 9191 + protein coding gene zinc finger protein 646
Tssr75053 7 127876810 to 127876854 44 - TSS region transcription start site region 75053
Tssr69310 7 127876898 to 127876919 21 + TSS region transcription start site region 69310
Tssr69311 7 127876924 to 127876954 30 + TSS region transcription start site region 69311
Tssr69312 7 127876955 to 127876971 16 + TSS region transcription start site region 69312
Tssr69313 7 127877130 to 127877145 15 + TSS region transcription start site region 69313
Tssr69314 7 127877146 to 127877174 28 + TSS region transcription start site region 69314
Prss53 7 127885841 to 127890970 5129 - protein coding gene protease, serine 53
Gm21974 7 127886227 to 127895454 9227 - protein coding gene predicted gene 21974
Tssr75054 7 127890918 to 127890953 35 - TSS region transcription start site region 75054
Tssr2409 7 127890968 to 127890972 4 - TSS region transcription start site region 2409
Vkorc1 7 127893063 to 127895617 2554 - protein coding gene vitamin K epoxide reductase complex, subunit 1
Tssr75055 7 127893449 to 127893456 7 - TSS region transcription start site region 75055
Tssr75056 7 127893464 to 127893481 17 - TSS region transcription start site region 75056
Tssr75057 7 127894636 to 127894664 28 - TSS region transcription start site region 75057
Tssr75058 7 127894678 to 127894687 9 - TSS region transcription start site region 75058
Cpgi19774 7 127895303 to 127895795 492 CpG island CpG island 19774
Tssr75059 7 127895578 to 127895647 69 - TSS region transcription start site region 75059
2200002A13Rik 7 127897568 to 127898276 708 + unclassified gene RIKEN cDNA 2200002A13 gene
Tssr75060 7 127898445 to 127898452 7 - TSS region transcription start site region 75060
Cpgi19775 7 127903926 to 127904392 466 CpG island CpG island 19775
Tssr69315 7 127904055 to 127904066 11 + TSS region transcription start site region 69315
Bckdk 7 127904073 to 127909664 5591 + protein coding gene branched chain ketoacid dehydrogenase kinase
Tssr69316 7 127904079 to 127904125 46 + TSS region transcription start site region 69316
Tssr69317 7 127904354 to 127904367 13 + TSS region transcription start site region 69317
Tssr69318 7 127904824 to 127904839 15 + TSS region transcription start site region 69318
Cpgi19776 7 127912310 to 127912833 523 CpG island CpG island 19776