Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:127445085-127595090

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp689 7 127442136 to 127449158 7022 - protein coding gene zinc finger protein 689
Cpgi19749 7 127448531 to 127449301 770 CpG island CpG island 19749
Tssr75002 7 127448613 to 127448660 47 - TSS region transcription start site region 75002
Tssr69207 7 127448626 to 127448644 18 + TSS region transcription start site region 69207
B130055M24Rik 7 127448636 to 127460360 11724 + lncRNA gene RIKEN cDNA B130055M24 gene
Tssr69208 7 127448656 to 127448707 51 + TSS region transcription start site region 69208
Tssr75003 7 127449060 to 127449077 17 - TSS region transcription start site region 75003
Tssr75004 7 127449109 to 127449166 57 - TSS region transcription start site region 75004
Gm45110 7 127455469 to 127456870 1401 + unclassified gene predicted gene 45110
Prr14 7 127465025 to 127476767 11742 + protein coding gene proline rich 14
Tssr69209 7 127470354 to 127470370 16 + TSS region transcription start site region 69209
Tssr75005 7 127470862 to 127470899 37 - TSS region transcription start site region 75005
Tssr69210 7 127470991 to 127471006 15 + TSS region transcription start site region 69210
Tssr69211 7 127471009 to 127471036 27 + TSS region transcription start site region 69211
Tssr69212 7 127471043 to 127471054 11 + TSS region transcription start site region 69212
Tssr69213 7 127471088 to 127471098 10 + TSS region transcription start site region 69213
Tssr69214 7 127471355 to 127471368 13 + TSS region transcription start site region 69214
Tssr69215 7 127471459 to 127471483 24 + TSS region transcription start site region 69215
Tssr69216 7 127471484 to 127471551 67 + TSS region transcription start site region 69216
Cpgi19750 7 127471554 to 127472221 667 CpG island CpG island 19750
Tssr69217 7 127471599 to 127471628 29 + TSS region transcription start site region 69217
Tssr69218 7 127471709 to 127471724 15 + TSS region transcription start site region 69218
Tssr69219 7 127475115 to 127475128 13 + TSS region transcription start site region 69219
Tssr69220 7 127475201 to 127475217 16 + TSS region transcription start site region 69220
Cpgi19751 7 127477567 to 127479941 2374 CpG island CpG island 19751
Tssr2406 7 127478158 to 127478195 37 + TSS region transcription start site region 2406
Tssr69221 7 127478207 to 127478256 49 + TSS region transcription start site region 69221
Tssr69222 7 127478494 to 127478549 55 + TSS region transcription start site region 69222
Tssr69223 7 127478553 to 127478563 10 + TSS region transcription start site region 69223
Tssr69224 7 127478796 to 127478839 43 + TSS region transcription start site region 69224
Tssr69225 7 127478843 to 127478874 31 + TSS region transcription start site region 69225
Tssr69226 7 127478943 to 127478967 24 + TSS region transcription start site region 69226
Tssr69227 7 127478983 to 127478999 16 + TSS region transcription start site region 69227
Tssr69228 7 127479014 to 127479036 22 + TSS region transcription start site region 69228
Tssr69229 7 127479048 to 127479091 43 + TSS region transcription start site region 69229
Tssr69230 7 127479094 to 127479110 16 + TSS region transcription start site region 69230
Tssr69231 7 127479191 to 127479272 81 + TSS region transcription start site region 69231
Fbrs 7 127479199 to 127491711 12512 + protein coding gene fibrosin
Tssr69232 7 127479852 to 127479865 13 + TSS region transcription start site region 69232
Tssr69233 7 127480068 to 127480081 13 + TSS region transcription start site region 69233
Tssr69234 7 127480616 to 127480626 10 + TSS region transcription start site region 69234
Tssr69235 7 127481337 to 127481358 21 + TSS region transcription start site region 69235
Tssr69236 7 127483017 to 127483107 90 + TSS region transcription start site region 69236
Tssr69237 7 127483108 to 127483138 30 + TSS region transcription start site region 69237
Tssr69238 7 127485109 to 127485161 52 + TSS region transcription start site region 69238
Mir7060 7 127489251 to 127489387 136 + miRNA gene microRNA 7060
Tssr69239 7 127490059 to 127490072 13 + TSS region transcription start site region 69239
Tssr69240 7 127490293 to 127490310 17 + TSS region transcription start site region 69240
Tssr69241 7 127490344 to 127490358 14 + TSS region transcription start site region 69241
Tssr69242 7 127490418 to 127490428 10 + TSS region transcription start site region 69242
Gm47278 7 127490842 to 127490932 90 + miRNA gene predicted gene, 47278
1700008J07Rik 7 127510438 to 127512869 2431 - antisense lncRNA gene RIKEN cDNA 1700008J07 gene
Cpgi19752 7 127511609 to 127513045 1436 CpG island CpG island 19752
Tssr69243 7 127511976 to 127512075 99 + TSS region transcription start site region 69243
Srcap 7 127511983 to 127561219 49236 + protein coding gene Snf2-related CREBBP activator protein
Tssr69244 7 127512081 to 127512090 9 + TSS region transcription start site region 69244
Tssr69245 7 127512091 to 127512102 11 + TSS region transcription start site region 69245
Tssr75006 7 127512231 to 127512242 11 - TSS region transcription start site region 75006
Tssr75007 7 127512308 to 127512326 18 - TSS region transcription start site region 75007
Tssr75008 7 127512333 to 127512387 54 - TSS region transcription start site region 75008
Tssr69246 7 127512403 to 127512496 93 + TSS region transcription start site region 69246
Tssr75009 7 127512406 to 127512417 11 - TSS region transcription start site region 75009
Tssr75010 7 127512836 to 127512869 33 - TSS region transcription start site region 75010
Gm42715 7 127519584 to 127567054 47470 + protein coding gene predicted gene 42715
Tssr69247 7 127519652 to 127519670 18 + TSS region transcription start site region 69247
Tssr69248 7 127520085 to 127520090 5 + TSS region transcription start site region 69248
Tssr69249 7 127525134 to 127525138 4 + TSS region transcription start site region 69249
Snora30 7 127527897 to 127528003 106 + snoRNA gene small nucleolar RNA, H/ACA box 30
Tssr69250 7 127530217 to 127530237 20 + TSS region transcription start site region 69250
Tssr69251 7 127541303 to 127541325 22 + TSS region transcription start site region 69251
Tssr69252 7 127543195 to 127543225 30 + TSS region transcription start site region 69252
Gm28198 7 127559142 to 127573116 13974 - antisense lncRNA gene predicted gene 28198
Tmem265 7 127561223 to 127565271 4048 + protein coding gene transmembrane protein 265
Tssr69253 7 127561730 to 127561742 12 + TSS region transcription start site region 69253
Tssr2407 7 127561751 to 127561764 13 + TSS region transcription start site region 2407
Tssr69254 7 127565477 to 127565480 3 + TSS region transcription start site region 69254
Cpgi19753 7 127573096 to 127573279 183 CpG island CpG island 19753
Phkg2 7 127573345 to 127583307 9962 + protein coding gene phosphorylase kinase, gamma 2 (testis)
Tssr69255 7 127573345 to 127573368 23 + TSS region transcription start site region 69255
Tssr69256 7 127573376 to 127573437 61 + TSS region transcription start site region 69256
Tssr69257 7 127573546 to 127573611 65 + TSS region transcription start site region 69257
Cpgi19754 7 127573621 to 127573782 161 CpG island CpG island 19754
Tssr69258 7 127573636 to 127573660 24 + TSS region transcription start site region 69258
Tssr69259 7 127573678 to 127573683 5 + TSS region transcription start site region 69259
Tssr69260 7 127573720 to 127573737 17 + TSS region transcription start site region 69260
Tssr69261 7 127573864 to 127573873 9 + TSS region transcription start site region 69261
Gm46028 7 127576018 to 127579244 3226 - lncRNA gene predicted gene, 46028
Ccdc189 7 127582383 to 127588595 6212 - protein coding gene coiled-coil domain containing 189
Tssr75011 7 127585171 to 127585208 37 - TSS region transcription start site region 75011
Tssr69262 7 127585313 to 127585326 13 + TSS region transcription start site region 69262
Cpgi19755 7 127587883 to 127589266 1383 CpG island CpG island 19755
Tssr75012 7 127588119 to 127588142 23 - TSS region transcription start site region 75012
Tssr75013 7 127588145 to 127588190 45 - TSS region transcription start site region 75013
Tssr75014 7 127588194 to 127588218 24 - TSS region transcription start site region 75014
Tssr75015 7 127588237 to 127588250 13 - TSS region transcription start site region 75015
Tssr75016 7 127588265 to 127588278 13 - TSS region transcription start site region 75016
Rnf40 7 127588698 to 127603605 14907 + protein coding gene ring finger protein 40
Tssr69263 7 127588714 to 127588725 11 + TSS region transcription start site region 69263
Tssr69264 7 127588739 to 127588791 52 + TSS region transcription start site region 69264
Gm44759 7 127590416 to 127595900 5484 - antisense lncRNA gene predicted gene 44759