Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:127299652-127739670

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183 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itgal 7 127296260 to 127335138 38878 + protein coding gene integrin alpha L
Tssr69198 7 127325220 to 127325243 23 + TSS region transcription start site region 69198
Tssr69199 7 127326311 to 127326345 34 + TSS region transcription start site region 69199
Tssr69200 7 127332354 to 127332362 8 + TSS region transcription start site region 69200
Tssr69201 7 127333570 to 127333581 11 + TSS region transcription start site region 69201
Tssr69202 7 127333602 to 127333625 23 + TSS region transcription start site region 69202
Tssr69203 7 127333650 to 127333667 17 + TSS region transcription start site region 69203
Tssr69204 7 127333781 to 127333835 54 + TSS region transcription start site region 69204
Tssr69205 7 127334713 to 127334748 35 + TSS region transcription start site region 69205
Tssr74988 7 127335121 to 127335139 18 - TSS region transcription start site region 74988
Zfp768 7 127342795 to 127345314 2519 - protein coding gene zinc finger protein 768
Cpgi19738 7 127343303 to 127343964 661 CpG island CpG island 19738
Tssr69206 7 127344397 to 127344430 33 + TSS region transcription start site region 69206
Cpgi19739 7 127344927 to 127346393 1466 CpG island CpG island 19739
Tssr74989 7 127345343 to 127345400 57 - TSS region transcription start site region 74989
Tssr74990 7 127345405 to 127345416 11 - TSS region transcription start site region 74990
Tssr74991 7 127345582 to 127345609 27 - TSS region transcription start site region 74991
Cpgi19740 7 127361444 to 127361700 256 CpG island CpG island 19740
Cpgi19741 7 127363594 to 127364029 435 CpG island CpG island 19741
Zfp747 7 127372537 to 127376050 3513 - protein coding gene zinc finger protein 747
Cpgi19742 7 127375628 to 127376099 471 CpG island CpG island 19742
Tssr74992 7 127375959 to 127375988 29 - TSS region transcription start site region 74992
Tssr74993 7 127375997 to 127376020 23 - TSS region transcription start site region 74993
Tssr74994 7 127376028 to 127376055 27 - TSS region transcription start site region 74994
9130019O22Rik 7 127382260 to 127387166 4906 - protein coding gene RIKEN cDNA 9130019O22 gene
Cpgi19743 7 127386668 to 127387030 362 CpG island CpG island 19743
Tssr74995 7 127387132 to 127387151 19 - TSS region transcription start site region 74995
Tssr74996 7 127387159 to 127387184 25 - TSS region transcription start site region 74996
E430018J23Rik 7 127390830 to 127393662 2832 - protein coding gene RIKEN cDNA E430018J23 gene
Cpgi19744 7 127391687 to 127392086 399 CpG island CpG island 19744
Cpgi19745 7 127393078 to 127393555 477 CpG island CpG island 19745
Tssr74997 7 127393604 to 127393663 59 - TSS region transcription start site region 74997
Smt3h2-ps2 7 127397978 to 127398265 287 + pseudogene SMT3 suppressor of mif two 3 homolog 2, pseudogene 2 (S. cerevisiae)
Zfp764 7 127403668 to 127406822 3154 - protein coding gene zinc finger protein 764
Cpgi19746 7 127406270 to 127406852 582 CpG island CpG island 19746
Tssr74998 7 127406775 to 127406799 24 - TSS region transcription start site region 74998
Tssr74999 7 127406807 to 127406831 24 - TSS region transcription start site region 74999
Gm33080 7 127410820 to 127410991 171 - pseudogene predicted gene, 33080
Zfp688 7 127418967 to 127422068 3101 - protein coding gene zinc finger protein 688
Cpgi19747 7 127421620 to 127422361 741 CpG island CpG island 19747
Tssr75000 7 127421787 to 127421797 10 - TSS region transcription start site region 75000
Tssr75001 7 127422002 to 127422059 57 - TSS region transcription start site region 75001
Gm45184 7 127434422 to 127439392 4970 + lincRNA gene predicted gene 45184
Zfp689 7 127442136 to 127449158 7022 - protein coding gene zinc finger protein 689
Cpgi19748 7 127444109 to 127444876 767 CpG island CpG island 19748
Cpgi19749 7 127448531 to 127449301 770 CpG island CpG island 19749
Tssr75002 7 127448613 to 127448660 47 - TSS region transcription start site region 75002
Tssr69207 7 127448626 to 127448644 18 + TSS region transcription start site region 69207
B130055M24Rik 7 127448636 to 127460360 11724 + lncRNA gene RIKEN cDNA B130055M24 gene
Tssr69208 7 127448656 to 127448707 51 + TSS region transcription start site region 69208
Tssr75003 7 127449060 to 127449077 17 - TSS region transcription start site region 75003
Tssr75004 7 127449109 to 127449166 57 - TSS region transcription start site region 75004
Gm45110 7 127455469 to 127456870 1401 + unclassified gene predicted gene 45110
Prr14 7 127465025 to 127476767 11742 + protein coding gene proline rich 14
Tssr69209 7 127470354 to 127470370 16 + TSS region transcription start site region 69209
Tssr75005 7 127470862 to 127470899 37 - TSS region transcription start site region 75005
Tssr69210 7 127470991 to 127471006 15 + TSS region transcription start site region 69210
Tssr69211 7 127471009 to 127471036 27 + TSS region transcription start site region 69211
Tssr69212 7 127471043 to 127471054 11 + TSS region transcription start site region 69212
Tssr69213 7 127471088 to 127471098 10 + TSS region transcription start site region 69213
Tssr69214 7 127471355 to 127471368 13 + TSS region transcription start site region 69214
Tssr69215 7 127471459 to 127471483 24 + TSS region transcription start site region 69215
Tssr69216 7 127471484 to 127471551 67 + TSS region transcription start site region 69216
Cpgi19750 7 127471554 to 127472221 667 CpG island CpG island 19750
Tssr69217 7 127471599 to 127471628 29 + TSS region transcription start site region 69217
Tssr69218 7 127471709 to 127471724 15 + TSS region transcription start site region 69218
Tssr69219 7 127475115 to 127475128 13 + TSS region transcription start site region 69219
Tssr69220 7 127475201 to 127475217 16 + TSS region transcription start site region 69220
Cpgi19751 7 127477567 to 127479941 2374 CpG island CpG island 19751
Tssr2406 7 127478158 to 127478195 37 + TSS region transcription start site region 2406
Tssr69221 7 127478207 to 127478256 49 + TSS region transcription start site region 69221
Tssr69222 7 127478494 to 127478549 55 + TSS region transcription start site region 69222
Tssr69223 7 127478553 to 127478563 10 + TSS region transcription start site region 69223
Tssr69224 7 127478796 to 127478839 43 + TSS region transcription start site region 69224
Tssr69225 7 127478843 to 127478874 31 + TSS region transcription start site region 69225
Tssr69226 7 127478943 to 127478967 24 + TSS region transcription start site region 69226
Tssr69227 7 127478983 to 127478999 16 + TSS region transcription start site region 69227
Tssr69228 7 127479014 to 127479036 22 + TSS region transcription start site region 69228
Tssr69229 7 127479048 to 127479091 43 + TSS region transcription start site region 69229
Tssr69230 7 127479094 to 127479110 16 + TSS region transcription start site region 69230
Tssr69231 7 127479191 to 127479272 81 + TSS region transcription start site region 69231
Fbrs 7 127479199 to 127491711 12512 + protein coding gene fibrosin
Tssr69232 7 127479852 to 127479865 13 + TSS region transcription start site region 69232
Tssr69233 7 127480068 to 127480081 13 + TSS region transcription start site region 69233
Tssr69234 7 127480616 to 127480626 10 + TSS region transcription start site region 69234
Tssr69235 7 127481337 to 127481358 21 + TSS region transcription start site region 69235
Tssr69236 7 127483017 to 127483107 90 + TSS region transcription start site region 69236
Tssr69237 7 127483108 to 127483138 30 + TSS region transcription start site region 69237
Tssr69238 7 127485109 to 127485161 52 + TSS region transcription start site region 69238
Mir7060 7 127489251 to 127489387 136 + miRNA gene microRNA 7060
Tssr69239 7 127490059 to 127490072 13 + TSS region transcription start site region 69239
Tssr69240 7 127490293 to 127490310 17 + TSS region transcription start site region 69240
Tssr69241 7 127490344 to 127490358 14 + TSS region transcription start site region 69241
Tssr69242 7 127490418 to 127490428 10 + TSS region transcription start site region 69242
Gm47278 7 127490842 to 127490932 90 + miRNA gene predicted gene, 47278
1700008J07Rik 7 127510438 to 127512869 2431 - antisense lncRNA gene RIKEN cDNA 1700008J07 gene
Cpgi19752 7 127511609 to 127513045 1436 CpG island CpG island 19752
Tssr69243 7 127511976 to 127512075 99 + TSS region transcription start site region 69243
Srcap 7 127511983 to 127561219 49236 + protein coding gene Snf2-related CREBBP activator protein
Tssr69244 7 127512081 to 127512090 9 + TSS region transcription start site region 69244
Tssr69245 7 127512091 to 127512102 11 + TSS region transcription start site region 69245
Tssr75006 7 127512231 to 127512242 11 - TSS region transcription start site region 75006
Tssr75007 7 127512308 to 127512326 18 - TSS region transcription start site region 75007
Tssr75008 7 127512333 to 127512387 54 - TSS region transcription start site region 75008
Tssr69246 7 127512403 to 127512496 93 + TSS region transcription start site region 69246
Tssr75009 7 127512406 to 127512417 11 - TSS region transcription start site region 75009
Tssr75010 7 127512836 to 127512869 33 - TSS region transcription start site region 75010
Gm42715 7 127519584 to 127567054 47470 + protein coding gene predicted gene 42715
Tssr69247 7 127519652 to 127519670 18 + TSS region transcription start site region 69247
Tssr69248 7 127520085 to 127520090 5 + TSS region transcription start site region 69248
Tssr69249 7 127525134 to 127525138 4 + TSS region transcription start site region 69249
Snora30 7 127527897 to 127528003 106 + snoRNA gene small nucleolar RNA, H/ACA box 30
Tssr69250 7 127530217 to 127530237 20 + TSS region transcription start site region 69250
Tssr69251 7 127541303 to 127541325 22 + TSS region transcription start site region 69251
Tssr69252 7 127543195 to 127543225 30 + TSS region transcription start site region 69252
Gm28198 7 127559142 to 127573116 13974 - antisense lncRNA gene predicted gene 28198
Tmem265 7 127561223 to 127565271 4048 + protein coding gene transmembrane protein 265
Tssr69253 7 127561730 to 127561742 12 + TSS region transcription start site region 69253
Tssr2407 7 127561751 to 127561764 13 + TSS region transcription start site region 2407
Tssr69254 7 127565477 to 127565480 3 + TSS region transcription start site region 69254
Cpgi19753 7 127573096 to 127573279 183 CpG island CpG island 19753
Tssr69255 7 127573345 to 127573368 23 + TSS region transcription start site region 69255
Phkg2 7 127573345 to 127583307 9962 + protein coding gene phosphorylase kinase, gamma 2 (testis)
Tssr69256 7 127573376 to 127573437 61 + TSS region transcription start site region 69256
Tssr69257 7 127573546 to 127573611 65 + TSS region transcription start site region 69257
Cpgi19754 7 127573621 to 127573782 161 CpG island CpG island 19754
Tssr69258 7 127573636 to 127573660 24 + TSS region transcription start site region 69258
Tssr69259 7 127573678 to 127573683 5 + TSS region transcription start site region 69259
Tssr69260 7 127573720 to 127573737 17 + TSS region transcription start site region 69260
Tssr69261 7 127573864 to 127573873 9 + TSS region transcription start site region 69261
Gm46028 7 127576018 to 127579244 3226 - lncRNA gene predicted gene, 46028
Ccdc189 7 127582383 to 127588595 6212 - protein coding gene coiled-coil domain containing 189
Tssr75011 7 127585171 to 127585208 37 - TSS region transcription start site region 75011
Tssr69262 7 127585313 to 127585326 13 + TSS region transcription start site region 69262
Cpgi19755 7 127587883 to 127589266 1383 CpG island CpG island 19755
Tssr75012 7 127588119 to 127588142 23 - TSS region transcription start site region 75012
Tssr75013 7 127588145 to 127588190 45 - TSS region transcription start site region 75013
Tssr75014 7 127588194 to 127588218 24 - TSS region transcription start site region 75014
Tssr75015 7 127588237 to 127588250 13 - TSS region transcription start site region 75015
Tssr75016 7 127588265 to 127588278 13 - TSS region transcription start site region 75016
Rnf40 7 127588698 to 127603605 14907 + protein coding gene ring finger protein 40
Tssr69263 7 127588714 to 127588725 11 + TSS region transcription start site region 69263
Tssr69264 7 127588739 to 127588791 52 + TSS region transcription start site region 69264
Gm44759 7 127590416 to 127595900 5484 - antisense lncRNA gene predicted gene 44759
Tssr69265 7 127598665 to 127598668 3 + TSS region transcription start site region 69265
Tssr69266 7 127603190 to 127603209 19 + TSS region transcription start site region 69266
1700120K04Rik 7 127603903 to 127604445 542 - antisense lncRNA gene RIKEN cDNA 1700120K04 gene
Tssr75017 7 127604416 to 127604450 34 - TSS region transcription start site region 75017
Tssr75018 7 127604454 to 127604465 11 - TSS region transcription start site region 75018
Zfp629 7 127607031 to 127615785 8754 - protein coding gene zinc finger protein 629
Cpgi19756 7 127611042 to 127612180 1138 CpG island CpG island 19756
Cpgi19757 7 127614211 to 127615688 1477 CpG island CpG island 19757
Tssr75019 7 127615208 to 127615219 11 - TSS region transcription start site region 75019
Tssr75020 7 127615226 to 127615269 43 - TSS region transcription start site region 75020
Cpgi19758 7 127636960 to 127637306 346 CpG island CpG island 19758
Gm39089 7 127647905 to 127651409 3504 - lncRNA gene predicted gene, 39089
Tssr75021 7 127649345 to 127649355 10 - TSS region transcription start site region 75021
Tssr75022 7 127649370 to 127649371 1 - TSS region transcription start site region 75022
Tssr69267 7 127652125 to 127652130 5 + TSS region transcription start site region 69267
Cpgi19759 7 127652159 to 127652430 271 CpG island CpG island 19759
Gm44760 7 127657062 to 127658234 1172 - unclassified gene predicted gene 44760
Bcl7c 7 127661456 to 127708933 47477 - protein coding gene B cell CLL/lymphoma 7C
Tssr75023 7 127686826 to 127686840 14 - TSS region transcription start site region 75023
Tssr69268 7 127691658 to 127691668 10 + TSS region transcription start site region 69268
Tssr69269 7 127691924 to 127691984 60 + TSS region transcription start site region 69269
Gm39090 7 127691935 to 127700793 8858 + lincRNA gene predicted gene, 39090
Cpgi19760 7 127707903 to 127709217 1314 CpG island CpG island 19760
Tssr75024 7 127708050 to 127708084 34 - TSS region transcription start site region 75024
Tssr75025 7 127708098 to 127708118 20 - TSS region transcription start site region 75025
Mir762 7 127708487 to 127708562 75 + miRNA gene microRNA 762
Tssr75026 7 127708585 to 127708602 17 - TSS region transcription start site region 75026
Tssr75027 7 127708620 to 127708665 45 - TSS region transcription start site region 75027
Tssr75028 7 127708680 to 127708706 26 - TSS region transcription start site region 75028
Tssr75029 7 127708738 to 127708791 53 - TSS region transcription start site region 75029
Tssr75030 7 127708849 to 127708877 28 - TSS region transcription start site region 75030
Tssr75031 7 127708886 to 127708918 32 - TSS region transcription start site region 75031
Tssr69270 7 127712709 to 127712745 36 + TSS region transcription start site region 69270
Ctf1 7 127712736 to 127718192 5456 + protein coding gene cardiotrophin 1
Cpgi19761 7 127713063 to 127713272 209 CpG island CpG island 19761
Cpgi19762 7 127716916 to 127717594 678 CpG island CpG island 19762
Ctf2 7 127718960 to 127725616 6656 - protein coding gene cardiotrophin 2
D7Ertd481e 7 127724318 to 127724527 209 DNA segment DNA segment, Chr 7, ERATO Doi 481, expressed
Tssr2408 7 127730912 to 127730914 2 + TSS region transcription start site region 2408