Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:127134008-127414036

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142 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dp(7Slx1b-Sept1)5Aam 7 126689468 to 127232987 543519 chromosomal duplication duplication, Chr 7, Alea A Mills 5
Del(7Slx1b-Sept1)4Aam 7 126689468 to 127232987 543519 chromosomal deletion deletion, Chr 7, Alea A Mills 4
Spn 7 127132232 to 127137823 5591 - protein coding gene sialophorin
Tssr74945 7 127137356 to 127137401 45 - TSS region transcription start site region 74945
Tssr74946 7 127137807 to 127137827 20 - TSS region transcription start site region 74946
Tssr74947 7 127144335 to 127144351 16 - TSS region transcription start site region 74947
Tssr74948 7 127144529 to 127144538 9 - TSS region transcription start site region 74948
Tssr74949 7 127144551 to 127144565 14 - TSS region transcription start site region 74949
Tssr74950 7 127144584 to 127144591 7 - TSS region transcription start site region 74950
Tssr74951 7 127144603 to 127144632 29 - TSS region transcription start site region 74951
Gm18561 7 127155069 to 127156006 937 + pseudogene predicted gene, 18561
Tssr74952 7 127162610 to 127162646 36 - TSS region transcription start site region 74952
Gm44940 7 127171959 to 127173205 1246 - unclassified gene predicted gene 44940
Gm25735 7 127191027 to 127191241 214 + unclassified non-coding RNA gene predicted gene, 25735
Cd2bp2 7 127191660 to 127196050 4390 - protein coding gene CD2 cytoplasmic tail binding protein 2
Cpgi19729 7 127195511 to 127196448 937 CpG island CpG island 19729
Tssr74953 7 127195868 to 127195880 12 - TSS region transcription start site region 74953
Tssr74954 7 127195925 to 127196006 81 - TSS region transcription start site region 74954
Tssr74955 7 127196049 to 127196058 9 - TSS region transcription start site region 74955
Tssr69166 7 127196183 to 127196196 13 + TSS region transcription start site region 69166
Tbc1d10b 7 127197459 to 127208468 11009 - protein coding gene TBC1 domain family, member 10b
Cpgi19730 7 127207472 to 127208994 1522 CpG island CpG island 19730
Tssr74956 7 127208423 to 127208504 81 - TSS region transcription start site region 74956
Tssr74957 7 127208572 to 127208643 71 - TSS region transcription start site region 74957
Tssr69167 7 127208844 to 127208887 43 + TSS region transcription start site region 69167
Mylpf 7 127208890 to 127214298 5408 + protein coding gene myosin light chain, phosphorylatable, fast skeletal muscle
Tssr69168 7 127209274 to 127209292 18 + TSS region transcription start site region 69168
Tssr74958 7 127210326 to 127210329 3 - TSS region transcription start site region 74958
Tssr69169 7 127211697 to 127211711 14 + TSS region transcription start site region 69169
Tssr69170 7 127212613 to 127212630 17 + TSS region transcription start site region 69170
Tssr69171 7 127212632 to 127212637 5 + TSS region transcription start site region 69171
Tssr69172 7 127212659 to 127212672 13 + TSS region transcription start site region 69172
Tssr69173 7 127212852 to 127212863 11 + TSS region transcription start site region 69173
Tssr69174 7 127213091 to 127213129 38 + TSS region transcription start site region 69174
Tssr69175 7 127213131 to 127213148 17 + TSS region transcription start site region 69175
Tssr69176 7 127213156 to 127213189 33 + TSS region transcription start site region 69176
Tssr69177 7 127213192 to 127213203 11 + TSS region transcription start site region 69177
Tssr74959 7 127213466 to 127213478 12 - TSS region transcription start site region 74959
Tssr74960 7 127214187 to 127214217 30 - TSS region transcription start site region 74960
Tssr69178 7 127214206 to 127214244 38 + TSS region transcription start site region 69178
Tssr69179 7 127214250 to 127214261 11 + TSS region transcription start site region 69179
Sept1 7 127214442 to 127232987 18545 - protein coding gene septin 1
Tssr69180 7 127214532 to 127214567 35 + TSS region transcription start site region 69180
Cpgi19731 7 127214596 to 127214907 311 CpG island CpG island 19731
Tssr74961 7 127214746 to 127214763 17 - TSS region transcription start site region 74961
Tssr74962 7 127215014 to 127215033 19 - TSS region transcription start site region 74962
Tssr74963 7 127215043 to 127215070 27 - TSS region transcription start site region 74963
Tssr74964 7 127215085 to 127215103 18 - TSS region transcription start site region 74964
Cpgi19732 7 127215211 to 127215484 273 CpG island CpG island 19732
Tssr74965 7 127215329 to 127215349 20 - TSS region transcription start site region 74965
Tssr74966 7 127215379 to 127215443 64 - TSS region transcription start site region 74966
Tssr74967 7 127215683 to 127215695 12 - TSS region transcription start site region 74967
Tssr74968 7 127218009 to 127218022 13 - TSS region transcription start site region 74968
Tssr74969 7 127218371 to 127218380 9 - TSS region transcription start site region 74969
Tssr74970 7 127218398 to 127218465 67 - TSS region transcription start site region 74970
Tssr74971 7 127218467 to 127218478 11 - TSS region transcription start site region 74971
Tssr2404 7 127218512 to 127218533 21 + TSS region transcription start site region 2404
Tssr74972 7 127218731 to 127218736 5 - TSS region transcription start site region 74972
Tssr74973 7 127218837 to 127218856 19 - TSS region transcription start site region 74973
Tssr69181 7 127223793 to 127223808 15 + TSS region transcription start site region 69181
Gm4532 7 127232418 to 127233130 712 - lncRNA gene predicted gene 4532
Tssr74974 7 127232631 to 127232654 23 - TSS region transcription start site region 74974
Cpgi19733 7 127232735 to 127233713 978 CpG island CpG island 19733
Tssr74975 7 127232748 to 127232752 4 - TSS region transcription start site region 74975
Tssr69182 7 127232884 to 127232904 20 + TSS region transcription start site region 69182
Tssr74976 7 127232890 to 127232968 78 - TSS region transcription start site region 74976
Tssr69183 7 127233044 to 127233073 29 + TSS region transcription start site region 69183
Tssr74977 7 127233124 to 127233235 111 - TSS region transcription start site region 74977
Tssr69184 7 127233227 to 127233317 90 + TSS region transcription start site region 69184
Zfp553 7 127233255 to 127238042 4787 + protein coding gene zinc finger protein 553
Cpgi19734 7 127243988 to 127245162 1174 CpG island CpG island 19734
Zfp771 7 127244480 to 127254807 10327 + protein coding gene zinc finger protein 771
Tssr69185 7 127244511 to 127244578 67 + TSS region transcription start site region 69185
Cpgi19735 7 127253466 to 127254998 1532 CpG island CpG island 19735
Dctpp1 7 127256959 to 127260667 3708 - protein coding gene dCTP pyrophosphatase 1
Cpgi19736 7 127260400 to 127260939 539 CpG island CpG island 19736
Tssr74978 7 127260606 to 127260609 3 - TSS region transcription start site region 74978
Tssr74979 7 127260620 to 127260676 56 - TSS region transcription start site region 74979
Tssr74980 7 127260677 to 127260706 29 - TSS region transcription start site region 74980
Sephs2 7 127271879 to 127274055 2176 - protein coding gene selenophosphate synthetase 2
Tssr74981 7 127272483 to 127272489 6 - TSS region transcription start site region 74981
Tssr74982 7 127273130 to 127273160 30 - TSS region transcription start site region 74982
Cpgi19737 7 127273181 to 127274389 1208 CpG island CpG island 19737
Gm44729 7 127273264 to 127275315 2051 + unclassified gene predicted gene 44729
Tssr74983 7 127273512 to 127273525 13 - TSS region transcription start site region 74983
Tssr2405 7 127273991 to 127274000 9 - TSS region transcription start site region 2405
Tssr74984 7 127274008 to 127274036 28 - TSS region transcription start site region 74984
Tssr74985 7 127274047 to 127274066 19 - TSS region transcription start site region 74985
Tssr74986 7 127274081 to 127274089 8 - TSS region transcription start site region 74986
Tssr69186 7 127278561 to 127278575 14 + TSS region transcription start site region 69186
Gm17511 7 127286044 to 127286385 341 - pseudogene predicted gene, 17511
Tssr74987 7 127286496 to 127286497 1 - TSS region transcription start site region 74987
Gm31897 7 127287729 to 127290619 2890 + lincRNA gene predicted gene, 31897
Tssr69187 7 127288201 to 127288225 24 + TSS region transcription start site region 69187
Tssr69188 7 127296229 to 127296232 3 + TSS region transcription start site region 69188
Tssr69189 7 127296236 to 127296247 11 + TSS region transcription start site region 69189
Tssr69190 7 127296251 to 127296275 24 + TSS region transcription start site region 69190
Itgal 7 127296260 to 127335138 38878 + protein coding gene integrin alpha L
Tssr69191 7 127296291 to 127296320 29 + TSS region transcription start site region 69191
Tssr69192 7 127296338 to 127296352 14 + TSS region transcription start site region 69192
Tssr69193 7 127296369 to 127296389 20 + TSS region transcription start site region 69193
Tssr69194 7 127297328 to 127297377 49 + TSS region transcription start site region 69194
Tssr69195 7 127297387 to 127297399 12 + TSS region transcription start site region 69195
Tssr69196 7 127297414 to 127297434 20 + TSS region transcription start site region 69196
Tssr69197 7 127297608 to 127297619 11 + TSS region transcription start site region 69197
Tssr69198 7 127325220 to 127325243 23 + TSS region transcription start site region 69198
Tssr69199 7 127326311 to 127326345 34 + TSS region transcription start site region 69199
Tssr69200 7 127332354 to 127332362 8 + TSS region transcription start site region 69200
Tssr69201 7 127333570 to 127333581 11 + TSS region transcription start site region 69201
Tssr69202 7 127333602 to 127333625 23 + TSS region transcription start site region 69202
Tssr69203 7 127333650 to 127333667 17 + TSS region transcription start site region 69203
Tssr69204 7 127333781 to 127333835 54 + TSS region transcription start site region 69204
Tssr69205 7 127334713 to 127334748 35 + TSS region transcription start site region 69205
Tssr74988 7 127335121 to 127335139 18 - TSS region transcription start site region 74988
Zfp768 7 127342795 to 127345314 2519 - protein coding gene zinc finger protein 768
Cpgi19738 7 127343303 to 127343964 661 CpG island CpG island 19738
Tssr69206 7 127344397 to 127344430 33 + TSS region transcription start site region 69206
Cpgi19739 7 127344927 to 127346393 1466 CpG island CpG island 19739
Tssr74989 7 127345343 to 127345400 57 - TSS region transcription start site region 74989
Tssr74990 7 127345405 to 127345416 11 - TSS region transcription start site region 74990
Tssr74991 7 127345582 to 127345609 27 - TSS region transcription start site region 74991
Cpgi19740 7 127361444 to 127361700 256 CpG island CpG island 19740
Cpgi19741 7 127363594 to 127364029 435 CpG island CpG island 19741
Zfp747 7 127372537 to 127376050 3513 - protein coding gene zinc finger protein 747
Cpgi19742 7 127375628 to 127376099 471 CpG island CpG island 19742
Tssr74992 7 127375959 to 127375988 29 - TSS region transcription start site region 74992
Tssr74993 7 127375997 to 127376020 23 - TSS region transcription start site region 74993
Tssr74994 7 127376028 to 127376055 27 - TSS region transcription start site region 74994
9130019O22Rik 7 127382260 to 127387166 4906 - protein coding gene RIKEN cDNA 9130019O22 gene
Cpgi19743 7 127386668 to 127387030 362 CpG island CpG island 19743
Tssr74995 7 127387132 to 127387151 19 - TSS region transcription start site region 74995
Tssr74996 7 127387159 to 127387184 25 - TSS region transcription start site region 74996
E430018J23Rik 7 127390830 to 127393662 2832 - protein coding gene RIKEN cDNA E430018J23 gene
Cpgi19744 7 127391687 to 127392086 399 CpG island CpG island 19744
Cpgi19745 7 127393078 to 127393555 477 CpG island CpG island 19745
Tssr74997 7 127393604 to 127393663 59 - TSS region transcription start site region 74997
Smt3h2-ps2 7 127397978 to 127398265 287 + pseudogene SMT3 suppressor of mif two 3 homolog 2, pseudogene 2 (S. cerevisiae)
Zfp764 7 127403668 to 127406822 3154 - protein coding gene zinc finger protein 764
Cpgi19746 7 127406270 to 127406852 582 CpG island CpG island 19746
Tssr74998 7 127406775 to 127406799 24 - TSS region transcription start site region 74998
Tssr74999 7 127406807 to 127406831 24 - TSS region transcription start site region 74999
Gm33080 7 127410820 to 127410991 171 - pseudogene predicted gene, 33080