Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 7:127032232-127237823

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115 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(7Slx1b-Sept1)4Aam 7 126689468 to 127232987 543519 chromosomal deletion deletion, Chr 7, Alea A Mills 4
Dp(7Slx1b-Sept1)5Aam 7 126689468 to 127232987 543519 chromosomal duplication duplication, Chr 7, Alea A Mills 5
Kif22 7 127027729 to 127042467 14738 - protein coding gene kinesin family member 22
Gm31749 7 127031468 to 127035291 3823 + lncRNA gene predicted gene, 31749
D7Ertd807e 7 127038632 to 127038831 199 DNA segment DNA segment, Chr 7, ERATO Doi 807, expressed
Cpgi19728 7 127041865 to 127042597 732 CpG island CpG island 19728
Tssr74929 7 127042382 to 127042389 7 - TSS region transcription start site region 74929
Tssr74930 7 127042393 to 127042414 21 - TSS region transcription start site region 74930
Tssr74931 7 127042421 to 127042444 23 - TSS region transcription start site region 74931
Gm25333 7 127046112 to 127046357 245 + unclassified non-coding RNA gene predicted gene, 25333
Tssr69156 7 127046906 to 127046911 5 + TSS region transcription start site region 69156
Gm44343 7 127047163 to 127047252 89 - miRNA gene predicted gene, 44343
Zg16 7 127050156 to 127052675 2519 - protein coding gene zymogen granule protein 16
Tssr74932 7 127050256 to 127050266 10 - TSS region transcription start site region 74932
Tssr2402 7 127050262 to 127050275 13 + TSS region transcription start site region 2402
Tssr74933 7 127050322 to 127050340 18 - TSS region transcription start site region 74933
Tssr69157 7 127050519 to 127050531 12 + TSS region transcription start site region 69157
Tssr74934 7 127050526 to 127050539 13 - TSS region transcription start site region 74934
Tssr74935 7 127051665 to 127051686 21 - TSS region transcription start site region 74935
Tssr74936 7 127051688 to 127051716 28 - TSS region transcription start site region 74936
Tssr69158 7 127051711 to 127051723 12 + TSS region transcription start site region 69158
Tssr74937 7 127051948 to 127051987 39 - TSS region transcription start site region 74937
Tssr74938 7 127052649 to 127052663 14 - TSS region transcription start site region 74938
Tssr2403 7 127052680 to 127052694 14 - TSS region transcription start site region 2403
Gm44939 7 127068456 to 127071039 2583 + lncRNA gene predicted gene 44939
Gm51457 7 127076994 to 127078944 1950 + lncRNA gene predicted gene, 51457
Gm22747 7 127079481 to 127079587 106 + snRNA gene predicted gene, 22747
Tssr69159 7 127083819 to 127083846 27 + TSS region transcription start site region 69159
D7Csu5 7 127085571 to 127085868 297 DNA segment DNA segment, Chr 7, Central Connecticut State University 5
Tssr69160 7 127090757 to 127090782 25 + TSS region transcription start site region 69160
Tssr74939 7 127091154 to 127091161 7 - TSS region transcription start site region 74939
Tssr74940 7 127091175 to 127091201 26 - TSS region transcription start site region 74940
Tssr69161 7 127091339 to 127091348 9 + TSS region transcription start site region 69161
AI467606 7 127091359 to 127093986 2627 + protein coding gene expressed sequence AI467606
Tssr69162 7 127091367 to 127091423 56 + TSS region transcription start site region 69162
Tssr69163 7 127091426 to 127091450 24 + TSS region transcription start site region 69163
Tssr69164 7 127091458 to 127091467 9 + TSS region transcription start site region 69164
Tssr69165 7 127092460 to 127092467 7 + TSS region transcription start site region 69165
Ulnl10 7 127100000 to 81200000 -45900000 QTL ulna length 10, 16 week
Tssr74941 7 127100593 to 127100615 22 - TSS region transcription start site region 74941
Qprt 7 127107770 to 127122029 14259 - protein coding gene quinolinate phosphoribosyltransferase
Tssr74942 7 127107784 to 127107789 5 - TSS region transcription start site region 74942
Civq6 7 127108163 to 127108163 0 QTL cerebral infarct volume QTL 6
Civq1 7 127108163 to 127108163 0 QTL cerebral infarct volume QTL 1
Civq5 7 127108163 to 127108163 0 QTL cerebral infarct volume QTL 5
Tssr74943 7 127122007 to 127122027 20 - TSS region transcription start site region 74943
Tssr74944 7 127122028 to 127122056 28 - TSS region transcription start site region 74944
Spn 7 127132232 to 127137823 5591 - protein coding gene sialophorin
Tssr74945 7 127137356 to 127137401 45 - TSS region transcription start site region 74945
Tssr74946 7 127137807 to 127137827 20 - TSS region transcription start site region 74946
Tssr74947 7 127144335 to 127144351 16 - TSS region transcription start site region 74947
Tssr74948 7 127144529 to 127144538 9 - TSS region transcription start site region 74948
Tssr74949 7 127144551 to 127144565 14 - TSS region transcription start site region 74949
Tssr74950 7 127144584 to 127144591 7 - TSS region transcription start site region 74950
Tssr74951 7 127144603 to 127144632 29 - TSS region transcription start site region 74951
Gm18561 7 127155069 to 127156006 937 + pseudogene predicted gene, 18561
Tssr74952 7 127162610 to 127162646 36 - TSS region transcription start site region 74952
Gm44940 7 127171959 to 127173205 1246 - unclassified gene predicted gene 44940
Gm25735 7 127191027 to 127191241 214 + unclassified non-coding RNA gene predicted gene, 25735
Cd2bp2 7 127191660 to 127196050 4390 - protein coding gene CD2 cytoplasmic tail binding protein 2
Cpgi19729 7 127195511 to 127196448 937 CpG island CpG island 19729
Tssr74953 7 127195868 to 127195880 12 - TSS region transcription start site region 74953
Tssr74954 7 127195925 to 127196006 81 - TSS region transcription start site region 74954
Tssr74955 7 127196049 to 127196058 9 - TSS region transcription start site region 74955
Tssr69166 7 127196183 to 127196196 13 + TSS region transcription start site region 69166
Tbc1d10b 7 127197459 to 127208468 11009 - protein coding gene TBC1 domain family, member 10b
Cpgi19730 7 127207472 to 127208994 1522 CpG island CpG island 19730
Tssr74956 7 127208423 to 127208504 81 - TSS region transcription start site region 74956
Tssr74957 7 127208572 to 127208643 71 - TSS region transcription start site region 74957
Tssr69167 7 127208844 to 127208887 43 + TSS region transcription start site region 69167
Mylpf 7 127208890 to 127214298 5408 + protein coding gene myosin light chain, phosphorylatable, fast skeletal muscle
Tssr69168 7 127209274 to 127209292 18 + TSS region transcription start site region 69168
Tssr74958 7 127210326 to 127210329 3 - TSS region transcription start site region 74958
Tssr69169 7 127211697 to 127211711 14 + TSS region transcription start site region 69169
Tssr69170 7 127212613 to 127212630 17 + TSS region transcription start site region 69170
Tssr69171 7 127212632 to 127212637 5 + TSS region transcription start site region 69171
Tssr69172 7 127212659 to 127212672 13 + TSS region transcription start site region 69172
Tssr69173 7 127212852 to 127212863 11 + TSS region transcription start site region 69173
Tssr69174 7 127213091 to 127213129 38 + TSS region transcription start site region 69174
Tssr69175 7 127213131 to 127213148 17 + TSS region transcription start site region 69175
Tssr69176 7 127213156 to 127213189 33 + TSS region transcription start site region 69176
Tssr69177 7 127213192 to 127213203 11 + TSS region transcription start site region 69177
Tssr74959 7 127213466 to 127213478 12 - TSS region transcription start site region 74959
Tssr74960 7 127214187 to 127214217 30 - TSS region transcription start site region 74960
Tssr69178 7 127214206 to 127214244 38 + TSS region transcription start site region 69178
Tssr69179 7 127214250 to 127214261 11 + TSS region transcription start site region 69179
Septin1 7 127214447 to 127233130 18683 - protein coding gene septin 1
Tssr69180 7 127214532 to 127214567 35 + TSS region transcription start site region 69180
Cpgi19731 7 127214596 to 127214907 311 CpG island CpG island 19731
Tssr74961 7 127214746 to 127214763 17 - TSS region transcription start site region 74961
Tssr74962 7 127215014 to 127215033 19 - TSS region transcription start site region 74962
Tssr74963 7 127215043 to 127215070 27 - TSS region transcription start site region 74963
Tssr74964 7 127215085 to 127215103 18 - TSS region transcription start site region 74964
Cpgi19732 7 127215211 to 127215484 273 CpG island CpG island 19732
Tssr74965 7 127215329 to 127215349 20 - TSS region transcription start site region 74965
Tssr74966 7 127215379 to 127215443 64 - TSS region transcription start site region 74966
Tssr74967 7 127215683 to 127215695 12 - TSS region transcription start site region 74967
Tssr74968 7 127218009 to 127218022 13 - TSS region transcription start site region 74968
Tssr74969 7 127218371 to 127218380 9 - TSS region transcription start site region 74969
Tssr74970 7 127218398 to 127218465 67 - TSS region transcription start site region 74970
Tssr74971 7 127218467 to 127218478 11 - TSS region transcription start site region 74971
Tssr2404 7 127218512 to 127218533 21 + TSS region transcription start site region 2404
Tssr74972 7 127218731 to 127218736 5 - TSS region transcription start site region 74972
Tssr74973 7 127218837 to 127218856 19 - TSS region transcription start site region 74973
Tssr69181 7 127223793 to 127223808 15 + TSS region transcription start site region 69181
Gm4532 7 127232418 to 127233130 712 - lncRNA gene predicted gene 4532
Tssr74974 7 127232631 to 127232654 23 - TSS region transcription start site region 74974
Cpgi19733 7 127232735 to 127233713 978 CpG island CpG island 19733
Tssr74975 7 127232748 to 127232752 4 - TSS region transcription start site region 74975
Tssr69182 7 127232884 to 127232904 20 + TSS region transcription start site region 69182
Tssr74976 7 127232890 to 127232968 78 - TSS region transcription start site region 74976
Tssr69183 7 127233044 to 127233073 29 + TSS region transcription start site region 69183
Zfp553 7 127233061 to 127238179 5118 + protein coding gene zinc finger protein 553
Tssr74977 7 127233124 to 127233235 111 - TSS region transcription start site region 74977
Tssr69184 7 127233227 to 127233317 90 + TSS region transcription start site region 69184