Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:126777132-127997151

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722 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dp(7Slx1b-Sept1)5Aam 7 126689468 to 127232987 543519 chromosomal duplication duplication, Chr 7, Alea A Mills 5
Del(7Slx1b-Sept1)4Aam 7 126689468 to 127232987 543519 chromosomal deletion deletion, Chr 7, Alea A Mills 4
Cpgi19710 7 126776637 to 126777353 716 CpG island CpG island 19710
Ypel3 7 126776975 to 126780514 3539 + protein coding gene yippee like 3
Tssr2396 7 126777128 to 126777135 7 + TSS region transcription start site region 2396
Tssr2397 7 126777157 to 126777178 21 + TSS region transcription start site region 2397
Tssr2398 7 126777181 to 126777192 11 + TSS region transcription start site region 2398
Tssr69079 7 126777766 to 126777798 32 + TSS region transcription start site region 69079
Tssr69080 7 126780287 to 126780301 14 + TSS region transcription start site region 69080
Cpgi19711 7 126780645 to 126780887 242 CpG island CpG island 19711
Tbx6 7 126781483 to 126785548 4065 + protein coding gene T-box 6
Ppp4c 7 126785866 to 126792471 6605 - protein coding gene protein phosphatase 4, catalytic subunit
Cpgi19712 7 126791740 to 126792734 994 CpG island CpG island 19712
Tssr74814 7 126792143 to 126792172 29 - TSS region transcription start site region 74814
Tssr74815 7 126792173 to 126792209 36 - TSS region transcription start site region 74815
Tssr74816 7 126792216 to 126792239 23 - TSS region transcription start site region 74816
Tssr74817 7 126792356 to 126792365 9 - TSS region transcription start site region 74817
Tssr74818 7 126792446 to 126792455 9 - TSS region transcription start site region 74818
Tssr74819 7 126792469 to 126792478 9 - TSS region transcription start site region 74819
Tssr74820 7 126792485 to 126792539 54 - TSS region transcription start site region 74820
Aldoa 7 126795234 to 126809510 14276 - protein coding gene aldolase A, fructose-bisphosphate
Tssr69081 7 126795246 to 126795290 44 + TSS region transcription start site region 69081
Tssr74821 7 126795701 to 126795728 27 - TSS region transcription start site region 74821
Tssr74822 7 126796658 to 126796671 13 - TSS region transcription start site region 74822
Tssr74823 7 126797431 to 126797435 4 - TSS region transcription start site region 74823
Tssr69082 7 126797445 to 126797469 24 + TSS region transcription start site region 69082
Tssr74824 7 126797479 to 126797505 26 - TSS region transcription start site region 74824
Tssr69083 7 126797608 to 126797613 5 + TSS region transcription start site region 69083
Tssr69084 7 126797614 to 126797639 25 + TSS region transcription start site region 69084
Tssr74825 7 126797748 to 126797794 46 - TSS region transcription start site region 74825
Tssr74826 7 126797896 to 126797928 32 - TSS region transcription start site region 74826
Tssr74827 7 126798246 to 126798262 16 - TSS region transcription start site region 74827
Tssr74828 7 126798503 to 126798518 15 - TSS region transcription start site region 74828
Cpgi19713 7 126798505 to 126800029 1524 CpG island CpG island 19713
Tssr74829 7 126798592 to 126798607 15 - TSS region transcription start site region 74829
Tssr74830 7 126798786 to 126798804 18 - TSS region transcription start site region 74830
Tssr74831 7 126799134 to 126799155 21 - TSS region transcription start site region 74831
Tssr74832 7 126799163 to 126799191 28 - TSS region transcription start site region 74832
Tssr74833 7 126799550 to 126799588 38 - TSS region transcription start site region 74833
Tssr69085 7 126799571 to 126799600 29 + TSS region transcription start site region 69085
Tssr69086 7 126799607 to 126799627 20 + TSS region transcription start site region 69086
2900046D03Rik 7 126799656 to 126799905 249 unclassified gene RIKEN cDNA 2900046D03 gene
Tssr74834 7 126800037 to 126800054 17 - TSS region transcription start site region 74834
Tssr2399 7 126800149 to 126800165 16 - TSS region transcription start site region 2399
Tssr74835 7 126800328 to 126800337 9 - TSS region transcription start site region 74835
Tssr74836 7 126800354 to 126800430 76 - TSS region transcription start site region 74836
Tssr74837 7 126800525 to 126800530 5 - TSS region transcription start site region 74837
Tssr74838 7 126800606 to 126800655 49 - TSS region transcription start site region 74838
Gm44856 7 126806257 to 126806560 303 + pseudogene predicted gene 44856
Tssr69087 7 126807714 to 126807723 9 + TSS region transcription start site region 69087
Tssr69088 7 126807741 to 126807751 10 + TSS region transcription start site region 69088
Tssr69089 7 126807752 to 126807783 31 + TSS region transcription start site region 69089
Tssr69090 7 126807814 to 126807825 11 + TSS region transcription start site region 69090
Cpgi19714 7 126808900 to 126809492 592 CpG island CpG island 19714
Tssr74839 7 126809134 to 126809231 97 - TSS region transcription start site region 74839
Tssr69091 7 126812667 to 126812686 19 + TSS region transcription start site region 69091
Tssr69092 7 126814000 to 126814015 15 + TSS region transcription start site region 69092
Fam57b 7 126814041 to 126830219 16178 + protein coding gene family with sequence similarity 57, member B
Tssr69093 7 126823181 to 126823214 33 + TSS region transcription start site region 69093
Tssr69094 7 126823287 to 126823323 36 + TSS region transcription start site region 69094
Cpgi19715 7 126823453 to 126823670 217 CpG island CpG island 19715
Tssr69095 7 126823704 to 126823806 102 + TSS region transcription start site region 69095
Tssr69096 7 126823824 to 126823835 11 + TSS region transcription start site region 69096
Tssr69097 7 126823880 to 126823899 19 + TSS region transcription start site region 69097
Tssr69098 7 126824113 to 126824135 22 + TSS region transcription start site region 69098
Cpgi19716 7 126828586 to 126828777 191 CpG island CpG island 19716
Cpgi19717 7 126829184 to 126829500 316 CpG island CpG island 19717
4930451I11Rik 7 126830468 to 126831544 1076 - protein coding gene RIKEN cDNA 4930451I11 gene
Tssr74840 7 126831466 to 126831481 15 - TSS region transcription start site region 74840
Tssr74841 7 126831665 to 126831681 16 - TSS region transcription start site region 74841
D7Sri88 7 126833559 to 126833734 175 DNA segment DNA segment, Chr 7, The Scripps Research Institute 88
Gm44854 7 126837212 to 126846388 9176 + lincRNA gene predicted gene 44854
Cpgi19718 7 126847179 to 126848836 1657 CpG island CpG island 19718
Doc2a 7 126847416 to 126852705 5289 + protein coding gene double C2, alpha
Tssr2400 7 126847707 to 126847759 52 + TSS region transcription start site region 2400
Tssr69099 7 126847908 to 126847919 11 + TSS region transcription start site region 69099
Ino80e 7 126851584 to 126862371 10787 - protein coding gene INO80 complex subunit E
Tssr74842 7 126857315 to 126857343 28 - TSS region transcription start site region 74842
Tssr69100 7 126861192 to 126861208 16 + TSS region transcription start site region 69100
Cpgi19719 7 126861428 to 126862790 1362 CpG island CpG island 19719
Tssr74843 7 126861690 to 126861728 38 - TSS region transcription start site region 74843
Tssr74844 7 126861807 to 126861824 17 - TSS region transcription start site region 74844
Tssr74845 7 126861828 to 126861895 67 - TSS region transcription start site region 74845
Tssr69101 7 126861920 to 126861936 16 + TSS region transcription start site region 69101
Tssr69102 7 126861947 to 126861986 39 + TSS region transcription start site region 69102
Hirip3 7 126861972 to 126865129 3157 + protein coding gene HIRA interacting protein 3
Tssr74846 7 126862350 to 126862393 43 - TSS region transcription start site region 74846
Tssr69103 7 126862431 to 126862447 16 + TSS region transcription start site region 69103
Tssr69104 7 126862572 to 126862586 14 + TSS region transcription start site region 69104
Tssr69105 7 126862587 to 126862611 24 + TSS region transcription start site region 69105
Tssr69106 7 126862630 to 126862684 54 + TSS region transcription start site region 69106
Tssr69107 7 126863332 to 126863355 23 + TSS region transcription start site region 69107
Tssr69108 7 126863424 to 126863444 20 + TSS region transcription start site region 69108
Taok2 7 126865678 to 126884703 19025 - protein coding gene TAO kinase 2
Tssr69109 7 126872359 to 126872361 2 + TSS region transcription start site region 69109
Tssr74847 7 126876060 to 126876076 16 - TSS region transcription start site region 74847
Cpgi19720 7 126883917 to 126885122 1205 CpG island CpG island 19720
Tssr74848 7 126883965 to 126884000 35 - TSS region transcription start site region 74848
Tssr74849 7 126884638 to 126884670 32 - TSS region transcription start site region 74849
Tssr74850 7 126884678 to 126884728 50 - TSS region transcription start site region 74850
Tssr74851 7 126884960 to 126884977 17 - TSS region transcription start site region 74851
Tmem219 7 126886171 to 126922917 36746 - protein coding gene transmembrane protein 219
Gm20650 7 126891622 to 126897236 5614 + unclassified non-coding RNA gene predicted gene 20650
Tssr74852 7 126897233 to 126897244 11 - TSS region transcription start site region 74852
Tssr74853 7 126897341 to 126897354 13 - TSS region transcription start site region 74853
Tssr74854 7 126897362 to 126897415 53 - TSS region transcription start site region 74854
Tssr74855 7 126897472 to 126897483 11 - TSS region transcription start site region 74855
Tssr74856 7 126897513 to 126897525 12 - TSS region transcription start site region 74856
Tssr69110 7 126897580 to 126897599 19 + TSS region transcription start site region 69110
Cpgi19721 7 126897934 to 126898479 545 CpG island CpG island 19721
Tssr74857 7 126898225 to 126898247 22 - TSS region transcription start site region 74857
Tssr74858 7 126898249 to 126898288 39 - TSS region transcription start site region 74858
Gm23445 7 126915720 to 126915826 106 - snRNA gene predicted gene, 23445
Tssr74859 7 126922847 to 126922886 39 - TSS region transcription start site region 74859
Tssr74860 7 126922887 to 126922926 39 - TSS region transcription start site region 74860
Cpgi19722 7 126928546 to 126929496 950 CpG island CpG island 19722
Tssr74861 7 126928782 to 126928814 32 - TSS region transcription start site region 74861
Tssr69111 7 126928844 to 126928899 55 + TSS region transcription start site region 69111
Kctd13 7 126928879 to 126945631 16752 + protein coding gene potassium channel tetramerisation domain containing 13
Tssr69112 7 126928900 to 126928905 5 + TSS region transcription start site region 69112
Tssr69113 7 126928909 to 126928926 17 + TSS region transcription start site region 69113
Gm44735 7 126938886 to 126940637 1751 + unclassified gene predicted gene 44735
Tssr69114 7 126941360 to 126941402 42 + TSS region transcription start site region 69114
Tssr69115 7 126941968 to 126941974 6 + TSS region transcription start site region 69115
Tssr69116 7 126942037 to 126942053 16 + TSS region transcription start site region 69116
Tssr69117 7 126942060 to 126942074 14 + TSS region transcription start site region 69117
Tssr69118 7 126942081 to 126942092 11 + TSS region transcription start site region 69118
Tssr69119 7 126942108 to 126942119 11 + TSS region transcription start site region 69119
Tssr69120 7 126942139 to 126942159 20 + TSS region transcription start site region 69120
Gm21984 7 126942144 to 126952873 10729 + unclassified non-coding RNA gene predicted gene 21984
Tssr69121 7 126945112 to 126945139 27 + TSS region transcription start site region 69121
Tssr69122 7 126945200 to 126945215 15 + TSS region transcription start site region 69122
Asphd1 7 126945567 to 126949582 4015 - protein coding gene aspartate beta-hydroxylase domain containing 1
Cpgi19723 7 126949482 to 126950138 656 CpG island CpG island 19723
Tssr74862 7 126949499 to 126949521 22 - TSS region transcription start site region 74862
Tssr74863 7 126949859 to 126949889 30 - TSS region transcription start site region 74863
Tssr74864 7 126949894 to 126949939 45 - TSS region transcription start site region 74864
Tssr69123 7 126950020 to 126950055 35 + TSS region transcription start site region 69123
Tssr69124 7 126950498 to 126950503 5 + TSS region transcription start site region 69124
Tssr69125 7 126950505 to 126950516 11 + TSS region transcription start site region 69125
Tssr69126 7 126950518 to 126950583 65 + TSS region transcription start site region 69126
Sez6l2 7 126950563 to 126970606 20043 + protein coding gene seizure related 6 homolog like 2
Tssr69127 7 126950598 to 126950609 11 + TSS region transcription start site region 69127
Tssr69128 7 126950687 to 126950698 11 + TSS region transcription start site region 69128
Tssr69129 7 126950811 to 126950829 18 + TSS region transcription start site region 69129
Tssr69130 7 126950837 to 126950848 11 + TSS region transcription start site region 69130
Tssr69131 7 126952087 to 126952098 11 + TSS region transcription start site region 69131
Tssr69132 7 126953010 to 126953026 16 + TSS region transcription start site region 69132
D7Mit188 7 126955893 to 126956036 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 188
Tssr69133 7 126959808 to 126959813 5 + TSS region transcription start site region 69133
Tssr69134 7 126961746 to 126961764 18 + TSS region transcription start site region 69134
Tssr69135 7 126965018 to 126965024 6 + TSS region transcription start site region 69135
Tssr69136 7 126966603 to 126966637 34 + TSS region transcription start site region 69136
Tssr69137 7 126967535 to 126967544 9 + TSS region transcription start site region 69137
Tssr69138 7 126967555 to 126967561 6 + TSS region transcription start site region 69138
Tssr69139 7 126967569 to 126967597 28 + TSS region transcription start site region 69139
Cdiptos 7 126972620 to 126976167 3547 - protein coding gene CDIP transferase, opposite strand
Tssr69140 7 126974365 to 126974369 4 + TSS region transcription start site region 69140
Tssr74865 7 126975400 to 126975416 16 - TSS region transcription start site region 74865
Tssr69141 7 126975615 to 126975624 9 + TSS region transcription start site region 69141
Tssr74866 7 126975787 to 126975843 56 - TSS region transcription start site region 74866
Cpgi19724 7 126975790 to 126977044 1254 CpG island CpG island 19724
Tssr74867 7 126975844 to 126975847 3 - TSS region transcription start site region 74867
Cdipt 7 126975914 to 126980501 4587 + protein coding gene CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
Tssr74868 7 126976092 to 126976105 13 - TSS region transcription start site region 74868
Tssr74869 7 126976124 to 126976131 7 - TSS region transcription start site region 74869
Tssr74870 7 126976132 to 126976142 10 - TSS region transcription start site region 74870
Tssr69142 7 126976279 to 126976297 18 + TSS region transcription start site region 69142
Tssr69143 7 126976338 to 126976400 62 + TSS region transcription start site region 69143
Tssr69144 7 126976407 to 126976422 15 + TSS region transcription start site region 69144
Tssr69145 7 126976432 to 126976466 34 + TSS region transcription start site region 69145
Tssr69146 7 126976524 to 126976544 20 + TSS region transcription start site region 69146
Tssr69147 7 126976547 to 126976577 30 + TSS region transcription start site region 69147
Tssr2401 7 126976580 to 126976598 18 + TSS region transcription start site region 2401
Tssr69148 7 126976610 to 126976619 9 + TSS region transcription start site region 69148
Tssr69149 7 126979033 to 126979070 37 + TSS region transcription start site region 69149
Tssr69150 7 126983479 to 126983480 1 + TSS region transcription start site region 69150
Mvp 7 126986860 to 127014594 27734 - protein coding gene major vault protein
Pagr1b 7 127001480 to 127016484 15004 - protein coding gene PAXIP1 associated glutamate rich protein 1B
Tssr74871 7 127001893 to 127001919 26 - TSS region transcription start site region 74871
Tssr74872 7 127001941 to 127001948 7 - TSS region transcription start site region 74872
Tssr74873 7 127003763 to 127003786 23 - TSS region transcription start site region 74873
Tssr74874 7 127011868 to 127011877 9 - TSS region transcription start site region 74874
Tssr74875 7 127014535 to 127014583 48 - TSS region transcription start site region 74875
Tssr74876 7 127014585 to 127014605 20 - TSS region transcription start site region 74876
Tssr69151 7 127014653 to 127014663 10 + TSS region transcription start site region 69151
Gm42742 7 127015051 to 127021097 6046 - protein coding gene predicted gene 42742
Pagr1a 7 127015051 to 127017352 2301 - protein coding gene PAXIP1 associated glutamate rich protein 1A
Cpgi19725 7 127016502 to 127017520 1018 CpG island CpG island 19725
Tssr74877 7 127016540 to 127016603 63 - TSS region transcription start site region 74877
Tssr74878 7 127016611 to 127016622 11 - TSS region transcription start site region 74878
Tssr69152 7 127016657 to 127016672 15 + TSS region transcription start site region 69152
Tssr74879 7 127016829 to 127016857 28 - TSS region transcription start site region 74879
Tssr74880 7 127017002 to 127017032 30 - TSS region transcription start site region 74880
Tssr74881 7 127017035 to 127017064 29 - TSS region transcription start site region 74881
Tssr74882 7 127017251 to 127017262 11 - TSS region transcription start site region 74882
Tssr74883 7 127017266 to 127017292 26 - TSS region transcription start site region 74883
Tssr74884 7 127017301 to 127017343 42 - TSS region transcription start site region 74884
Tssr74885 7 127017364 to 127017392 28 - TSS region transcription start site region 74885
Prrt2 7 127017535 to 127021211 3676 - protein coding gene proline-rich transmembrane protein 2