Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:12668090-12903635

34 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vmn2r55	7	12651706 to 12684991	33285	-	protein coding gene	vomeronasal 2, receptor 55
Vmn2r56	7	12693860 to 12733320	39460	-	protein coding gene	vomeronasal 2, receptor 56
Gm6946	7	12742686 to 12743672	986	+	pseudogene	predicted gene 6946
Gm18205	7	12760708 to 12761548	840	+	pseudogene	predicted gene, 18205
Zscan18	7	12768090 to 12803635	35545	-	protein coding gene	zinc finger and SCAN domain containing 18
Cpgi18315	7	12779893 to 12781118	1225		CpG island	CpG island 18315
Tssr70621	7	12780607 to 12780679	72	-	TSS region	transcription start site region 70621
1700047O18Rik	7	12780860 to 12781602	742	+	unclassified gene	RIKEN cDNA 1700047O18 gene
Gm4247	7	12793828 to 12794869	1041	-	pseudogene	predicted gene 4247
Gm18194	7	12796855 to 12797491	636	-	pseudogene	predicted gene, 18194
Gm45315	7	12797529 to 12797861	332	+	pseudogene	predicted gene 45315
Cpgi18316	7	12803219 to 12803956	737		CpG island	CpG island 18316
A930003G23Rik	7	12803545 to 12804778	1233		unclassified gene	RIKEN cDNA A930003G23 gene
Tssr70622	7	12803607 to 12803644	37	-	TSS region	transcription start site region 70622
Zfp329	7	12804977 to 12818858	13881	-	protein coding gene	zinc finger protein 329
Tssr70623	7	12807309 to 12807314	5	-	TSS region	transcription start site region 70623
Cpgi18317	7	12818398 to 12819011	613		CpG island	CpG island 18317
Tssr70624	7	12818837 to 12818865	28	-	TSS region	transcription start site region 70624
Tssr70625	7	12818866 to 12818871	5	-	TSS region	transcription start site region 70625
Gm45593	7	12825918 to 12828121	2203	+	lincRNA gene	predicted gene 45593
Cpgi18318	7	12834551 to 12835419	868		CpG island	CpG island 18318
Tssr64479	7	12834743 to 12834811	68	+	TSS region	transcription start site region 64479
Zfp110	7	12834810 to 12850584	15774	+	protein coding gene	zinc finger protein 110
Tssr64480	7	12834973 to 12835052	79	+	TSS region	transcription start site region 64480
Tssr64481	7	12835248 to 12835261	13	+	TSS region	transcription start site region 64481
Tssr64482	7	12835950 to 12835954	4	+	TSS region	transcription start site region 64482
Gm31152	7	12864284 to 12869804	5520	-	lincRNA gene	predicted gene, 31152
Gm45971	7	12870869 to 12873480	2611	-	lncRNA gene	predicted gene, 45971
Cpgi18319	7	12880840 to 12881677	837		CpG island	CpG island 18319
Tssr64483	7	12881165 to 12881204	39	+	TSS region	transcription start site region 64483
Zfp128	7	12881178 to 12893422	12244	+	protein coding gene	zinc finger protein 128
Cpgi18320	7	12897687 to 12898154	467		CpG island	CpG island 18320
Tssr64484	7	12897800 to 12897885	85	+	TSS region	transcription start site region 64484
Zscan22	7	12897815 to 12909083	11268	+	protein coding gene	zinc finger and SCAN domain containing 22