Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:126599082-126699808

40 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr74784	7	126601337 to 126601348	11	-	TSS region	transcription start site region 74784
Gm39086	7	126615585 to 126618481	2896	-	lncRNA gene	predicted gene, 39086
Gm39087	7	126621769 to 126635179	13410	+	lncRNA gene	predicted gene, 39087
Tssr69045	7	126622904 to 126622905	1	+	TSS region	transcription start site region 69045
Tssr69046	7	126623245 to 126623255	10	+	TSS region	transcription start site region 69046
Nupr1	7	126623246 to 126625470	2224	-	protein coding gene	nuclear protein transcription regulator 1
Tssr69047	7	126623447 to 126623484	37	+	TSS region	transcription start site region 69047
Tssr74785	7	126625048 to 126625061	13	-	TSS region	transcription start site region 74785
Tssr74786	7	126625482 to 126625496	14	-	TSS region	transcription start site region 74786
Tssr74787	7	126625939 to 126625970	31	-	TSS region	transcription start site region 74787
2510046G10Rik	7	126648543 to 126649594	1051	-	antisense lncRNA gene	RIKEN cDNA 2510046G10 gene
Cpgi19703	7	126649082 to 126649808	726		CpG island	CpG island 19703
Tssr69048	7	126649297 to 126649344	47	+	TSS region	transcription start site region 69048
Sgf29	7	126649298 to 126672779	23481	+	protein coding gene	SAGA complex associated factor 29
Tssr69049	7	126649350 to 126649367	17	+	TSS region	transcription start site region 69049
Tssr69050	7	126649377 to 126649388	11	+	TSS region	transcription start site region 69050
Tssr69051	7	126649410 to 126649432	22	+	TSS region	transcription start site region 69051
Tssr74788	7	126649524 to 126649535	11	-	TSS region	transcription start site region 74788
Tssr74789	7	126649556 to 126649580	24	-	TSS region	transcription start site region 74789
Tssr69052	7	126656024 to 126656044	20	+	TSS region	transcription start site region 69052
Tssr69053	7	126663916 to 126663924	8	+	TSS region	transcription start site region 69053
Tssr69054	7	126663945 to 126663971	26	+	TSS region	transcription start site region 69054
D930031A20Rik	7	126667957 to 126669152	1195		unclassified non-coding RNA gene	RIKEN cDNA D930031A20 gene
Sult1a1	7	126672865 to 126676432	3567	-	protein coding gene	sulfotransferase family 1A, phenol-preferring, member 1
Tssr74790	7	126675584 to 126675593	9	-	TSS region	transcription start site region 74790
Tssr74791	7	126676210 to 126676231	21	-	TSS region	transcription start site region 74791
Tssr74792	7	126676366 to 126676383	17	-	TSS region	transcription start site region 74792
Tssr74793	7	126676428 to 126676439	11	-	TSS region	transcription start site region 74793
Gm6939	7	126688375 to 126688687	312	-	pseudogene	predicted gene 6939
Slx1b	7	126689468 to 126695784	6316	-	protein coding gene	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
Del(7Slx1b-Sept1)4Aam	7	126689468 to 127232987	543519		chromosomal deletion	deletion, Chr 7, Alea A Mills 4
Dp(7Slx1b-Sept1)5Aam	7	126689468 to 127232987	543519		chromosomal duplication	duplication, Chr 7, Alea A Mills 5
Cpgi19704	7	126692321 to 126692788	467		CpG island	CpG island 19704
Cpgi19705	7	126695339 to 126696653	1314		CpG island	CpG island 19705
Tssr69055	7	126695355 to 126695431	76	+	TSS region	transcription start site region 69055
Tssr74794	7	126695714 to 126695728	14	-	TSS region	transcription start site region 74794
Tssr74795	7	126695731 to 126695788	57	-	TSS region	transcription start site region 74795
Tssr69056	7	126695942 to 126696009	67	+	TSS region	transcription start site region 69056
Bola2	7	126696000 to 126696693	693	+	protein coding gene	bolA-like 2 (E. coli)
Coro1a	7	126699774 to 126704816	5042	-	protein coding gene	coronin, actin binding protein 1A