Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:126489736-126919762

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294 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tufm 7 126487361 to 126490731 3370 + protein coding gene Tu translation elongation factor, mitochondrial
Atxn2l 7 126491708 to 126503437 11729 - protein coding gene ataxin 2-like
Tssr74723 7 126492298 to 126492318 20 - TSS region transcription start site region 74723
Tssr74724 7 126494200 to 126494274 74 - TSS region transcription start site region 74724
Tssr74725 7 126494320 to 126494341 21 - TSS region transcription start site region 74725
Tssr74726 7 126495430 to 126495478 48 - TSS region transcription start site region 74726
Tssr74727 7 126496460 to 126496493 33 - TSS region transcription start site region 74727
Cpgi19699 7 126501754 to 126503886 2132 CpG island CpG island 19699
Tssr74728 7 126501952 to 126501960 8 - TSS region transcription start site region 74728
Tssr74729 7 126501980 to 126502049 69 - TSS region transcription start site region 74729
Tssr74730 7 126502094 to 126502109 15 - TSS region transcription start site region 74730
Tssr74731 7 126502312 to 126502351 39 - TSS region transcription start site region 74731
4930456A14Rik 7 126502347 to 126532013 29666 + lncRNA gene RIKEN cDNA 4930456A14 gene
Tssr74732 7 126502356 to 126502376 20 - TSS region transcription start site region 74732
Tssr74733 7 126502380 to 126502419 39 - TSS region transcription start site region 74733
Tssr69029 7 126502625 to 126502655 30 + TSS region transcription start site region 69029
Tssr74734 7 126503267 to 126503284 17 - TSS region transcription start site region 74734
Tssr74735 7 126503298 to 126503405 107 - TSS region transcription start site region 74735
Tssr74736 7 126503408 to 126503477 69 - TSS region transcription start site region 74736
Tssr74737 7 126503583 to 126503594 11 - TSS region transcription start site region 74737
Tssr74738 7 126503603 to 126503613 10 - TSS region transcription start site region 74738
Tssr74739 7 126503638 to 126503643 5 - TSS region transcription start site region 74739
Tssr74740 7 126503658 to 126503677 19 - TSS region transcription start site region 74740
Cpgi19700 7 126535807 to 126536279 472 CpG island CpG island 19700
Eif3c 7 126546911 to 126566366 19455 - protein coding gene eukaryotic translation initiation factor 3, subunit C
Tssr69030 7 126558922 to 126558982 60 + TSS region transcription start site region 69030
Tssr74741 7 126562639 to 126562660 21 - TSS region transcription start site region 74741
Tssr74742 7 126563067 to 126563099 32 - TSS region transcription start site region 74742
Tssr74743 7 126563268 to 126563309 41 - TSS region transcription start site region 74743
Tssr69031 7 126563680 to 126563726 46 + TSS region transcription start site region 69031
Tssr74744 7 126563685 to 126563711 26 - TSS region transcription start site region 74744
Gm24596 7 126563874 to 126563980 106 - snRNA gene predicted gene, 24596
Tssr74745 7 126564458 to 126564484 26 - TSS region transcription start site region 74745
Tssr74746 7 126564498 to 126564540 42 - TSS region transcription start site region 74746
Tssr74747 7 126564587 to 126564612 25 - TSS region transcription start site region 74747
Tssr74748 7 126564733 to 126564753 20 - TSS region transcription start site region 74748
Tssr74749 7 126564761 to 126564779 18 - TSS region transcription start site region 74749
Cpgi19701 7 126565709 to 126566521 812 CpG island CpG island 19701
G730046D07Rik 7 126565919 to 126566858 939 protein coding gene RIKEN cDNA G730046D07 gene
Tssr74750 7 126566107 to 126566127 20 - TSS region transcription start site region 74750
Tssr74751 7 126566180 to 126566209 29 - TSS region transcription start site region 74751
Tssr74752 7 126566349 to 126566354 5 - TSS region transcription start site region 74752
Tssr74753 7 126566364 to 126566416 52 - TSS region transcription start site region 74753
Gm25579 7 126567044 to 126567149 105 - snRNA gene predicted gene, 25579
Cln3 7 126571400 to 126585817 14417 - protein coding gene ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
Tssr74754 7 126579223 to 126579237 14 - TSS region transcription start site region 74754
Mir7059 7 126579474 to 126579532 58 - miRNA gene microRNA 7059
Tssr74755 7 126581763 to 126581776 13 - TSS region transcription start site region 74755
Cpgi19702 7 126582869 to 126583598 729 CpG island CpG island 19702
Tssr74756 7 126583177 to 126583255 78 - TSS region transcription start site region 74756
Tssr74757 7 126583327 to 126583371 44 - TSS region transcription start site region 74757
Tssr74758 7 126583547 to 126583578 31 - TSS region transcription start site region 74758
Tssr74759 7 126584384 to 126584397 13 - TSS region transcription start site region 74759
Tssr74760 7 126584412 to 126584433 21 - TSS region transcription start site region 74760
Tssr74761 7 126584544 to 126584609 65 - TSS region transcription start site region 74761
Tssr74762 7 126584616 to 126584627 11 - TSS region transcription start site region 74762
Tssr74763 7 126584635 to 126584648 13 - TSS region transcription start site region 74763
Tssr74764 7 126584798 to 126584817 19 - TSS region transcription start site region 74764
Tssr74765 7 126584822 to 126584833 11 - TSS region transcription start site region 74765
Tssr74766 7 126584863 to 126584889 26 - TSS region transcription start site region 74766
Tssr69032 7 126584937 to 126584947 10 + TSS region transcription start site region 69032
Apobr 7 126584942 to 126589112 4170 + protein coding gene apolipoprotein B receptor
Tssr69033 7 126584948 to 126584953 5 + TSS region transcription start site region 69033
Tssr69034 7 126584968 to 126584988 20 + TSS region transcription start site region 69034
Tssr74767 7 126585528 to 126585591 63 - TSS region transcription start site region 74767
Tssr69035 7 126585533 to 126585549 16 + TSS region transcription start site region 69035
Tssr69036 7 126585603 to 126585621 18 + TSS region transcription start site region 69036
Tssr74768 7 126585775 to 126585840 65 - TSS region transcription start site region 74768
Tssr69037 7 126585876 to 126585887 11 + TSS region transcription start site region 69037
Tssr69038 7 126585910 to 126585924 14 + TSS region transcription start site region 69038
Tssr69039 7 126585929 to 126585943 14 + TSS region transcription start site region 69039
Tssr69040 7 126586154 to 126586168 14 + TSS region transcription start site region 69040
Tssr74769 7 126587533 to 126587537 4 - TSS region transcription start site region 74769
Tssr74770 7 126587559 to 126587571 12 - TSS region transcription start site region 74770
Il27 7 126589010 to 126594941 5931 - protein coding gene interleukin 27
Tssr74771 7 126589165 to 126589176 11 - TSS region transcription start site region 74771
Tssr74772 7 126589238 to 126589249 11 - TSS region transcription start site region 74772
Tssr74773 7 126589256 to 126589273 17 - TSS region transcription start site region 74773
Tssr74774 7 126589299 to 126589304 5 - TSS region transcription start site region 74774
Tssr69041 7 126589395 to 126589427 32 + TSS region transcription start site region 69041
Tssr74775 7 126589401 to 126589406 5 - TSS region transcription start site region 74775
Tssr74776 7 126589408 to 126589415 7 - TSS region transcription start site region 74776
Tssr74777 7 126589447 to 126589464 17 - TSS region transcription start site region 74777
Tssr74778 7 126589820 to 126589845 25 - TSS region transcription start site region 74778
Tssr74779 7 126590056 to 126590084 28 - TSS region transcription start site region 74779
Tssr74780 7 126590253 to 126590256 3 - TSS region transcription start site region 74780
Tssr74781 7 126592873 to 126592884 11 - TSS region transcription start site region 74781
Tssr74782 7 126594925 to 126594939 14 - TSS region transcription start site region 74782
Tssr74783 7 126595012 to 126595037 25 - TSS region transcription start site region 74783
Tssr69042 7 126595134 to 126595187 53 + TSS region transcription start site region 69042
Tssr69043 7 126595199 to 126595204 5 + TSS region transcription start site region 69043
Tssr69044 7 126595223 to 126595236 13 + TSS region transcription start site region 69044
Tssr74784 7 126601337 to 126601348 11 - TSS region transcription start site region 74784
Gm39086 7 126615585 to 126618481 2896 - lncRNA gene predicted gene, 39086
Gm39087 7 126621769 to 126635179 13410 + lncRNA gene predicted gene, 39087
Tssr69045 7 126622904 to 126622905 1 + TSS region transcription start site region 69045
Tssr69046 7 126623245 to 126623255 10 + TSS region transcription start site region 69046
Nupr1 7 126623246 to 126625470 2224 - protein coding gene nuclear protein transcription regulator 1
Tssr69047 7 126623447 to 126623484 37 + TSS region transcription start site region 69047
Tssr74785 7 126625048 to 126625061 13 - TSS region transcription start site region 74785
Tssr74786 7 126625482 to 126625496 14 - TSS region transcription start site region 74786
Tssr74787 7 126625939 to 126625970 31 - TSS region transcription start site region 74787
2510046G10Rik 7 126648543 to 126649594 1051 - antisense lncRNA gene RIKEN cDNA 2510046G10 gene
Cpgi19703 7 126649082 to 126649808 726 CpG island CpG island 19703
Tssr69048 7 126649297 to 126649344 47 + TSS region transcription start site region 69048
Sgf29 7 126649298 to 126672779 23481 + protein coding gene SAGA complex associated factor 29
Tssr69049 7 126649350 to 126649367 17 + TSS region transcription start site region 69049
Tssr69050 7 126649377 to 126649388 11 + TSS region transcription start site region 69050
Tssr69051 7 126649410 to 126649432 22 + TSS region transcription start site region 69051
Tssr74788 7 126649524 to 126649535 11 - TSS region transcription start site region 74788
Tssr74789 7 126649556 to 126649580 24 - TSS region transcription start site region 74789
Tssr69052 7 126656024 to 126656044 20 + TSS region transcription start site region 69052
Tssr69053 7 126663916 to 126663924 8 + TSS region transcription start site region 69053
Tssr69054 7 126663945 to 126663971 26 + TSS region transcription start site region 69054
D930031A20Rik 7 126667957 to 126669152 1195 unclassified non-coding RNA gene RIKEN cDNA D930031A20 gene
Sult1a1 7 126672865 to 126676432 3567 - protein coding gene sulfotransferase family 1A, phenol-preferring, member 1
Tssr74790 7 126675584 to 126675593 9 - TSS region transcription start site region 74790
Tssr74791 7 126676210 to 126676231 21 - TSS region transcription start site region 74791
Tssr74792 7 126676366 to 126676383 17 - TSS region transcription start site region 74792
Tssr74793 7 126676428 to 126676439 11 - TSS region transcription start site region 74793
Gm6939 7 126688375 to 126688687 312 - pseudogene predicted gene 6939
Dp(7Slx1b-Sept1)5Aam 7 126689468 to 127232987 543519 chromosomal duplication duplication, Chr 7, Alea A Mills 5
Del(7Slx1b-Sept1)4Aam 7 126689468 to 127232987 543519 chromosomal deletion deletion, Chr 7, Alea A Mills 4
Slx1b 7 126689468 to 126695784 6316 - protein coding gene SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
Cpgi19704 7 126692321 to 126692788 467 CpG island CpG island 19704
Cpgi19705 7 126695339 to 126696653 1314 CpG island CpG island 19705
Tssr69055 7 126695355 to 126695431 76 + TSS region transcription start site region 69055
Tssr74794 7 126695714 to 126695728 14 - TSS region transcription start site region 74794
Tssr74795 7 126695731 to 126695788 57 - TSS region transcription start site region 74795
Tssr69056 7 126695942 to 126696009 67 + TSS region transcription start site region 69056
Bola2 7 126696000 to 126696693 693 + protein coding gene bolA-like 2 (E. coli)
Coro1a 7 126699774 to 126704816 5042 - protein coding gene coronin, actin binding protein 1A
Tssr74796 7 126700378 to 126700398 20 - TSS region transcription start site region 74796
Tssr69057 7 126700661 to 126700666 5 + TSS region transcription start site region 69057
Tssr74797 7 126700903 to 126700913 10 - TSS region transcription start site region 74797
Tssr74798 7 126701143 to 126701170 27 - TSS region transcription start site region 74798
Tssr74799 7 126701172 to 126701191 19 - TSS region transcription start site region 74799
Cpgi19706 7 126701211 to 126701787 576 CpG island CpG island 19706
Tssr74800 7 126702469 to 126702486 17 - TSS region transcription start site region 74800
Tssr74801 7 126702496 to 126702517 21 - TSS region transcription start site region 74801
Tssr74802 7 126703143 to 126703166 23 - TSS region transcription start site region 74802
Tssr74803 7 126704127 to 126704172 45 - TSS region transcription start site region 74803
Tssr74804 7 126704179 to 126704195 16 - TSS region transcription start site region 74804
Cpgi19707 7 126704237 to 126705043 806 CpG island CpG island 19707
Tssr74805 7 126704522 to 126704542 20 - TSS region transcription start site region 74805
Tssr74806 7 126704704 to 126704711 7 - TSS region transcription start site region 74806
Tssr74807 7 126704736 to 126704762 26 - TSS region transcription start site region 74807
Tssr74808 7 126704775 to 126704806 31 - TSS region transcription start site region 74808
Tssr74809 7 126704847 to 126704854 7 - TSS region transcription start site region 74809
Tssr74810 7 126704888 to 126704906 18 - TSS region transcription start site region 74810
Tssr74811 7 126707832 to 126707864 32 - TSS region transcription start site region 74811
Snrp1c-ps1 7 126723936 to 126724306 370 + pseudogene U1 small nuclear ribonucleoprotein 1C, pseudogene 1
Cpgi19708 7 126739614 to 126739830 216 CpG island CpG island 19708
4930448A20Rik 7 126740629 to 126742181 1552 + lincRNA gene RIKEN cDNA 4930448A20 gene
Gm44824 7 126742682 to 126742910 228 + pseudogene predicted gene 44824
Tssr74812 7 126746851 to 126746890 39 - TSS region transcription start site region 74812
Gm44855 7 126749555 to 126749916 361 + pseudogene predicted gene 44855
Cpgi19709 7 126759216 to 126760338 1122 CpG island CpG island 19709
Tssr69058 7 126759598 to 126759608 10 + TSS region transcription start site region 69058
Tssr69059 7 126759613 to 126759651 38 + TSS region transcription start site region 69059
Mapk3 7 126759626 to 126765816 6190 + protein coding gene mitogen-activated protein kinase 3
Tssr69060 7 126759682 to 126759710 28 + TSS region transcription start site region 69060
Tssr69061 7 126759729 to 126759762 33 + TSS region transcription start site region 69061
Tssr69062 7 126759780 to 126759789 9 + TSS region transcription start site region 69062
Tssr69063 7 126760591 to 126760599 8 + TSS region transcription start site region 69063
Tssr69064 7 126760647 to 126760653 6 + TSS region transcription start site region 69064
Tssr69065 7 126760698 to 126760744 46 + TSS region transcription start site region 69065
Tssr69066 7 126762217 to 126762221 4 + TSS region transcription start site region 69066
Tssr69067 7 126762869 to 126762882 13 + TSS region transcription start site region 69067
Tssr69068 7 126762884 to 126762900 16 + TSS region transcription start site region 69068
Tssr69069 7 126762904 to 126762926 22 + TSS region transcription start site region 69069
Tssr69070 7 126763133 to 126763148 15 + TSS region transcription start site region 69070
Tssr69071 7 126763770 to 126763796 26 + TSS region transcription start site region 69071
Tssr69072 7 126763802 to 126763817 15 + TSS region transcription start site region 69072
Tssr69073 7 126764283 to 126764295 12 + TSS region transcription start site region 69073
Tssr69074 7 126766397 to 126766425 28 + TSS region transcription start site region 69074
Gdpd3 7 126766414 to 126775645 9231 + protein coding gene glycerophosphodiester phosphodiesterase domain containing 3
Tssr69075 7 126766430 to 126766452 22 + TSS region transcription start site region 69075
Gm9967 7 126768082 to 126776818 8736 - unclassified non-coding RNA gene predicted gene 9967
Tssr69076 7 126770977 to 126771028 51 + TSS region transcription start site region 69076
Tssr69077 7 126771098 to 126771119 21 + TSS region transcription start site region 69077
Cpgi19710 7 126776637 to 126777353 716 CpG island CpG island 19710
Tssr74813 7 126776774 to 126776855 81 - TSS region transcription start site region 74813
Tssr69078 7 126776939 to 126777004 65 + TSS region transcription start site region 69078
Ypel3 7 126776975 to 126780514 3539 + protein coding gene yippee like 3
Tssr2396 7 126777128 to 126777135 7 + TSS region transcription start site region 2396
Tssr2397 7 126777157 to 126777178 21 + TSS region transcription start site region 2397
Tssr2398 7 126777181 to 126777192 11 + TSS region transcription start site region 2398
Tssr69079 7 126777766 to 126777798 32 + TSS region transcription start site region 69079
Tssr69080 7 126780287 to 126780301 14 + TSS region transcription start site region 69080
Cpgi19711 7 126780645 to 126780887 242 CpG island CpG island 19711
Tbx6 7 126781483 to 126785548 4065 + protein coding gene T-box 6
Ppp4c 7 126785866 to 126792471 6605 - protein coding gene protein phosphatase 4, catalytic subunit
Cpgi19712 7 126791740 to 126792734 994 CpG island CpG island 19712
Tssr74814 7 126792143 to 126792172 29 - TSS region transcription start site region 74814
Tssr74815 7 126792173 to 126792209 36 - TSS region transcription start site region 74815
Tssr74816 7 126792216 to 126792239 23 - TSS region transcription start site region 74816
Tssr74817 7 126792356 to 126792365 9 - TSS region transcription start site region 74817
Tssr74818 7 126792446 to 126792455 9 - TSS region transcription start site region 74818
Tssr74819 7 126792469 to 126792478 9 - TSS region transcription start site region 74819