Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:126457347-126577013

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp2a1 7 126445860 to 126463103 17243 - protein coding gene ATPase, Ca++ transporting, cardiac muscle, fast twitch 1
Tssr74704 7 126457975 to 126457993 18 - TSS region transcription start site region 74704
Tssr2395 7 126458606 to 126458647 41 - TSS region transcription start site region 2395
Tssr74705 7 126458891 to 126458902 11 - TSS region transcription start site region 74705
Tssr74706 7 126458923 to 126458932 9 - TSS region transcription start site region 74706
Tssr69025 7 126459646 to 126459689 43 + TSS region transcription start site region 69025
Tssr74707 7 126459717 to 126459729 12 - TSS region transcription start site region 74707
Tssr74708 7 126459742 to 126459749 7 - TSS region transcription start site region 74708
Tssr74709 7 126460772 to 126460783 11 - TSS region transcription start site region 74709
Tssr74710 7 126460916 to 126460927 11 - TSS region transcription start site region 74710
Tssr74711 7 126461665 to 126461676 11 - TSS region transcription start site region 74711
Tssr74712 7 126461687 to 126461709 22 - TSS region transcription start site region 74712
Tssr74713 7 126462156 to 126462175 19 - TSS region transcription start site region 74713
Tssr74714 7 126463100 to 126463115 15 - TSS region transcription start site region 74714
Tssr74715 7 126463297 to 126463307 10 - TSS region transcription start site region 74715
Sh2b1 7 126466993 to 126475265 8272 - protein coding gene SH2B adaptor protein 1
Tssr74716 7 126470192 to 126470216 24 - TSS region transcription start site region 74716
Tssr69026 7 126470385 to 126470396 11 + TSS region transcription start site region 69026
Tssr74717 7 126471444 to 126471489 45 - TSS region transcription start site region 74717
Tssr74718 7 126472383 to 126472395 12 - TSS region transcription start site region 74718
Tssr74719 7 126472414 to 126472437 23 - TSS region transcription start site region 74719
Cpgi19695 7 126472726 to 126472886 160 CpG island CpG island 19695
Cpgi19696 7 126474480 to 126475683 1203 CpG island CpG island 19696
Tssr74720 7 126474934 to 126474979 45 - TSS region transcription start site region 74720
Tssr74721 7 126475055 to 126475079 24 - TSS region transcription start site region 74721
Tssr74722 7 126475082 to 126475120 38 - TSS region transcription start site region 74722
C530001K22Rik 7 126475194 to 126476251 1057 unclassified non-coding RNA gene RIKEN cDNA C530001K22 gene
Cpgi19697 7 126482461 to 126482616 155 CpG island CpG island 19697
Gm46001 7 126484340 to 126486514 2174 - lncRNA gene predicted gene, 46001
Cpgi19698 7 126487110 to 126487911 801 CpG island CpG island 19698
Tssr69027 7 126487255 to 126487266 11 + TSS region transcription start site region 69027
Tssr69028 7 126487344 to 126487390 46 + TSS region transcription start site region 69028
Tufm 7 126487361 to 126490731 3370 + protein coding gene Tu translation elongation factor, mitochondrial
Atxn2l 7 126491708 to 126503437 11729 - protein coding gene ataxin 2-like
Tssr74723 7 126492298 to 126492318 20 - TSS region transcription start site region 74723
Tssr74724 7 126494200 to 126494274 74 - TSS region transcription start site region 74724
Tssr74725 7 126494320 to 126494341 21 - TSS region transcription start site region 74725
Tssr74726 7 126495430 to 126495478 48 - TSS region transcription start site region 74726
Tssr74727 7 126496460 to 126496493 33 - TSS region transcription start site region 74727
Cpgi19699 7 126501754 to 126503886 2132 CpG island CpG island 19699
Tssr74728 7 126501952 to 126501960 8 - TSS region transcription start site region 74728
Tssr74729 7 126501980 to 126502049 69 - TSS region transcription start site region 74729
Tssr74730 7 126502094 to 126502109 15 - TSS region transcription start site region 74730
Tssr74731 7 126502312 to 126502351 39 - TSS region transcription start site region 74731
4930456A14Rik 7 126502347 to 126532013 29666 + lncRNA gene RIKEN cDNA 4930456A14 gene
Tssr74732 7 126502356 to 126502376 20 - TSS region transcription start site region 74732
Tssr74733 7 126502380 to 126502419 39 - TSS region transcription start site region 74733
Tssr69029 7 126502625 to 126502655 30 + TSS region transcription start site region 69029
Tssr74734 7 126503267 to 126503284 17 - TSS region transcription start site region 74734
Tssr74735 7 126503298 to 126503405 107 - TSS region transcription start site region 74735
Tssr74736 7 126503408 to 126503477 69 - TSS region transcription start site region 74736
Tssr74737 7 126503583 to 126503594 11 - TSS region transcription start site region 74737
Tssr74738 7 126503603 to 126503613 10 - TSS region transcription start site region 74738
Tssr74739 7 126503638 to 126503643 5 - TSS region transcription start site region 74739
Tssr74740 7 126503658 to 126503677 19 - TSS region transcription start site region 74740
Cpgi19700 7 126535807 to 126536279 472 CpG island CpG island 19700
Eif3c 7 126546911 to 126566366 19455 - protein coding gene eukaryotic translation initiation factor 3, subunit C
Tssr69030 7 126558922 to 126558982 60 + TSS region transcription start site region 69030
Tssr74741 7 126562639 to 126562660 21 - TSS region transcription start site region 74741
Tssr74742 7 126563067 to 126563099 32 - TSS region transcription start site region 74742
Tssr74743 7 126563268 to 126563309 41 - TSS region transcription start site region 74743
Tssr69031 7 126563680 to 126563726 46 + TSS region transcription start site region 69031
Tssr74744 7 126563685 to 126563711 26 - TSS region transcription start site region 74744
Gm24596 7 126563874 to 126563980 106 - snRNA gene predicted gene, 24596
Tssr74745 7 126564458 to 126564484 26 - TSS region transcription start site region 74745
Tssr74746 7 126564498 to 126564540 42 - TSS region transcription start site region 74746
Tssr74747 7 126564587 to 126564612 25 - TSS region transcription start site region 74747
Tssr74748 7 126564733 to 126564753 20 - TSS region transcription start site region 74748
Tssr74749 7 126564761 to 126564779 18 - TSS region transcription start site region 74749
Cpgi19701 7 126565709 to 126566521 812 CpG island CpG island 19701
G730046D07Rik 7 126565919 to 126566858 939 protein coding gene RIKEN cDNA G730046D07 gene
Tssr74750 7 126566107 to 126566127 20 - TSS region transcription start site region 74750
Tssr74751 7 126566180 to 126566209 29 - TSS region transcription start site region 74751
Tssr74752 7 126566349 to 126566354 5 - TSS region transcription start site region 74752
Tssr74753 7 126566364 to 126566416 52 - TSS region transcription start site region 74753
Gm25579 7 126567044 to 126567149 105 - snRNA gene predicted gene, 25579
Cln3 7 126571400 to 126585817 14417 - protein coding gene ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)