Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:126387110-126587911

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170 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nfatc2ip 7 126382854 to 126396737 13883 - protein coding gene nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein
Tssr69019 7 126395550 to 126395553 3 + TSS region transcription start site region 69019
Gm45141 7 126395858 to 126397745 1887 + unclassified gene predicted gene 45141
Cpgi19693 7 126396032 to 126396985 953 CpG island CpG island 19693
Tssr74653 7 126396715 to 126396762 47 - TSS region transcription start site region 74653
Tssr69020 7 126408449 to 126408452 3 + TSS region transcription start site region 69020
Cd19 7 126408450 to 126414889 6439 - protein coding gene CD19 antigen
Tssr74654 7 126412206 to 126412229 23 - TSS region transcription start site region 74654
Tssr74655 7 126414792 to 126414801 9 - TSS region transcription start site region 74655
Tssr74656 7 126414833 to 126414844 11 - TSS region transcription start site region 74656
Tssr74657 7 126414849 to 126414854 5 - TSS region transcription start site region 74657
Tssr74658 7 126414855 to 126414895 40 - TSS region transcription start site region 74658
Tssr74659 7 126414899 to 126414922 23 - TSS region transcription start site region 74659
Tssr74660 7 126416703 to 126416725 22 - TSS region transcription start site region 74660
Rabep2 7 126428425 to 126445907 17482 + protein coding gene rabaptin, RAB GTPase binding effector protein 2
Cpgi19694 7 126428556 to 126429818 1262 CpG island CpG island 19694
Tssr74661 7 126428985 to 126428998 13 - TSS region transcription start site region 74661
Tssr69021 7 126429055 to 126429120 65 + TSS region transcription start site region 69021
Tssr74662 7 126429269 to 126429310 41 - TSS region transcription start site region 74662
Atp2a1 7 126445860 to 126463103 17243 - protein coding gene ATPase, Ca++ transporting, cardiac muscle, fast twitch 1
Tssr74663 7 126446019 to 126446054 35 - TSS region transcription start site region 74663
Tssr69022 7 126446049 to 126446058 9 + TSS region transcription start site region 69022
Tssr74664 7 126446581 to 126446588 7 - TSS region transcription start site region 74664
Tssr74665 7 126446906 to 126446914 8 - TSS region transcription start site region 74665
Tssr74666 7 126446936 to 126446973 37 - TSS region transcription start site region 74666
Tssr74667 7 126446997 to 126447001 4 - TSS region transcription start site region 74667
Tssr74668 7 126447166 to 126447204 38 - TSS region transcription start site region 74668
Tssr74669 7 126447205 to 126447218 13 - TSS region transcription start site region 74669
Tssr74670 7 126447441 to 126447474 33 - TSS region transcription start site region 74670
Tssr74671 7 126447484 to 126447495 11 - TSS region transcription start site region 74671
Tssr74672 7 126447497 to 126447512 15 - TSS region transcription start site region 74672
Tssr2394 7 126447638 to 126447640 2 - TSS region transcription start site region 2394
Tssr74673 7 126447642 to 126447651 9 - TSS region transcription start site region 74673
Tssr74674 7 126447671 to 126447679 8 - TSS region transcription start site region 74674
Tssr74675 7 126447680 to 126447693 13 - TSS region transcription start site region 74675
Tssr74676 7 126447895 to 126447902 7 - TSS region transcription start site region 74676
Tssr69023 7 126447905 to 126447914 9 + TSS region transcription start site region 69023
Tssr74677 7 126447920 to 126447945 25 - TSS region transcription start site region 74677
Tssr74678 7 126447952 to 126447966 14 - TSS region transcription start site region 74678
Tssr74679 7 126447976 to 126447986 10 - TSS region transcription start site region 74679
Tssr74680 7 126447994 to 126448004 10 - TSS region transcription start site region 74680
Tssr74681 7 126448021 to 126448030 9 - TSS region transcription start site region 74681
Tssr74682 7 126448035 to 126448041 6 - TSS region transcription start site region 74682
Tssr74683 7 126448233 to 126448244 11 - TSS region transcription start site region 74683
Tssr74684 7 126448336 to 126448346 10 - TSS region transcription start site region 74684
Tssr74685 7 126448362 to 126448382 20 - TSS region transcription start site region 74685
Tssr74686 7 126448594 to 126448638 44 - TSS region transcription start site region 74686
Tssr74687 7 126448648 to 126448674 26 - TSS region transcription start site region 74687
Tssr74688 7 126448752 to 126448759 7 - TSS region transcription start site region 74688
Tssr74689 7 126448821 to 126448830 9 - TSS region transcription start site region 74689
Tssr74690 7 126449242 to 126449246 4 - TSS region transcription start site region 74690
Tssr74691 7 126449285 to 126449306 21 - TSS region transcription start site region 74691
Tssr74692 7 126450152 to 126450176 24 - TSS region transcription start site region 74692
Tssr74693 7 126450178 to 126450190 12 - TSS region transcription start site region 74693
Tssr74694 7 126450301 to 126450310 9 - TSS region transcription start site region 74694
Tssr74695 7 126450502 to 126450510 8 - TSS region transcription start site region 74695
Tssr74696 7 126453068 to 126453098 30 - TSS region transcription start site region 74696
Tssr74697 7 126453395 to 126453426 31 - TSS region transcription start site region 74697
Tssr74698 7 126456531 to 126456546 15 - TSS region transcription start site region 74698
Tssr74699 7 126456769 to 126456778 9 - TSS region transcription start site region 74699
Tssr74700 7 126456785 to 126456796 11 - TSS region transcription start site region 74700
Tssr74701 7 126456989 to 126457000 11 - TSS region transcription start site region 74701
Tssr69024 7 126457121 to 126457149 28 + TSS region transcription start site region 69024
Tssr74702 7 126457152 to 126457170 18 - TSS region transcription start site region 74702
Tssr74703 7 126457175 to 126457198 23 - TSS region transcription start site region 74703
Tssr74704 7 126457975 to 126457993 18 - TSS region transcription start site region 74704
Tssr2395 7 126458606 to 126458647 41 - TSS region transcription start site region 2395
Tssr74705 7 126458891 to 126458902 11 - TSS region transcription start site region 74705
Tssr74706 7 126458923 to 126458932 9 - TSS region transcription start site region 74706
Tssr69025 7 126459646 to 126459689 43 + TSS region transcription start site region 69025
Tssr74707 7 126459717 to 126459729 12 - TSS region transcription start site region 74707
Tssr74708 7 126459742 to 126459749 7 - TSS region transcription start site region 74708
Tssr74709 7 126460772 to 126460783 11 - TSS region transcription start site region 74709
Tssr74710 7 126460916 to 126460927 11 - TSS region transcription start site region 74710
Tssr74711 7 126461665 to 126461676 11 - TSS region transcription start site region 74711
Tssr74712 7 126461687 to 126461709 22 - TSS region transcription start site region 74712
Tssr74713 7 126462156 to 126462175 19 - TSS region transcription start site region 74713
Tssr74714 7 126463100 to 126463115 15 - TSS region transcription start site region 74714
Tssr74715 7 126463297 to 126463307 10 - TSS region transcription start site region 74715
Sh2b1 7 126466993 to 126475265 8272 - protein coding gene SH2B adaptor protein 1
Tssr74716 7 126470192 to 126470216 24 - TSS region transcription start site region 74716
Tssr69026 7 126470385 to 126470396 11 + TSS region transcription start site region 69026
Tssr74717 7 126471444 to 126471489 45 - TSS region transcription start site region 74717
Tssr74718 7 126472383 to 126472395 12 - TSS region transcription start site region 74718
Tssr74719 7 126472414 to 126472437 23 - TSS region transcription start site region 74719
Cpgi19695 7 126472726 to 126472886 160 CpG island CpG island 19695
Cpgi19696 7 126474480 to 126475683 1203 CpG island CpG island 19696
Tssr74720 7 126474934 to 126474979 45 - TSS region transcription start site region 74720
Tssr74721 7 126475055 to 126475079 24 - TSS region transcription start site region 74721
Tssr74722 7 126475082 to 126475120 38 - TSS region transcription start site region 74722
C530001K22Rik 7 126475194 to 126476251 1057 unclassified non-coding RNA gene RIKEN cDNA C530001K22 gene
Cpgi19697 7 126482461 to 126482616 155 CpG island CpG island 19697
Gm46001 7 126484340 to 126486514 2174 - lncRNA gene predicted gene, 46001
Cpgi19698 7 126487110 to 126487911 801 CpG island CpG island 19698
Tssr69027 7 126487255 to 126487266 11 + TSS region transcription start site region 69027
Tssr69028 7 126487344 to 126487390 46 + TSS region transcription start site region 69028
Tufm 7 126487361 to 126490731 3370 + protein coding gene Tu translation elongation factor, mitochondrial
Atxn2l 7 126491708 to 126503437 11729 - protein coding gene ataxin 2-like
Tssr74723 7 126492298 to 126492318 20 - TSS region transcription start site region 74723
Tssr74724 7 126494200 to 126494274 74 - TSS region transcription start site region 74724
Tssr74725 7 126494320 to 126494341 21 - TSS region transcription start site region 74725
Tssr74726 7 126495430 to 126495478 48 - TSS region transcription start site region 74726
Tssr74727 7 126496460 to 126496493 33 - TSS region transcription start site region 74727
Cpgi19699 7 126501754 to 126503886 2132 CpG island CpG island 19699
Tssr74728 7 126501952 to 126501960 8 - TSS region transcription start site region 74728
Tssr74729 7 126501980 to 126502049 69 - TSS region transcription start site region 74729
Tssr74730 7 126502094 to 126502109 15 - TSS region transcription start site region 74730
Tssr74731 7 126502312 to 126502351 39 - TSS region transcription start site region 74731
4930456A14Rik 7 126502347 to 126532013 29666 + lncRNA gene RIKEN cDNA 4930456A14 gene
Tssr74732 7 126502356 to 126502376 20 - TSS region transcription start site region 74732
Tssr74733 7 126502380 to 126502419 39 - TSS region transcription start site region 74733
Tssr69029 7 126502625 to 126502655 30 + TSS region transcription start site region 69029
Tssr74734 7 126503267 to 126503284 17 - TSS region transcription start site region 74734
Tssr74735 7 126503298 to 126503405 107 - TSS region transcription start site region 74735
Tssr74736 7 126503408 to 126503477 69 - TSS region transcription start site region 74736
Tssr74737 7 126503583 to 126503594 11 - TSS region transcription start site region 74737
Tssr74738 7 126503603 to 126503613 10 - TSS region transcription start site region 74738
Tssr74739 7 126503638 to 126503643 5 - TSS region transcription start site region 74739
Tssr74740 7 126503658 to 126503677 19 - TSS region transcription start site region 74740
Cpgi19700 7 126535807 to 126536279 472 CpG island CpG island 19700
Eif3c 7 126546911 to 126566366 19455 - protein coding gene eukaryotic translation initiation factor 3, subunit C
Tssr69030 7 126558922 to 126558982 60 + TSS region transcription start site region 69030
Tssr74741 7 126562639 to 126562660 21 - TSS region transcription start site region 74741
Tssr74742 7 126563067 to 126563099 32 - TSS region transcription start site region 74742
Tssr74743 7 126563268 to 126563309 41 - TSS region transcription start site region 74743
Tssr69031 7 126563680 to 126563726 46 + TSS region transcription start site region 69031
Tssr74744 7 126563685 to 126563711 26 - TSS region transcription start site region 74744
Gm24596 7 126563874 to 126563980 106 - snRNA gene predicted gene, 24596
Tssr74745 7 126564458 to 126564484 26 - TSS region transcription start site region 74745
Tssr74746 7 126564498 to 126564540 42 - TSS region transcription start site region 74746
Tssr74747 7 126564587 to 126564612 25 - TSS region transcription start site region 74747
Tssr74748 7 126564733 to 126564753 20 - TSS region transcription start site region 74748
Tssr74749 7 126564761 to 126564779 18 - TSS region transcription start site region 74749
Cpgi19701 7 126565709 to 126566521 812 CpG island CpG island 19701
G730046D07Rik 7 126565919 to 126566858 939 protein coding gene RIKEN cDNA G730046D07 gene
Tssr74750 7 126566107 to 126566127 20 - TSS region transcription start site region 74750
Tssr74751 7 126566180 to 126566209 29 - TSS region transcription start site region 74751
Tssr74752 7 126566349 to 126566354 5 - TSS region transcription start site region 74752
Tssr74753 7 126566364 to 126566416 52 - TSS region transcription start site region 74753
Gm25579 7 126567044 to 126567149 105 - snRNA gene predicted gene, 25579
Cln3 7 126571400 to 126585817 14417 - protein coding gene ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
Tssr74754 7 126579223 to 126579237 14 - TSS region transcription start site region 74754
Mir7059 7 126579474 to 126579532 58 - miRNA gene microRNA 7059
Tssr74755 7 126581763 to 126581776 13 - TSS region transcription start site region 74755
Cpgi19702 7 126582869 to 126583598 729 CpG island CpG island 19702
Tssr74756 7 126583177 to 126583255 78 - TSS region transcription start site region 74756
Tssr74757 7 126583327 to 126583371 44 - TSS region transcription start site region 74757
Tssr74758 7 126583547 to 126583578 31 - TSS region transcription start site region 74758
Tssr74759 7 126584384 to 126584397 13 - TSS region transcription start site region 74759
Tssr74760 7 126584412 to 126584433 21 - TSS region transcription start site region 74760
Tssr74761 7 126584544 to 126584609 65 - TSS region transcription start site region 74761
Tssr74762 7 126584616 to 126584627 11 - TSS region transcription start site region 74762
Tssr74763 7 126584635 to 126584648 13 - TSS region transcription start site region 74763
Tssr74764 7 126584798 to 126584817 19 - TSS region transcription start site region 74764
Tssr74765 7 126584822 to 126584833 11 - TSS region transcription start site region 74765
Tssr74766 7 126584863 to 126584889 26 - TSS region transcription start site region 74766
Tssr69032 7 126584937 to 126584947 10 + TSS region transcription start site region 69032
Apobr 7 126584942 to 126589112 4170 + protein coding gene apolipoprotein B receptor
Tssr69033 7 126584948 to 126584953 5 + TSS region transcription start site region 69033
Tssr69034 7 126584968 to 126584988 20 + TSS region transcription start site region 69034
Tssr74767 7 126585528 to 126585591 63 - TSS region transcription start site region 74767
Tssr69035 7 126585533 to 126585549 16 + TSS region transcription start site region 69035
Tssr69036 7 126585603 to 126585621 18 + TSS region transcription start site region 69036
Tssr74768 7 126585775 to 126585840 65 - TSS region transcription start site region 74768
Tssr69037 7 126585876 to 126585887 11 + TSS region transcription start site region 69037
Tssr69038 7 126585910 to 126585924 14 + TSS region transcription start site region 69038
Tssr69039 7 126585929 to 126585943 14 + TSS region transcription start site region 69039
Tssr69040 7 126586154 to 126586168 14 + TSS region transcription start site region 69040
Tssr74769 7 126587533 to 126587537 4 - TSS region transcription start site region 74769
Tssr74770 7 126587559 to 126587571 12 - TSS region transcription start site region 74770