Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:125876715-126425501

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102 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gsg1l 7 125878420 to 126082411 203991 - protein coding gene GSG1-like
D7Sri317 7 125920909 to 125921017 108 DNA segment DNA segment, Chr 7, The Scripps Research Institute 317
Lgth10 7 126000000 to 52000000 -74000000 QTL body length 10
Cpgi19685 7 126041159 to 126041341 182 CpG island CpG island 19685
Gm44874 7 126062906 to 126064447 1541 - unclassified gene predicted gene 44874
Cpgi19686 7 126081275 to 126083033 1758 CpG island CpG island 19686
Tssr74611 7 126082083 to 126082098 15 - TSS region transcription start site region 74611
Tssr74612 7 126082378 to 126082392 14 - TSS region transcription start site region 74612
Tssr74613 7 126082406 to 126082428 22 - TSS region transcription start site region 74613
Tssr74614 7 126082474 to 126082485 11 - TSS region transcription start site region 74614
Gm30807 7 126091952 to 126094714 2762 - lncRNA gene predicted gene, 30807
Xpo6 7 126101715 to 126200501 98786 - protein coding gene exportin 6
Tssr74615 7 126108504 to 126108524 20 - TSS region transcription start site region 74615
Tssr74616 7 126112021 to 126112025 4 - TSS region transcription start site region 74616
Tssr74617 7 126160992 to 126161013 21 - TSS region transcription start site region 74617
Gm17137 7 126165647 to 126166613 966 + pseudogene predicted gene 17137
Gm17136 7 126176124 to 126176534 410 + pseudogene predicted gene 17136
Tssr74618 7 126181615 to 126181632 17 - TSS region transcription start site region 74618
Tssr74619 7 126197996 to 126198008 12 - TSS region transcription start site region 74619
Cpgi19687 7 126199692 to 126200683 991 CpG island CpG island 19687
Tssr74620 7 126200119 to 126200168 49 - TSS region transcription start site region 74620
Tssr74621 7 126200305 to 126200313 8 - TSS region transcription start site region 74621
Tssr74622 7 126200329 to 126200335 6 - TSS region transcription start site region 74622
Tssr74623 7 126200345 to 126200354 9 - TSS region transcription start site region 74623
Tssr74624 7 126200357 to 126200366 9 - TSS region transcription start site region 74624
Tssr74625 7 126200397 to 126200408 11 - TSS region transcription start site region 74625
Tssr74626 7 126200415 to 126200468 53 - TSS region transcription start site region 74626
Tssr74627 7 126200474 to 126200500 26 - TSS region transcription start site region 74627
Tssr74628 7 126200509 to 126200525 16 - TSS region transcription start site region 74628
Gm19138 7 126214885 to 126215556 671 - pseudogene predicted gene, 19138
1700123J17Rik 7 126224247 to 126248238 23991 - lincRNA gene RIKEN cDNA 1700123J17 gene
Gm44703 7 126242380 to 126242627 247 - pseudogene predicted gene 44703
Tssr69000 7 126248342 to 126248358 16 + TSS region transcription start site region 69000
Tssr69001 7 126248364 to 126248375 11 + TSS region transcription start site region 69001
Cpgi19688 7 126248700 to 126248873 173 CpG island CpG island 19688
Cpgi19689 7 126271717 to 126273324 1607 CpG island CpG island 19689
Tssr69002 7 126272413 to 126272424 11 + TSS region transcription start site region 69002
Tssr69003 7 126272428 to 126272443 15 + TSS region transcription start site region 69003
Tssr69004 7 126272444 to 126272455 11 + TSS region transcription start site region 69004
Tssr69005 7 126272463 to 126272474 11 + TSS region transcription start site region 69005
Tssr69006 7 126272475 to 126272492 17 + TSS region transcription start site region 69006
Tssr69007 7 126272506 to 126272524 18 + TSS region transcription start site region 69007
Tssr69008 7 126272526 to 126272587 61 + TSS region transcription start site region 69008
Tssr69009 7 126272589 to 126272609 20 + TSS region transcription start site region 69009
Sbk1 7 126272619 to 126295016 22397 + protein coding gene SH3-binding kinase 1
Tssr69010 7 126272784 to 126272795 11 + TSS region transcription start site region 69010
Tssr69011 7 126272847 to 126272858 11 + TSS region transcription start site region 69011
Tssr74629 7 126285407 to 126285418 11 - TSS region transcription start site region 74629
Cpgi19690 7 126291675 to 126292733 1058 CpG island CpG island 19690
Tssr69012 7 126292473 to 126292488 15 + TSS region transcription start site region 69012
Tssr69013 7 126293407 to 126293413 6 + TSS region transcription start site region 69013
Tssr69014 7 126293817 to 126293831 14 + TSS region transcription start site region 69014
Tssr69015 7 126293991 to 126294001 10 + TSS region transcription start site region 69015
Gm10155 7 126299434 to 126299916 482 - pseudogene predicted gene 10155
Tssr69016 7 126323953 to 126323992 39 + TSS region transcription start site region 69016
Tssr74630 7 126324918 to 126324932 14 - TSS region transcription start site region 74630
D7Csu4 7 126324922 to 126325409 487 DNA segment DNA segment, Chr 7, Central Connecticut State University 4
D7Csu3 7 126325352 to 126325792 440 DNA segment DNA segment, Chr 7, Central Connecticut State University 3
Tssr74631 7 126327207 to 126327232 25 - TSS region transcription start site region 74631
Gm30928 7 126348372 to 126351619 3247 - lincRNA gene predicted gene, 30928
Tssr74632 7 126351549 to 126351560 11 - TSS region transcription start site region 74632
Tssr74633 7 126351566 to 126351575 9 - TSS region transcription start site region 74633
Tssr74634 7 126351596 to 126351611 15 - TSS region transcription start site region 74634
Tssr69017 7 126353555 to 126353557 2 + TSS region transcription start site region 69017
Tssr74635 7 126355952 to 126355971 19 - TSS region transcription start site region 74635
Lat 7 126363824 to 126369570 5746 - protein coding gene linker for activation of T cells
Tssr74636 7 126364844 to 126364850 6 - TSS region transcription start site region 74636
Tssr74637 7 126364875 to 126364880 5 - TSS region transcription start site region 74637
Tssr74638 7 126364894 to 126364905 11 - TSS region transcription start site region 74638
Tssr74639 7 126364909 to 126364922 13 - TSS region transcription start site region 74639
Tssr74640 7 126364929 to 126364951 22 - TSS region transcription start site region 74640
Tssr69018 7 126367885 to 126367925 40 + TSS region transcription start site region 69018
Mir7058 7 126367971 to 126368045 74 - miRNA gene microRNA 7058
Tssr74641 7 126368529 to 126368546 17 - TSS region transcription start site region 74641
Tssr74642 7 126368568 to 126368588 20 - TSS region transcription start site region 74642
Cpgi19691 7 126369121 to 126369520 399 CpG island CpG island 19691
Tssr74643 7 126369400 to 126369411 11 - TSS region transcription start site region 74643
Tssr74644 7 126369421 to 126369422 1 - TSS region transcription start site region 74644
Tssr74645 7 126369423 to 126369435 12 - TSS region transcription start site region 74645
Tssr74646 7 126369440 to 126369457 17 - TSS region transcription start site region 74646
Tssr74647 7 126369461 to 126369472 11 - TSS region transcription start site region 74647
Tssr74648 7 126369481 to 126369496 15 - TSS region transcription start site region 74648
Tssr74649 7 126369500 to 126369526 26 - TSS region transcription start site region 74649
Tssr74650 7 126369551 to 126369578 27 - TSS region transcription start site region 74650
Spns1 7 126370060 to 126377450 7390 - protein coding gene spinster homolog 1
Cpgi19692 7 126376762 to 126377665 903 CpG island CpG island 19692
Tssr74651 7 126377387 to 126377399 12 - TSS region transcription start site region 74651
Tssr74652 7 126377401 to 126377438 37 - TSS region transcription start site region 74652
Nfatc2ip 7 126382854 to 126396737 13883 - protein coding gene nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein
Tssr69019 7 126395550 to 126395553 3 + TSS region transcription start site region 69019
Gm45141 7 126395858 to 126397745 1887 + unclassified gene predicted gene 45141
Cpgi19693 7 126396032 to 126396985 953 CpG island CpG island 19693
Tssr74653 7 126396715 to 126396762 47 - TSS region transcription start site region 74653
Tssr69020 7 126408449 to 126408452 3 + TSS region transcription start site region 69020
Cd19 7 126408450 to 126414889 6439 - protein coding gene CD19 antigen
Tssr74654 7 126412206 to 126412229 23 - TSS region transcription start site region 74654
Tssr74655 7 126414792 to 126414801 9 - TSS region transcription start site region 74655
Tssr74656 7 126414833 to 126414844 11 - TSS region transcription start site region 74656
Tssr74657 7 126414849 to 126414854 5 - TSS region transcription start site region 74657
Tssr74658 7 126414855 to 126414895 40 - TSS region transcription start site region 74658
Tssr74659 7 126414899 to 126414922 23 - TSS region transcription start site region 74659
Tssr74660 7 126416703 to 126416725 22 - TSS region transcription start site region 74660