Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:125532888-126049793

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tsiq1 7 119885996 to 125542177 5656181 QTL T cell secretion of IL4 QTL 1
D7Mit206 7 125542030 to 125542177 147 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 206
Gm4973 7 125547269 to 125548599 1330 + pseudogene predicted gene 4973
Tssr68977 7 125548371 to 125548398 27 + TSS region transcription start site region 68977
A430106F20Rik 7 125551772 to 125552062 290 unclassified gene RIKEN cDNA A430106F20 gene
Cpgi19682 7 125552009 to 125552544 535 CpG island CpG island 19682
Tssr74604 7 125552055 to 125552065 10 - TSS region transcription start site region 74604
Tssr74605 7 125552133 to 125552176 43 - TSS region transcription start site region 74605
Tssr68978 7 125552235 to 125552257 22 + TSS region transcription start site region 68978
Tssr68979 7 125552260 to 125552306 46 + TSS region transcription start site region 68979
Il4ra 7 125552282 to 125579474 27192 + protein coding gene interleukin 4 receptor, alpha
Tssr68980 7 125552308 to 125552311 3 + TSS region transcription start site region 68980
Tssr68981 7 125552313 to 125552323 10 + TSS region transcription start site region 68981
Gm44876 7 125570776 to 125572117 1341 - antisense lncRNA gene predicted gene 44876
Cpgi19683 7 125581057 to 125581608 551 CpG island CpG island 19683
Tssr68982 7 125581428 to 125581450 22 + TSS region transcription start site region 68982
Tssr68983 7 125594134 to 125594147 13 + TSS region transcription start site region 68983
Tssr68984 7 125603420 to 125603437 17 + TSS region transcription start site region 68984
Il21r 7 125603429 to 125633570 30141 + protein coding gene interleukin 21 receptor
Tssr68985 7 125603443 to 125603474 31 + TSS region transcription start site region 68985
Tssr68986 7 125603481 to 125603496 15 + TSS region transcription start site region 68986
Tssr68987 7 125603587 to 125603600 13 + TSS region transcription start site region 68987
Tssr68988 7 125603616 to 125603625 9 + TSS region transcription start site region 68988
Tssr68989 7 125603640 to 125603651 11 + TSS region transcription start site region 68989
Tssr74606 7 125605809 to 125605835 26 - TSS region transcription start site region 74606
Tssr68990 7 125607626 to 125607669 43 + TSS region transcription start site region 68990
Tssr68991 7 125630613 to 125630627 14 + TSS region transcription start site region 68991
Tssr68992 7 125630646 to 125630660 14 + TSS region transcription start site region 68992
D7Mit101 7 125633039 to 125633127 88 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 101
Tssr68993 7 125634396 to 125634410 14 + TSS region transcription start site region 68993
Tssr74607 7 125636519 to 125636523 4 - TSS region transcription start site region 74607
Gtf3c1 7 125640954 to 125707688 66734 - protein coding gene general transcription factor III C 1
Cpgi19684 7 125707031 to 125708339 1308 CpG island CpG island 19684
Tssr74608 7 125707679 to 125707718 39 - TSS region transcription start site region 74608
Tssr74609 7 125707735 to 125707747 12 - TSS region transcription start site region 74609
Tssr74610 7 125707771 to 125707785 14 - TSS region transcription start site region 74610
D430042O09Rik 7 125707888 to 125874793 166905 + protein coding gene RIKEN cDNA D430042O09 gene
Tssr68994 7 125707893 to 125707929 36 + TSS region transcription start site region 68994
Tssr68995 7 125707945 to 125707958 13 + TSS region transcription start site region 68995
A930012M21Rik 7 125710836 to 125713308 2472 unclassified gene RIKEN cDNA A930012M21 gene
D7Mit286 7 125719677 to 125719847 170 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 286
D7Ertd523e 7 125735725 to 125735974 249 DNA segment DNA segment, Chr 7, ERATO Doi 523, expressed
Tssr68996 7 125753728 to 125753738 10 + TSS region transcription start site region 68996
Tssr68997 7 125829529 to 125829548 19 + TSS region transcription start site region 68997
Tssr68998 7 125829653 to 125829668 15 + TSS region transcription start site region 68998
Tssr68999 7 125872677 to 125872720 43 + TSS region transcription start site region 68999
Gsg1l 7 125878420 to 126082411 203991 - protein coding gene GSG1-like
D7Sri317 7 125920909 to 125921017 108 DNA segment DNA segment, Chr 7, The Scripps Research Institute 317
Lgth10 7 126000000 to 52000000 -74000000 QTL body length 10
Cpgi19685 7 126041159 to 126041341 182 CpG island CpG island 19685