Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:12403196-12804643

35 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vmn1r-ps68	7	12404099 to 12404485	386	-	pseudogene	vomeronasal 1 receptor, pseudogene 68
Zfp551	7	12415153 to 12422751	7598	-	protein coding gene	zinc fingr protein 551
Cpgi18313	7	12422331 to 12422775	444		CpG island	CpG island 18313
Vmn2r-ps53	7	12445358 to 12468852	23494	+	pseudogene	vomeronasal 2, receptor, pseudogene 53
Cpgi18314	7	12478164 to 12478827	663		CpG island	CpG island 18314
Zfp606	7	12478293 to 12496235	17942	+	protein coding gene	zinc finger protein 606
Tssr64471	7	12478294 to 12478313	19	+	TSS region	transcription start site region 64471
Tssr64472	7	12478319 to 12478372	53	+	TSS region	transcription start site region 64472
Tssr64473	7	12479154 to 12479159	5	+	TSS region	transcription start site region 64473
2700057C20Rik	7	12498749 to 12499846	1097		unclassified gene	RIKEN cDNA 2700057C20 gene
Tssr64474	7	12512488 to 12512512	24	+	TSS region	transcription start site region 64474
Tssr64475	7	12512513 to 12512520	7	+	TSS region	transcription start site region 64475
2900092C05Rik	7	12512517 to 12556323	43806	+	protein coding gene	RIKEN cDNA 2900092C05 gene
Tssr64476	7	12512522 to 12512540	18	+	TSS region	transcription start site region 64476
Gm15877	7	12517405 to 12518368	963	+	pseudogene	predicted gene 15877
Gm45475	7	12559860 to 12560168	308	+	pseudogene	predicted gene 45475
Vmn2r53	7	12581470 to 12606544	25074	-	protein coding gene	vomeronasal 2, receptor 53
Gm15773	7	12603196 to 12604643	1447	+	pseudogene	predicted gene 15773
Tssr64477	7	12603573 to 12603600	27	+	TSS region	transcription start site region 64477
Tssr64478	7	12603725 to 12603730	5	+	TSS region	transcription start site region 64478
Vmn2r54	7	12615233 to 12636134	20901	-	protein coding gene	vomeronasal 2, receptor 54
Vmn2r55	7	12651706 to 12684991	33285	-	protein coding gene	vomeronasal 2, receptor 55
Vmn2r56	7	12693860 to 12733320	39460	-	protein coding gene	vomeronasal 2, receptor 56
Gm6946	7	12742686 to 12743672	986	+	pseudogene	predicted gene 6946
Gm18205	7	12760708 to 12761548	840	+	pseudogene	predicted gene, 18205
Zscan18	7	12768090 to 12803635	35545	-	protein coding gene	zinc finger and SCAN domain containing 18
Cpgi18315	7	12779893 to 12781118	1225		CpG island	CpG island 18315
Tssr70621	7	12780607 to 12780679	72	-	TSS region	transcription start site region 70621
1700047O18Rik	7	12780860 to 12781602	742	+	unclassified gene	RIKEN cDNA 1700047O18 gene
Gm4247	7	12793828 to 12794869	1041	-	pseudogene	predicted gene 4247
Gm18194	7	12796855 to 12797491	636	-	pseudogene	predicted gene, 18194
Gm45315	7	12797529 to 12797861	332	+	pseudogene	predicted gene 45315
Cpgi18316	7	12803219 to 12803956	737		CpG island	CpG island 18316
A930003G23Rik	7	12803545 to 12804778	1233		unclassified gene	RIKEN cDNA A930003G23 gene
Tssr70622	7	12803607 to 12803644	37	-	TSS region	transcription start site region 70622