MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:123412350-123512368

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lcmt1	7	123377982 to 123430358	52376	+	protein coding gene	leucine carboxyl methyltransferase 1
Tssr68947	7	123418206 to 123418228	22	+	TSS region	transcription start site region 68947
Tssr68948	7	123418234 to 123418250	16	+	TSS region	transcription start site region 68948
Tssr68949	7	123418255 to 123418276	21	+	TSS region	transcription start site region 68949
Tssr68950	7	123418281 to 123418291	10	+	TSS region	transcription start site region 68950
Tssr68951	7	123421510 to 123421521	11	+	TSS region	transcription start site region 68951
Tssr68952	7	123422369 to 123422374	5	+	TSS region	transcription start site region 68952
D7Mit164	7	123435509 to 123435813	304		DNA segment	DNA segment, Chr 7, Massachusetts Institute of Technology 164
D7Mit41	7	123436140 to 123436252	112		DNA segment	DNA segment, Chr 7, Massachusetts Institute of Technology 41
Tssr68953	7	123462274 to 123462296	22	+	TSS region	transcription start site region 68953
Aqp8	7	123462294 to 123468003	5709	+	protein coding gene	aquaporin 8
Tssr68954	7	123462318 to 123462329	11	+	TSS region	transcription start site region 68954
Tssr68955	7	123462350 to 123462368	18	+	TSS region	transcription start site region 68955
Zkscan2	7	123475384 to 123500449	25065	-	protein coding gene	zinc finger with KRAB and SCAN domains 2
Cpgi19677	7	123499978 to 123501091	1113		CpG island	CpG island 19677
Tssr74587	7	123500100 to 123500115	15	-	TSS region	transcription start site region 74587
Tssr74588	7	123500503 to 123500578	75	-	TSS region	transcription start site region 74588