Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:123382022-123849762

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lcmt1 7 123377982 to 123430358 52376 + protein coding gene leucine carboxyl methyltransferase 1
Gm23559 7 123382669 to 123382771 102 - snRNA gene predicted gene, 23559
Tssr68947 7 123418206 to 123418228 22 + TSS region transcription start site region 68947
Tssr68948 7 123418234 to 123418250 16 + TSS region transcription start site region 68948
Tssr68949 7 123418255 to 123418276 21 + TSS region transcription start site region 68949
Tssr68950 7 123418281 to 123418291 10 + TSS region transcription start site region 68950
Tssr68951 7 123421510 to 123421521 11 + TSS region transcription start site region 68951
Tssr68952 7 123422369 to 123422374 5 + TSS region transcription start site region 68952
D7Mit164 7 123435509 to 123435813 304 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 164
D7Mit41 7 123436140 to 123436252 112 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 41
Tssr68953 7 123462274 to 123462296 22 + TSS region transcription start site region 68953
Aqp8 7 123462294 to 123468003 5709 + protein coding gene aquaporin 8
Tssr68954 7 123462318 to 123462329 11 + TSS region transcription start site region 68954
Tssr68955 7 123462350 to 123462368 18 + TSS region transcription start site region 68955
Zkscan2 7 123475384 to 123500449 25065 - protein coding gene zinc finger with KRAB and SCAN domains 2
Cpgi19677 7 123499978 to 123501091 1113 CpG island CpG island 19677
Tssr74587 7 123500100 to 123500115 15 - TSS region transcription start site region 74587
Tssr74588 7 123500503 to 123500578 75 - TSS region transcription start site region 74588
Tssr2393 7 123543491 to 123543495 4 + TSS region transcription start site region 2393
Gm30335 7 123592022 to 123639762 47740 + lncRNA gene predicted gene, 30335
Tssr68956 7 123819945 to 123819947 2 + TSS region transcription start site region 68956