Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:12334860-12785168

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23521 7 12358898 to 12359007 109 - miRNA gene predicted gene, 23521
Vmn1r84 7 12361808 to 12362764 956 - protein coding gene vomeronasal 1 receptor 84
Vmn1r-ps66 7 12392272 to 12392883 611 - pseudogene vomeronasal 1 receptor, pseudogene 66
Vmn1r-ps67 7 12399048 to 12399726 678 - pseudogene vomeronasal 1 receptor, pseudogene 67
Vmn1r-ps68 7 12404099 to 12404485 386 - pseudogene vomeronasal 1 receptor, pseudogene 68
Zfp551 7 12415153 to 12422751 7598 - protein coding gene zinc fingr protein 551
Cpgi18313 7 12422331 to 12422775 444 CpG island CpG island 18313
Vmn2r-ps53 7 12445358 to 12468852 23494 + pseudogene vomeronasal 2, receptor, pseudogene 53
Cpgi18314 7 12478164 to 12478827 663 CpG island CpG island 18314
Zfp606 7 12478293 to 12496235 17942 + protein coding gene zinc finger protein 606
Tssr64471 7 12478294 to 12478313 19 + TSS region transcription start site region 64471
Tssr64472 7 12478319 to 12478372 53 + TSS region transcription start site region 64472
Tssr64473 7 12479154 to 12479159 5 + TSS region transcription start site region 64473
2700057C20Rik 7 12498749 to 12499846 1097 unclassified gene RIKEN cDNA 2700057C20 gene
Tssr64474 7 12512488 to 12512512 24 + TSS region transcription start site region 64474
Tssr64475 7 12512513 to 12512520 7 + TSS region transcription start site region 64475
2900092C05Rik 7 12512517 to 12556323 43806 + protein coding gene RIKEN cDNA 2900092C05 gene
Tssr64476 7 12512522 to 12512540 18 + TSS region transcription start site region 64476
Gm15877 7 12517405 to 12518368 963 + pseudogene predicted gene 15877
Gm45475 7 12559860 to 12560168 308 + pseudogene predicted gene 45475
Vmn2r53 7 12581470 to 12606544 25074 - protein coding gene vomeronasal 2, receptor 53
Gm15773 7 12603196 to 12604643 1447 + pseudogene predicted gene 15773
Tssr64477 7 12603573 to 12603600 27 + TSS region transcription start site region 64477
Tssr64478 7 12603725 to 12603730 5 + TSS region transcription start site region 64478
Vmn2r54 7 12615233 to 12636134 20901 - protein coding gene vomeronasal 2, receptor 54
Vmn2r55 7 12651706 to 12684991 33285 - protein coding gene vomeronasal 2, receptor 55
Vmn2r56 7 12693860 to 12733320 39460 - protein coding gene vomeronasal 2, receptor 56
Gm6946 7 12742686 to 12743672 986 + pseudogene predicted gene 6946
Gm18205 7 12760708 to 12761548 840 + pseudogene predicted gene, 18205
Zscan18 7 12768090 to 12803635 35545 - protein coding gene zinc finger and SCAN domain containing 18
Cpgi18315 7 12779893 to 12781118 1225 CpG island CpG island 18315
Tssr70621 7 12780607 to 12780679 72 - TSS region transcription start site region 70621
1700047O18Rik 7 12780860 to 12781602 742 + unclassified gene RIKEN cDNA 1700047O18 gene