Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:123171683-123401727

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnrc6a 7 123123885 to 123195296 71411 + protein coding gene trinucleotide repeat containing 6a
Tssr68938 7 123214776 to 123214793 17 + TSS region transcription start site region 68938
Slc5a11 7 123214780 to 123273253 58473 + protein coding gene solute carrier family 5 (sodium/glucose cotransporter), member 11
Tssr68939 7 123214808 to 123214853 45 + TSS region transcription start site region 68939
Tssr68940 7 123214860 to 123214886 26 + TSS region transcription start site region 68940
Tssr68941 7 123228879 to 123228885 6 + TSS region transcription start site region 68941
Arhgap17 7 123279218 to 123369915 90697 - protein coding gene Rho GTPase activating protein 17
Tssr74576 7 123286683 to 123286727 44 - TSS region transcription start site region 74576
Tssr74577 7 123286894 to 123286911 17 - TSS region transcription start site region 74577
Tssr74578 7 123286967 to 123287018 51 - TSS region transcription start site region 74578
D7Ertd388e 7 123290296 to 123290503 207 DNA segment DNA segment, Chr 7, ERATO Doi 388, expressed
Tssr74579 7 123294519 to 123294539 20 - TSS region transcription start site region 74579
Tssr74580 7 123300515 to 123300523 8 - TSS region transcription start site region 74580
Tssr74581 7 123312476 to 123312500 24 - TSS region transcription start site region 74581
Tssr74582 7 123329469 to 123329495 26 - TSS region transcription start site region 74582
Tssr74583 7 123358545 to 123358569 24 - TSS region transcription start site region 74583
Tssr74584 7 123359013 to 123359018 5 - TSS region transcription start site region 74584
Cpgi19675 7 123369256 to 123370688 1432 CpG island CpG island 19675
Tssr68942 7 123369745 to 123369750 5 + TSS region transcription start site region 68942
Tssr68943 7 123369764 to 123369769 5 + TSS region transcription start site region 68943
Tssr68944 7 123369781 to 123369802 21 + TSS region transcription start site region 68944
Tssr74585 7 123369842 to 123369867 25 - TSS region transcription start site region 74585
Tssr74586 7 123369870 to 123369920 50 - TSS region transcription start site region 74586
Tssr68945 7 123370302 to 123370321 19 + TSS region transcription start site region 68945
Cpgi19676 7 123377842 to 123378446 604 CpG island CpG island 19676
Lcmt1 7 123377982 to 123430358 52376 + protein coding gene leucine carboxyl methyltransferase 1
Tssr68946 7 123378005 to 123378086 81 + TSS region transcription start site region 68946
Gm23559 7 123382669 to 123382771 102 - snRNA gene predicted gene, 23559