Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:122660564-123312572

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi19670 7 122670611 to 122671560 949 CpG island CpG island 19670
Tssr68902 7 122670800 to 122670827 27 + TSS region transcription start site region 68902
Tssr68903 7 122671123 to 122671130 7 + TSS region transcription start site region 68903
Tssr68904 7 122671144 to 122671158 14 + TSS region transcription start site region 68904
Tssr68905 7 122671187 to 122671198 11 + TSS region transcription start site region 68905
Tssr68906 7 122671202 to 122671207 5 + TSS region transcription start site region 68906
Tssr68907 7 122671208 to 122671218 10 + TSS region transcription start site region 68907
Tssr68908 7 122671317 to 122671324 7 + TSS region transcription start site region 68908
Tssr68909 7 122671334 to 122671363 29 + TSS region transcription start site region 68909
Tssr68910 7 122671378 to 122671396 18 + TSS region transcription start site region 68910
Tssr68911 7 122671401 to 122671417 16 + TSS region transcription start site region 68911
Tssr68912 7 122671468 to 122671482 14 + TSS region transcription start site region 68912
Cacng3 7 122671744 to 122769393 97649 + protein coding gene calcium channel, voltage-dependent, gamma subunit 3
Gm44749 7 122700291 to 122701918 1627 - unclassified gene predicted gene 44749
D7Mit331 7 122736370 to 122736519 149 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 331
Asrq7a 7 122750785 to 122750785 0 QTL acoustic startle response 7a
D7Mit358 7 122753625 to 122753716 91 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 358
Tssr68913 7 122821598 to 122821637 39 + TSS region transcription start site region 68913
Gm29759 7 122837963 to 122838289 326 + pseudogene predicted gene, 29759
Gm39082 7 122924515 to 122935787 11272 + lncRNA gene predicted gene, 39082
Gm39083 7 122935836 to 122940358 4522 + lncRNA gene predicted gene, 39083
Tssr74575 7 122955674 to 122955699 25 - TSS region transcription start site region 74575
Tssr68914 7 122965636 to 122965647 11 + TSS region transcription start site region 68914
4930413G21Rik 7 122969058 to 122970050 992 - lncRNA gene RIKEN cDNA 4930413G21 gene
Cpgi19671 7 122969364 to 122970825 1461 CpG island CpG island 19671
Tssr68915 7 122969847 to 122969858 11 + TSS region transcription start site region 68915
Tssr68916 7 122969874 to 122969885 11 + TSS region transcription start site region 68916
Tssr68917 7 122969887 to 122969907 20 + TSS region transcription start site region 68917
Tssr68918 7 122969911 to 122969966 55 + TSS region transcription start site region 68918
Rbbp6 7 122970564 to 123002572 32008 + protein coding gene retinoblastoma binding protein 6, ubiquitin ligase
Gm20274 7 122995348 to 122995931 583 + sense intronic lncRNA gene predicted gene, 20274
Tssr68919 7 122999767 to 122999781 14 + TSS region transcription start site region 68919
Tssr68920 7 122999837 to 122999858 21 + TSS region transcription start site region 68920
Tssr68921 7 123001589 to 123001618 29 + TSS region transcription start site region 68921
Tssr68922 7 123001634 to 123001651 17 + TSS region transcription start site region 68922
Tssr68923 7 123001656 to 123001678 22 + TSS region transcription start site region 68923
Tssr68924 7 123001792 to 123001808 16 + TSS region transcription start site region 68924
Tssr68925 7 123001872 to 123001930 58 + TSS region transcription start site region 68925
Tssr68926 7 123003643 to 123003650 7 + TSS region transcription start site region 68926
Tssr68927 7 123010090 to 123010107 17 + TSS region transcription start site region 68927
Gm6905 7 123010112 to 123010622 510 + pseudogene predicted gene 6905
Cpgi19672 7 123030751 to 123031012 261 CpG island CpG island 19672
Tssr68928 7 123031264 to 123031284 20 + TSS region transcription start site region 68928
Tssr68929 7 123031346 to 123031392 46 + TSS region transcription start site region 68929
Gm45846 7 123031374 to 123169678 138304 + lincRNA gene predicted gene 45846
Gm45847 7 123031415 to 123068305 36890 + lincRNA gene predicted gene 45847
Tssr68930 7 123057135 to 123057139 4 + TSS region transcription start site region 68930
Gm39084 7 123075587 to 123100717 25130 - lncRNA gene predicted gene, 39084
Cpgi19673 7 123084600 to 123084894 294 CpG island CpG island 19673
Cpgi19674 7 123123744 to 123124920 1176 CpG island CpG island 19674
Tssr68931 7 123123870 to 123123901 31 + TSS region transcription start site region 68931
Tnrc6a 7 123123885 to 123195296 71411 + protein coding gene trinucleotide repeat containing 6a
Tssr68932 7 123124142 to 123124171 29 + TSS region transcription start site region 68932
Tssr68933 7 123124172 to 123124223 51 + TSS region transcription start site region 68933
Tssr68934 7 123124266 to 123124277 11 + TSS region transcription start site region 68934
Tssr68935 7 123124640 to 123124681 41 + TSS region transcription start site region 68935
Tssr68936 7 123143747 to 123143760 13 + TSS region transcription start site region 68936
Tssr68937 7 123158674 to 123158676 2 + TSS region transcription start site region 68937
Tssr68938 7 123214776 to 123214793 17 + TSS region transcription start site region 68938
Slc5a11 7 123214780 to 123273253 58473 + protein coding gene solute carrier family 5 (sodium/glucose cotransporter), member 11
Tssr68939 7 123214808 to 123214853 45 + TSS region transcription start site region 68939
Tssr68940 7 123214860 to 123214886 26 + TSS region transcription start site region 68940
Tssr68941 7 123228879 to 123228885 6 + TSS region transcription start site region 68941
Arhgap17 7 123279218 to 123369915 90697 - protein coding gene Rho GTPase activating protein 17
Tssr74576 7 123286683 to 123286727 44 - TSS region transcription start site region 74576
Tssr74577 7 123286894 to 123286911 17 - TSS region transcription start site region 74577
Tssr74578 7 123286967 to 123287018 51 - TSS region transcription start site region 74578
D7Ertd388e 7 123290296 to 123290503 207 DNA segment DNA segment, Chr 7, ERATO Doi 388, expressed
Tssr74579 7 123294519 to 123294539 20 - TSS region transcription start site region 74579
Tssr74580 7 123300515 to 123300523 8 - TSS region transcription start site region 74580
Tssr74581 7 123312476 to 123312500 24 - TSS region transcription start site region 74581