Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:122167218-122957222

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plk1 7 122159439 to 122169873 10434 + protein coding gene polo like kinase 1
Gm44985 7 122167029 to 122168044 1015 - unclassified gene predicted gene 44985
Ern2 7 122169893 to 122186207 16314 - protein coding gene endoplasmic reticulum (ER) to nucleus signalling 2
Tssr74573 7 122186151 to 122186213 62 - TSS region transcription start site region 74573
Tssr74574 7 122186224 to 122186231 7 - TSS region transcription start site region 74574
Tssr68867 7 122208624 to 122208648 24 + TSS region transcription start site region 68867
Tssr68868 7 122219407 to 122219416 9 + TSS region transcription start site region 68868
Tssr68869 7 122219469 to 122219504 35 + TSS region transcription start site region 68869
Chp2 7 122219496 to 122222824 3328 + protein coding gene calcineurin-like EF hand protein 2
Cpgi19668 7 122219624 to 122219836 212 CpG island CpG island 19668
Tssr68870 7 122219631 to 122219638 7 + TSS region transcription start site region 68870
Tssr68871 7 122219648 to 122219649 1 + TSS region transcription start site region 68871
Tssr68872 7 122219650 to 122219673 23 + TSS region transcription start site region 68872
Tssr68873 7 122219675 to 122219688 13 + TSS region transcription start site region 68873
Tssr68874 7 122219697 to 122219704 7 + TSS region transcription start site region 68874
Gm29903 7 122235265 to 122244231 8966 - lncRNA gene predicted gene, 29903
Gm29977 7 122249302 to 122250025 723 - pseudogene predicted gene, 29977
Gm23614 7 122265094 to 122265200 106 + snRNA gene predicted gene, 23614
Gm30059 7 122267465 to 122273871 6406 + lncRNA gene predicted gene, 30059
Cpgi19669 7 122288612 to 122289970 1358 CpG island CpG island 19669
Tssr68875 7 122288700 to 122288721 21 + TSS region transcription start site region 68875
Tssr68876 7 122288722 to 122288734 12 + TSS region transcription start site region 68876
Tssr68877 7 122288745 to 122288755 10 + TSS region transcription start site region 68877
Tssr68878 7 122289076 to 122289225 149 + TSS region transcription start site region 68878
Prkcb 7 122289125 to 122634402 345277 + protein coding gene protein kinase C, beta
Tssr68879 7 122289310 to 122289347 37 + TSS region transcription start site region 68879
Tssr68880 7 122291315 to 122291323 8 + TSS region transcription start site region 68880
Tssr68881 7 122295751 to 122295755 4 + TSS region transcription start site region 68881
Tssr68882 7 122295784 to 122295789 5 + TSS region transcription start site region 68882
Tssr68883 7 122301267 to 122301278 11 + TSS region transcription start site region 68883
Gm45191 7 122313064 to 122318502 5438 + unclassified gene predicted gene 45191
Tssr68884 7 122337595 to 122337607 12 + TSS region transcription start site region 68884
Gm44664 7 122362000 to 122363785 1785 + unclassified gene predicted gene 44664
Tssr68885 7 122366076 to 122366087 11 + TSS region transcription start site region 68885
Tssr68886 7 122366139 to 122366155 16 + TSS region transcription start site region 68886
Tssr68887 7 122366164 to 122366176 12 + TSS region transcription start site region 68887
Tssr68888 7 122366535 to 122366558 23 + TSS region transcription start site region 68888
Tssr68889 7 122366572 to 122366587 15 + TSS region transcription start site region 68889
Tssr68890 7 122377309 to 122377338 29 + TSS region transcription start site region 68890
Tssr68891 7 122377403 to 122377417 14 + TSS region transcription start site region 68891
Tssr2392 7 122402121 to 122402126 5 - TSS region transcription start site region 2392
Gm44663 7 122402455 to 122405604 3149 + unclassified gene predicted gene 44663
Tssr68892 7 122415714 to 122415720 6 + TSS region transcription start site region 68892
Tssr68893 7 122438650 to 122438652 2 + TSS region transcription start site region 68893
Gm14388 7 122442023 to 122442499 476 + pseudogene predicted gene 14388
Gm26414 7 122446858 to 122447126 268 + unclassified non-coding RNA gene predicted gene, 26414
Gm44745 7 122463438 to 122466160 2722 + unclassified gene predicted gene 44745
Gm14389 7 122484180 to 122484420 240 - pseudogene predicted gene 14389
D7Mit285 7 122486324 to 122486429 105 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 285
Tssr68894 7 122562218 to 122562222 4 + TSS region transcription start site region 68894
Gm44746 7 122590935 to 122592283 1348 + unclassified gene predicted gene 44746
Tssr68895 7 122627618 to 122627623 5 + TSS region transcription start site region 68895
Tssr68896 7 122628440 to 122628448 8 + TSS region transcription start site region 68896
Tssr68897 7 122628813 to 122628825 12 + TSS region transcription start site region 68897
Tssr68898 7 122628898 to 122628905 7 + TSS region transcription start site region 68898
Tssr68899 7 122630857 to 122630891 34 + TSS region transcription start site region 68899
Tssr68900 7 122632302 to 122632307 5 + TSS region transcription start site region 68900
Tssr68901 7 122633143 to 122633190 47 + TSS region transcription start site region 68901
Mobq1 7 122651440 to 122651588 148 QTL multigenic obesity QTL 1
D7Mit8 7 122651440 to 122651588 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 8
Bsbob2 7 122651440 to 129217600 6566160 QTL BSB obesity 2
Tlsm1 7 122651440 to 135569172 12917732 QTL thymic lymphoma susceptible 1
Cpgi19670 7 122670611 to 122671560 949 CpG island CpG island 19670
Tssr68902 7 122670800 to 122670827 27 + TSS region transcription start site region 68902
Tssr68903 7 122671123 to 122671130 7 + TSS region transcription start site region 68903
Tssr68904 7 122671144 to 122671158 14 + TSS region transcription start site region 68904
Tssr68905 7 122671187 to 122671198 11 + TSS region transcription start site region 68905
Tssr68906 7 122671202 to 122671207 5 + TSS region transcription start site region 68906
Tssr68907 7 122671208 to 122671218 10 + TSS region transcription start site region 68907
Tssr68908 7 122671317 to 122671324 7 + TSS region transcription start site region 68908
Tssr68909 7 122671334 to 122671363 29 + TSS region transcription start site region 68909
Tssr68910 7 122671378 to 122671396 18 + TSS region transcription start site region 68910
Tssr68911 7 122671401 to 122671417 16 + TSS region transcription start site region 68911
Tssr68912 7 122671468 to 122671482 14 + TSS region transcription start site region 68912
Cacng3 7 122671744 to 122769393 97649 + protein coding gene calcium channel, voltage-dependent, gamma subunit 3
Gm44749 7 122700291 to 122701918 1627 - unclassified gene predicted gene 44749
D7Mit331 7 122736370 to 122736519 149 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 331
Asrq7a 7 122750785 to 122750785 0 QTL acoustic startle response 7a
D7Mit358 7 122753625 to 122753716 91 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 358
Tssr68913 7 122821598 to 122821637 39 + TSS region transcription start site region 68913
Gm29759 7 122837963 to 122838289 326 + pseudogene predicted gene, 29759
Gm39082 7 122924515 to 122935787 11272 + lncRNA gene predicted gene, 39082
Gm39083 7 122935836 to 122940358 4522 + lncRNA gene predicted gene, 39083
Tssr74575 7 122955674 to 122955699 25 - TSS region transcription start site region 74575