Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:122131317-123211324

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134 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Palb2 7 122107262 to 122132980 25718 - protein coding gene partner and localizer of BRCA2
Gm16326 7 122131092 to 122131505 413 + pseudogene predicted gene 16326
Cpgi19666 7 122132490 to 122133439 949 CpG island CpG island 19666
Tssr68860 7 122132575 to 122132580 5 + TSS region transcription start site region 68860
Tssr74572 7 122132863 to 122132943 80 - TSS region transcription start site region 74572
Tssr68861 7 122133036 to 122133050 14 + TSS region transcription start site region 68861
Dctn5 7 122133041 to 122149044 16003 + protein coding gene dynactin 5
Tssr68862 7 122133052 to 122133090 38 + TSS region transcription start site region 68862
Gm15489 7 122139008 to 122159401 20393 - antisense lncRNA gene predicted gene 15489
Tssr68863 7 122148287 to 122148296 9 + TSS region transcription start site region 68863
Cpgi19667 7 122158911 to 122159972 1061 CpG island CpG island 19667
Tssr68864 7 122159422 to 122159501 79 + TSS region transcription start site region 68864
Plk1 7 122159439 to 122169873 10434 + protein coding gene polo like kinase 1
Tssr68865 7 122162405 to 122162447 42 + TSS region transcription start site region 68865
Tssr68866 7 122164067 to 122164086 19 + TSS region transcription start site region 68866
Gm44985 7 122167029 to 122168044 1015 - unclassified gene predicted gene 44985
Ern2 7 122169893 to 122186207 16314 - protein coding gene endoplasmic reticulum (ER) to nucleus signalling 2
Tssr74573 7 122186151 to 122186213 62 - TSS region transcription start site region 74573
Tssr74574 7 122186224 to 122186231 7 - TSS region transcription start site region 74574
Tssr68867 7 122208624 to 122208648 24 + TSS region transcription start site region 68867
Tssr68868 7 122219407 to 122219416 9 + TSS region transcription start site region 68868
Tssr68869 7 122219469 to 122219504 35 + TSS region transcription start site region 68869
Chp2 7 122219496 to 122222824 3328 + protein coding gene calcineurin-like EF hand protein 2
Cpgi19668 7 122219624 to 122219836 212 CpG island CpG island 19668
Tssr68870 7 122219631 to 122219638 7 + TSS region transcription start site region 68870
Tssr68871 7 122219648 to 122219649 1 + TSS region transcription start site region 68871
Tssr68872 7 122219650 to 122219673 23 + TSS region transcription start site region 68872
Tssr68873 7 122219675 to 122219688 13 + TSS region transcription start site region 68873
Tssr68874 7 122219697 to 122219704 7 + TSS region transcription start site region 68874
Gm29903 7 122235265 to 122244231 8966 - lncRNA gene predicted gene, 29903
Gm29977 7 122249302 to 122250025 723 - pseudogene predicted gene, 29977
Gm23614 7 122265094 to 122265200 106 + snRNA gene predicted gene, 23614
Gm30059 7 122267465 to 122273871 6406 + lncRNA gene predicted gene, 30059
Cpgi19669 7 122288612 to 122289970 1358 CpG island CpG island 19669
Tssr68875 7 122288700 to 122288721 21 + TSS region transcription start site region 68875
Tssr68876 7 122288722 to 122288734 12 + TSS region transcription start site region 68876
Tssr68877 7 122288745 to 122288755 10 + TSS region transcription start site region 68877
Tssr68878 7 122289076 to 122289225 149 + TSS region transcription start site region 68878
Prkcb 7 122289125 to 122634402 345277 + protein coding gene protein kinase C, beta
Tssr68879 7 122289310 to 122289347 37 + TSS region transcription start site region 68879
Tssr68880 7 122291315 to 122291323 8 + TSS region transcription start site region 68880
Tssr68881 7 122295751 to 122295755 4 + TSS region transcription start site region 68881
Tssr68882 7 122295784 to 122295789 5 + TSS region transcription start site region 68882
Tssr68883 7 122301267 to 122301278 11 + TSS region transcription start site region 68883
Gm45191 7 122313064 to 122318502 5438 + unclassified gene predicted gene 45191
Tssr68884 7 122337595 to 122337607 12 + TSS region transcription start site region 68884
Gm44664 7 122362000 to 122363785 1785 + unclassified gene predicted gene 44664
Tssr68885 7 122366076 to 122366087 11 + TSS region transcription start site region 68885
Tssr68886 7 122366139 to 122366155 16 + TSS region transcription start site region 68886
Tssr68887 7 122366164 to 122366176 12 + TSS region transcription start site region 68887
Tssr68888 7 122366535 to 122366558 23 + TSS region transcription start site region 68888
Tssr68889 7 122366572 to 122366587 15 + TSS region transcription start site region 68889
Tssr68890 7 122377309 to 122377338 29 + TSS region transcription start site region 68890
Tssr68891 7 122377403 to 122377417 14 + TSS region transcription start site region 68891
Tssr2392 7 122402121 to 122402126 5 - TSS region transcription start site region 2392
Gm44663 7 122402455 to 122405604 3149 + unclassified gene predicted gene 44663
Tssr68892 7 122415714 to 122415720 6 + TSS region transcription start site region 68892
Tssr68893 7 122438650 to 122438652 2 + TSS region transcription start site region 68893
Gm14388 7 122442023 to 122442499 476 + pseudogene predicted gene 14388
Gm26414 7 122446858 to 122447126 268 + unclassified non-coding RNA gene predicted gene, 26414
Gm44745 7 122463438 to 122466160 2722 + unclassified gene predicted gene 44745
Gm14389 7 122484180 to 122484420 240 - pseudogene predicted gene 14389
D7Mit285 7 122486324 to 122486429 105 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 285
Tssr68894 7 122562218 to 122562222 4 + TSS region transcription start site region 68894
Gm44746 7 122590935 to 122592283 1348 + unclassified gene predicted gene 44746
Tssr68895 7 122627618 to 122627623 5 + TSS region transcription start site region 68895
Tssr68896 7 122628440 to 122628448 8 + TSS region transcription start site region 68896
Tssr68897 7 122628813 to 122628825 12 + TSS region transcription start site region 68897
Tssr68898 7 122628898 to 122628905 7 + TSS region transcription start site region 68898
Tssr68899 7 122630857 to 122630891 34 + TSS region transcription start site region 68899
Tssr68900 7 122632302 to 122632307 5 + TSS region transcription start site region 68900
Tssr68901 7 122633143 to 122633190 47 + TSS region transcription start site region 68901
Tlsm1 7 122651440 to 135569172 12917732 QTL thymic lymphoma susceptible 1
Bsbob2 7 122651440 to 129217600 6566160 QTL BSB obesity 2
D7Mit8 7 122651440 to 122651588 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 8
Mobq1 7 122651440 to 122651588 148 QTL multigenic obesity QTL 1
Cpgi19670 7 122670611 to 122671560 949 CpG island CpG island 19670
Tssr68902 7 122670800 to 122670827 27 + TSS region transcription start site region 68902
Tssr68903 7 122671123 to 122671130 7 + TSS region transcription start site region 68903
Tssr68904 7 122671144 to 122671158 14 + TSS region transcription start site region 68904
Tssr68905 7 122671187 to 122671198 11 + TSS region transcription start site region 68905
Tssr68906 7 122671202 to 122671207 5 + TSS region transcription start site region 68906
Tssr68907 7 122671208 to 122671218 10 + TSS region transcription start site region 68907
Tssr68908 7 122671317 to 122671324 7 + TSS region transcription start site region 68908
Tssr68909 7 122671334 to 122671363 29 + TSS region transcription start site region 68909
Tssr68910 7 122671378 to 122671396 18 + TSS region transcription start site region 68910
Tssr68911 7 122671401 to 122671417 16 + TSS region transcription start site region 68911
Tssr68912 7 122671468 to 122671482 14 + TSS region transcription start site region 68912
Cacng3 7 122671744 to 122769393 97649 + protein coding gene calcium channel, voltage-dependent, gamma subunit 3
Gm44749 7 122700291 to 122701918 1627 - unclassified gene predicted gene 44749
D7Mit331 7 122736370 to 122736519 149 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 331
Asrq7a 7 122750785 to 122750785 0 QTL acoustic startle response 7a
D7Mit358 7 122753625 to 122753716 91 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 358
Tssr68913 7 122821598 to 122821637 39 + TSS region transcription start site region 68913
Gm29759 7 122837963 to 122838289 326 + pseudogene predicted gene, 29759
Gm39082 7 122924515 to 122935787 11272 + lncRNA gene predicted gene, 39082
Gm39083 7 122935836 to 122940358 4522 + lncRNA gene predicted gene, 39083
Tssr74575 7 122955674 to 122955699 25 - TSS region transcription start site region 74575
Tssr68914 7 122965636 to 122965647 11 + TSS region transcription start site region 68914
4930413G21Rik 7 122969058 to 122970050 992 - lncRNA gene RIKEN cDNA 4930413G21 gene
Cpgi19671 7 122969364 to 122970825 1461 CpG island CpG island 19671
Tssr68915 7 122969847 to 122969858 11 + TSS region transcription start site region 68915
Tssr68916 7 122969874 to 122969885 11 + TSS region transcription start site region 68916
Tssr68917 7 122969887 to 122969907 20 + TSS region transcription start site region 68917
Tssr68918 7 122969911 to 122969966 55 + TSS region transcription start site region 68918
Rbbp6 7 122970564 to 123002572 32008 + protein coding gene retinoblastoma binding protein 6, ubiquitin ligase
Gm20274 7 122995348 to 122995931 583 + sense intronic lncRNA gene predicted gene, 20274
Tssr68919 7 122999767 to 122999781 14 + TSS region transcription start site region 68919
Tssr68920 7 122999837 to 122999858 21 + TSS region transcription start site region 68920
Tssr68921 7 123001589 to 123001618 29 + TSS region transcription start site region 68921
Tssr68922 7 123001634 to 123001651 17 + TSS region transcription start site region 68922
Tssr68923 7 123001656 to 123001678 22 + TSS region transcription start site region 68923
Tssr68924 7 123001792 to 123001808 16 + TSS region transcription start site region 68924
Tssr68925 7 123001872 to 123001930 58 + TSS region transcription start site region 68925
Tssr68926 7 123003643 to 123003650 7 + TSS region transcription start site region 68926
Tssr68927 7 123010090 to 123010107 17 + TSS region transcription start site region 68927
Gm6905 7 123010112 to 123010622 510 + pseudogene predicted gene 6905
Cpgi19672 7 123030751 to 123031012 261 CpG island CpG island 19672
Tssr68928 7 123031264 to 123031284 20 + TSS region transcription start site region 68928
Tssr68929 7 123031346 to 123031392 46 + TSS region transcription start site region 68929
Gm45846 7 123031374 to 123169678 138304 + lincRNA gene predicted gene 45846
Gm45847 7 123031415 to 123068305 36890 + lincRNA gene predicted gene 45847
Tssr68930 7 123057135 to 123057139 4 + TSS region transcription start site region 68930
Gm39084 7 123075587 to 123100717 25130 - lncRNA gene predicted gene, 39084
Cpgi19673 7 123084600 to 123084894 294 CpG island CpG island 19673
Cpgi19674 7 123123744 to 123124920 1176 CpG island CpG island 19674
Tssr68931 7 123123870 to 123123901 31 + TSS region transcription start site region 68931
Tnrc6a 7 123123885 to 123195296 71411 + protein coding gene trinucleotide repeat containing 6a
Tssr68932 7 123124142 to 123124171 29 + TSS region transcription start site region 68932
Tssr68933 7 123124172 to 123124223 51 + TSS region transcription start site region 68933
Tssr68934 7 123124266 to 123124277 11 + TSS region transcription start site region 68934
Tssr68935 7 123124640 to 123124681 41 + TSS region transcription start site region 68935
Tssr68936 7 123143747 to 123143760 13 + TSS region transcription start site region 68936
Tssr68937 7 123158674 to 123158676 2 + TSS region transcription start site region 68937