Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:122064302-122435025

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ears2 7 122037213 to 122067263 30050 - protein coding gene glutamyl-tRNA synthetase 2, mitochondrial
Cpgi19664 7 122066658 to 122068119 1461 CpG island CpG island 19664
Tssr74570 7 122067039 to 122067080 41 - TSS region transcription start site region 74570
Tssr68853 7 122067164 to 122067216 52 + TSS region transcription start site region 68853
Ubfd1 7 122067183 to 122082199 15016 + protein coding gene ubiquitin family domain containing 1
Tssr68854 7 122067343 to 122067374 31 + TSS region transcription start site region 68854
Tssr68855 7 122067392 to 122067460 68 + TSS region transcription start site region 68855
Tssr68856 7 122078995 to 122079012 17 + TSS region transcription start site region 68856
Tssr68857 7 122079769 to 122079773 4 + TSS region transcription start site region 68857
Tssr68858 7 122080006 to 122080025 19 + TSS region transcription start site region 68858
Ndufab1 7 122088044 to 122101876 13832 - protein coding gene NADH:ubiquinone oxidoreductase subunit AB1
Gm44986 7 122096083 to 122098911 2828 + unclassified gene predicted gene 44986
Cpgi19665 7 122101465 to 122102161 696 CpG island CpG island 19665
Tssr74571 7 122101827 to 122101859 32 - TSS region transcription start site region 74571
Palb2 7 122107262 to 122132980 25718 - protein coding gene partner and localizer of BRCA2
Tssr68859 7 122131053 to 122131065 12 + TSS region transcription start site region 68859
Gm16326 7 122131092 to 122131505 413 + pseudogene predicted gene 16326
Cpgi19666 7 122132490 to 122133439 949 CpG island CpG island 19666
Tssr68860 7 122132575 to 122132580 5 + TSS region transcription start site region 68860
Tssr74572 7 122132863 to 122132943 80 - TSS region transcription start site region 74572
Tssr68861 7 122133036 to 122133050 14 + TSS region transcription start site region 68861
Dctn5 7 122133041 to 122149044 16003 + protein coding gene dynactin 5
Tssr68862 7 122133052 to 122133090 38 + TSS region transcription start site region 68862
Gm15489 7 122139008 to 122159401 20393 - antisense lncRNA gene predicted gene 15489
Tssr68863 7 122148287 to 122148296 9 + TSS region transcription start site region 68863
Cpgi19667 7 122158911 to 122159972 1061 CpG island CpG island 19667
Tssr68864 7 122159422 to 122159501 79 + TSS region transcription start site region 68864
Plk1 7 122159439 to 122169873 10434 + protein coding gene polo like kinase 1
Tssr68865 7 122162405 to 122162447 42 + TSS region transcription start site region 68865
Tssr68866 7 122164067 to 122164086 19 + TSS region transcription start site region 68866
Gm44985 7 122167029 to 122168044 1015 - unclassified gene predicted gene 44985
Ern2 7 122169893 to 122186207 16314 - protein coding gene endoplasmic reticulum (ER) to nucleus signalling 2
Tssr74573 7 122186151 to 122186213 62 - TSS region transcription start site region 74573
Tssr74574 7 122186224 to 122186231 7 - TSS region transcription start site region 74574
Tssr68867 7 122208624 to 122208648 24 + TSS region transcription start site region 68867
Tssr68868 7 122219407 to 122219416 9 + TSS region transcription start site region 68868
Tssr68869 7 122219469 to 122219504 35 + TSS region transcription start site region 68869
Chp2 7 122219496 to 122222824 3328 + protein coding gene calcineurin-like EF hand protein 2
Cpgi19668 7 122219624 to 122219836 212 CpG island CpG island 19668
Tssr68870 7 122219631 to 122219638 7 + TSS region transcription start site region 68870
Tssr68871 7 122219648 to 122219649 1 + TSS region transcription start site region 68871
Tssr68872 7 122219650 to 122219673 23 + TSS region transcription start site region 68872
Tssr68873 7 122219675 to 122219688 13 + TSS region transcription start site region 68873
Tssr68874 7 122219697 to 122219704 7 + TSS region transcription start site region 68874
Gm29903 7 122235265 to 122244231 8966 - lncRNA gene predicted gene, 29903
Gm29977 7 122249302 to 122250025 723 - pseudogene predicted gene, 29977
Gm23614 7 122265094 to 122265200 106 + snRNA gene predicted gene, 23614
Gm30059 7 122267465 to 122273871 6406 + lncRNA gene predicted gene, 30059
Cpgi19669 7 122288612 to 122289970 1358 CpG island CpG island 19669
Tssr68875 7 122288700 to 122288721 21 + TSS region transcription start site region 68875
Tssr68876 7 122288722 to 122288734 12 + TSS region transcription start site region 68876
Tssr68877 7 122288745 to 122288755 10 + TSS region transcription start site region 68877
Tssr68878 7 122289076 to 122289225 149 + TSS region transcription start site region 68878
Prkcb 7 122289125 to 122634402 345277 + protein coding gene protein kinase C, beta
Tssr68879 7 122289310 to 122289347 37 + TSS region transcription start site region 68879
Tssr68880 7 122291315 to 122291323 8 + TSS region transcription start site region 68880
Tssr68881 7 122295751 to 122295755 4 + TSS region transcription start site region 68881
Tssr68882 7 122295784 to 122295789 5 + TSS region transcription start site region 68882
Tssr68883 7 122301267 to 122301278 11 + TSS region transcription start site region 68883
Gm45191 7 122313064 to 122318502 5438 + unclassified gene predicted gene 45191
Tssr68884 7 122337595 to 122337607 12 + TSS region transcription start site region 68884
Gm44664 7 122362000 to 122363785 1785 + unclassified gene predicted gene 44664
Tssr68885 7 122366076 to 122366087 11 + TSS region transcription start site region 68885
Tssr68886 7 122366139 to 122366155 16 + TSS region transcription start site region 68886
Tssr68887 7 122366164 to 122366176 12 + TSS region transcription start site region 68887
Tssr68888 7 122366535 to 122366558 23 + TSS region transcription start site region 68888
Tssr68889 7 122366572 to 122366587 15 + TSS region transcription start site region 68889
Tssr68890 7 122377309 to 122377338 29 + TSS region transcription start site region 68890
Tssr68891 7 122377403 to 122377417 14 + TSS region transcription start site region 68891
Tssr2392 7 122402121 to 122402126 5 - TSS region transcription start site region 2392
Gm44663 7 122402455 to 122405604 3149 + unclassified gene predicted gene 44663
Tssr68892 7 122415714 to 122415720 6 + TSS region transcription start site region 68892