Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:121761567-122201577

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scnn1g 7 121734479 to 121768475 33996 + protein coding gene sodium channel, nonvoltage-gated 1 gamma
Gm36848 7 121768449 to 121777845 9396 - lncRNA gene predicted gene, 36848
Gm44740 7 121837452 to 121839065 1613 - unclassified gene predicted gene 44740
Tssr74559 7 121841078 to 121841081 3 - TSS region transcription start site region 74559
Cpgi19661 7 121864901 to 121865483 582 CpG island CpG island 19661
Tssr68843 7 121865031 to 121865043 12 + TSS region transcription start site region 68843
Scnn1b 7 121865038 to 121918514 53476 + protein coding gene sodium channel, nonvoltage-gated 1 beta
Tssr68844 7 121865051 to 121865065 14 + TSS region transcription start site region 68844
Tssr68845 7 121865070 to 121865093 23 + TSS region transcription start site region 68845
Tssr68846 7 121898337 to 121898359 22 + TSS region transcription start site region 68846
Tssr68847 7 121905620 to 121905632 12 + TSS region transcription start site region 68847
Tssr68848 7 121905648 to 121905662 14 + TSS region transcription start site region 68848
Tssr2391 7 121914148 to 121914157 9 + TSS region transcription start site region 2391
Tssr68849 7 121914210 to 121914230 20 + TSS region transcription start site region 68849
Tssr68850 7 121914297 to 121914303 6 + TSS region transcription start site region 68850
Cog7 7 121922836 to 121981706 58870 - protein coding gene component of oligomeric golgi complex 7
Tssr74560 7 121946280 to 121946326 46 - TSS region transcription start site region 74560
Tssr74561 7 121946356 to 121946369 13 - TSS region transcription start site region 74561
Tssr74562 7 121947138 to 121947142 4 - TSS region transcription start site region 74562
Cpgi19662 7 121981048 to 121981957 909 CpG island CpG island 19662
Tssr74563 7 121981567 to 121981577 10 - TSS region transcription start site region 74563
Tssr74564 7 121981669 to 121981706 37 - TSS region transcription start site region 74564
Tssr74565 7 121981707 to 121981719 12 - TSS region transcription start site region 74565
Tssr68851 7 121981736 to 121981771 35 + TSS region transcription start site region 68851
Gm44987 7 121981761 to 121989116 7355 + antisense lncRNA gene predicted gene 44987
Gga2 7 121986722 to 122021198 34476 - protein coding gene golgi associated, gamma adaptin ear containing, ARF binding protein 2
Tssr74566 7 121993397 to 121993400 3 - TSS region transcription start site region 74566
Tssr68852 7 122014576 to 122014579 3 + TSS region transcription start site region 68852
Cpgi19663 7 122020707 to 122021287 580 CpG island CpG island 19663
Tssr74567 7 122021143 to 122021206 63 - TSS region transcription start site region 74567
Ears2 7 122037213 to 122067263 30050 - protein coding gene glutamyl-tRNA synthetase 2, mitochondrial
Tssr74568 7 122046901 to 122046911 10 - TSS region transcription start site region 74568
Tssr74569 7 122046914 to 122046933 19 - TSS region transcription start site region 74569
Cpgi19664 7 122066658 to 122068119 1461 CpG island CpG island 19664
Tssr74570 7 122067039 to 122067080 41 - TSS region transcription start site region 74570
Tssr68853 7 122067164 to 122067216 52 + TSS region transcription start site region 68853
Ubfd1 7 122067183 to 122082199 15016 + protein coding gene ubiquitin family domain containing 1
Tssr68854 7 122067343 to 122067374 31 + TSS region transcription start site region 68854
Tssr68855 7 122067392 to 122067460 68 + TSS region transcription start site region 68855
Tssr68856 7 122078995 to 122079012 17 + TSS region transcription start site region 68856
Tssr68857 7 122079769 to 122079773 4 + TSS region transcription start site region 68857
Tssr68858 7 122080006 to 122080025 19 + TSS region transcription start site region 68858
Ndufab1 7 122088044 to 122101876 13832 - protein coding gene NADH:ubiquinone oxidoreductase subunit AB1
Gm44986 7 122096083 to 122098911 2828 + unclassified gene predicted gene 44986
Cpgi19665 7 122101465 to 122102161 696 CpG island CpG island 19665
Tssr74571 7 122101827 to 122101859 32 - TSS region transcription start site region 74571
Palb2 7 122107262 to 122132980 25718 - protein coding gene partner and localizer of BRCA2
Tssr68859 7 122131053 to 122131065 12 + TSS region transcription start site region 68859
Gm16326 7 122131092 to 122131505 413 + pseudogene predicted gene 16326
Cpgi19666 7 122132490 to 122133439 949 CpG island CpG island 19666
Tssr68860 7 122132575 to 122132580 5 + TSS region transcription start site region 68860
Tssr74572 7 122132863 to 122132943 80 - TSS region transcription start site region 74572
Tssr68861 7 122133036 to 122133050 14 + TSS region transcription start site region 68861
Dctn5 7 122133041 to 122149044 16003 + protein coding gene dynactin 5
Tssr68862 7 122133052 to 122133090 38 + TSS region transcription start site region 68862
Gm15489 7 122139008 to 122159401 20393 - antisense lncRNA gene predicted gene 15489
Tssr68863 7 122148287 to 122148296 9 + TSS region transcription start site region 68863
Cpgi19667 7 122158911 to 122159972 1061 CpG island CpG island 19667
Tssr68864 7 122159422 to 122159501 79 + TSS region transcription start site region 68864
Plk1 7 122159439 to 122169873 10434 + protein coding gene polo like kinase 1
Tssr68865 7 122162405 to 122162447 42 + TSS region transcription start site region 68865
Tssr68866 7 122164067 to 122164086 19 + TSS region transcription start site region 68866
Gm44985 7 122167029 to 122168044 1015 - unclassified gene predicted gene 44985
Ern2 7 122169893 to 122186207 16314 - protein coding gene endoplasmic reticulum (ER) to nucleus signalling 2
Tssr74573 7 122186151 to 122186213 62 - TSS region transcription start site region 74573
Tssr74574 7 122186224 to 122186231 7 - TSS region transcription start site region 74574