Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:121479447-121889559

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hs3st2 7 121391859 to 121501770 109911 + protein coding gene heparan sulfate (glucosamine) 3-O-sulfotransferase 2
Gm39081 7 121479952 to 121540236 60284 - lncRNA gene predicted gene, 39081
D7Mit204 7 121483802 to 121483933 131 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 204
Tssr74552 7 121517184 to 121517188 4 - TSS region transcription start site region 74552
Tssr74553 7 121520616 to 121520619 3 - TSS region transcription start site region 74553
Cpgi19657 7 121539517 to 121539729 212 CpG island CpG island 19657
4933432K03Rik 7 121587386 to 121589836 2450 - antisense lncRNA gene RIKEN cDNA 4933432K03 gene
Tssr2389 7 121589409 to 121589427 18 - TSS region transcription start site region 2389
Tssr2390 7 121589803 to 121589812 9 - TSS region transcription start site region 2390
Tssr74554 7 121589823 to 121589850 27 - TSS region transcription start site region 74554
Tssr74555 7 121589851 to 121589853 2 - TSS region transcription start site region 74555
Tssr74556 7 121589854 to 121589863 9 - TSS region transcription start site region 74556
1700025J12Rik 7 121589903 to 121591591 1688 + lincRNA gene RIKEN cDNA 1700025J12 gene
Usp31 7 121642021 to 121707253 65232 - protein coding gene ubiquitin specific peptidase 31
D7Mit283 7 121684447 to 121684559 112 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 283
Cpgi19658 7 121706362 to 121707868 1506 CpG island CpG island 19658
1700069B07Rik 7 121707075 to 121708013 938 + antisense lncRNA gene RIKEN cDNA 1700069B07 gene
Tssr74557 7 121707384 to 121707460 76 - TSS region transcription start site region 74557
Tssr74558 7 121707463 to 121707472 9 - TSS region transcription start site region 74558
Cpgi19659 7 121734162 to 121735112 950 CpG island CpG island 19659
Tssr68838 7 121734425 to 121734440 15 + TSS region transcription start site region 68838
Tssr68839 7 121734449 to 121734473 24 + TSS region transcription start site region 68839
Tssr68840 7 121734477 to 121734489 12 + TSS region transcription start site region 68840
Scnn1g 7 121734479 to 121768475 33996 + protein coding gene sodium channel, nonvoltage-gated 1 gamma
Tssr68841 7 121734495 to 121734508 13 + TSS region transcription start site region 68841
Cpgi19660 7 121737964 to 121738374 410 CpG island CpG island 19660
Tssr68842 7 121739401 to 121739405 4 + TSS region transcription start site region 68842
Gm36848 7 121768449 to 121777845 9396 - lncRNA gene predicted gene, 36848
Gm44740 7 121837452 to 121839065 1613 - unclassified gene predicted gene 44740
Tssr74559 7 121841078 to 121841081 3 - TSS region transcription start site region 74559
Cpgi19661 7 121864901 to 121865483 582 CpG island CpG island 19661
Tssr68843 7 121865031 to 121865043 12 + TSS region transcription start site region 68843
Scnn1b 7 121865038 to 121918514 53476 + protein coding gene sodium channel, nonvoltage-gated 1 beta
Tssr68844 7 121865051 to 121865065 14 + TSS region transcription start site region 68844
Tssr68845 7 121865070 to 121865093 23 + TSS region transcription start site region 68845