Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:121071859-121821770

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mettl9 7 121034445 to 121078329 43884 + protein coding gene methyltransferase like 9
Igsf6 7 121064067 to 121074572 10505 - protein coding gene immunoglobulin superfamily, member 6
Tssr74550 7 121074501 to 121074526 25 - TSS region transcription start site region 74550
Tssr74551 7 121074540 to 121074555 15 - TSS region transcription start site region 74551
Tssr68825 7 121074633 to 121074648 15 + TSS region transcription start site region 68825
Tssr68826 7 121074651 to 121074662 11 + TSS region transcription start site region 68826
Tssr68827 7 121074666 to 121074673 7 + TSS region transcription start site region 68827
Tssr68828 7 121074685 to 121074713 28 + TSS region transcription start site region 68828
Tssr68829 7 121074722 to 121074733 11 + TSS region transcription start site region 68829
Tssr68830 7 121075295 to 121075329 34 + TSS region transcription start site region 68830
Tssr68831 7 121075812 to 121075823 11 + TSS region transcription start site region 68831
Tssr68832 7 121075841 to 121075858 17 + TSS region transcription start site region 68832
Tssr68833 7 121083403 to 121083404 1 + TSS region transcription start site region 68833
Tssr68834 7 121083414 to 121083434 20 + TSS region transcription start site region 68834
Otoa 7 121083438 to 121163093 79655 + protein coding gene otoancorin
Tssr68835 7 121089936 to 121089939 3 + TSS region transcription start site region 68835
Tssr68836 7 121089940 to 121089943 3 + TSS region transcription start site region 68836
Gm9240 7 121223253 to 121223994 741 - pseudogene predicted gene 9240
Cpgi19655 7 121245535 to 121246246 711 CpG island CpG island 19655
Gm45079 7 121257359 to 121295852 38493 + lincRNA gene predicted gene 45079
4930486N12Rik 7 121258764 to 121259395 631 - unclassified gene RIKEN cDNA 4930486N12 gene
Gm36736 7 121312974 to 121337213 24239 - antisense lncRNA gene predicted gene, 36736
D7Mit254 7 121324091 to 121324214 123 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 254
Cpgi19656 7 121391576 to 121393343 1767 CpG island CpG island 19656
Hs3st2 7 121391859 to 121501770 109911 + protein coding gene heparan sulfate (glucosamine) 3-O-sulfotransferase 2
Tssr68837 7 121392266 to 121392286 20 + TSS region transcription start site region 68837
Gm39081 7 121479952 to 121540236 60284 - lncRNA gene predicted gene, 39081
D7Mit204 7 121483802 to 121483933 131 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 204
Tssr74552 7 121517184 to 121517188 4 - TSS region transcription start site region 74552
Tssr74553 7 121520616 to 121520619 3 - TSS region transcription start site region 74553
Cpgi19657 7 121539517 to 121539729 212 CpG island CpG island 19657
4933432K03Rik 7 121587386 to 121589836 2450 - antisense lncRNA gene RIKEN cDNA 4933432K03 gene
Tssr2389 7 121589409 to 121589427 18 - TSS region transcription start site region 2389
Tssr2390 7 121589803 to 121589812 9 - TSS region transcription start site region 2390
Tssr74554 7 121589823 to 121589850 27 - TSS region transcription start site region 74554
Tssr74555 7 121589851 to 121589853 2 - TSS region transcription start site region 74555
Tssr74556 7 121589854 to 121589863 9 - TSS region transcription start site region 74556
1700025J12Rik 7 121589903 to 121591591 1688 + lincRNA gene RIKEN cDNA 1700025J12 gene
Usp31 7 121642021 to 121707253 65232 - protein coding gene ubiquitin specific peptidase 31
D7Mit283 7 121684447 to 121684559 112 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 283
Cpgi19658 7 121706362 to 121707868 1506 CpG island CpG island 19658
1700069B07Rik 7 121707075 to 121708013 938 + antisense lncRNA gene RIKEN cDNA 1700069B07 gene
Tssr74557 7 121707384 to 121707460 76 - TSS region transcription start site region 74557
Tssr74558 7 121707463 to 121707472 9 - TSS region transcription start site region 74558
Cpgi19659 7 121734162 to 121735112 950 CpG island CpG island 19659
Tssr68838 7 121734425 to 121734440 15 + TSS region transcription start site region 68838
Tssr68839 7 121734449 to 121734473 24 + TSS region transcription start site region 68839
Tssr68840 7 121734477 to 121734489 12 + TSS region transcription start site region 68840
Scnn1g 7 121734479 to 121768475 33996 + protein coding gene sodium channel, nonvoltage-gated 1 gamma
Tssr68841 7 121734495 to 121734508 13 + TSS region transcription start site region 68841
Cpgi19660 7 121737964 to 121738374 410 CpG island CpG island 19660
Tssr68842 7 121739401 to 121739405 4 + TSS region transcription start site region 68842
Gm36848 7 121768449 to 121777845 9396 - lncRNA gene predicted gene, 36848