Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:120898802-122068933

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152 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eef2k 7 120842829 to 120907219 64390 + protein coding gene eukaryotic elongation factor-2 kinase
Cpgi19652 7 120917456 to 120918541 1085 CpG island CpG island 19652
n-TLaag4 7 120917517 to 120917598 81 + tRNA gene nuclear encoded tRNA leucine 4 (anticodon AAG)
Polr3e 7 120917744 to 120947432 29688 + protein coding gene polymerase (RNA) III (DNA directed) polypeptide E
Tssr68802 7 120917769 to 120917815 46 + TSS region transcription start site region 68802
Tssr68803 7 120940617 to 120940659 42 + TSS region transcription start site region 68803
Tssr68804 7 120940665 to 120940685 20 + TSS region transcription start site region 68804
Cdr2 7 120957036 to 120982312 25276 - protein coding gene cerebellar degeneration-related 2
Cpgi19653 7 120981545 to 120982773 1228 CpG island CpG island 19653
Tssr74529 7 120982260 to 120982305 45 - TSS region transcription start site region 74529
Tssr74530 7 120982323 to 120982332 9 - TSS region transcription start site region 74530
Tssr68805 7 120982480 to 120982489 9 + TSS region transcription start site region 68805
Tssr68806 7 120982496 to 120982514 18 + TSS region transcription start site region 68806
Mfsd13b 7 120982509 to 121014787 32278 + protein coding gene major facilitator superfamily domain containing 13B
Tssr68807 7 120982521 to 120982546 25 + TSS region transcription start site region 68807
Tssr68808 7 120982549 to 120982552 3 + TSS region transcription start site region 68808
Gm9234 7 121015142 to 121015633 491 - pseudogene predicted pseudogene 9234
Gm25924 7 121024360 to 121024462 102 - snRNA gene predicted gene, 25924
D7Mit240 7 121031359 to 121031460 101 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 240
Tssr68809 7 121032473 to 121032520 47 + TSS region transcription start site region 68809
Tssr68810 7 121032755 to 121032767 12 + TSS region transcription start site region 68810
Tssr68811 7 121032776 to 121032787 11 + TSS region transcription start site region 68811
Tssr68812 7 121032791 to 121032802 11 + TSS region transcription start site region 68812
Gm9905 7 121033252 to 121035096 1844 - protein coding gene predicted gene 9905
Cpgi19654 7 121034034 to 121035548 1514 CpG island CpG island 19654
Tssr68813 7 121034416 to 121034421 5 + TSS region transcription start site region 68813
Tssr74531 7 121034423 to 121034450 27 - TSS region transcription start site region 74531
Mettl9 7 121034445 to 121078329 43884 + protein coding gene methyltransferase like 9
Tssr68814 7 121034520 to 121034529 9 + TSS region transcription start site region 68814
Tssr68815 7 121034542 to 121034580 38 + TSS region transcription start site region 68815
Tssr68816 7 121034581 to 121034718 137 + TSS region transcription start site region 68816
Tssr68817 7 121034739 to 121034765 26 + TSS region transcription start site region 68817
Tssr68818 7 121034782 to 121034793 11 + TSS region transcription start site region 68818
Tssr68819 7 121035560 to 121035566 6 + TSS region transcription start site region 68819
Tssr68820 7 121035619 to 121035660 41 + TSS region transcription start site region 68820
Tssr68821 7 121036666 to 121036673 7 + TSS region transcription start site region 68821
Gm9179 7 121037107 to 121040269 3162 - pseudogene predicted gene 9179
Gm45137 7 121039138 to 121043552 4414 + unclassified gene predicted gene 45137
Gm27991 7 121040344 to 121040480 136 - snoRNA gene predicted gene, 27991
Tssr68822 7 121046005 to 121046018 13 + TSS region transcription start site region 68822
Gm44901 7 121052345 to 121056321 3976 + unclassified gene predicted gene 44901
Tssr68823 7 121053730 to 121053734 4 + TSS region transcription start site region 68823
2210406H18Rik 7 121062852 to 121063959 1107 - unclassified gene RIKEN cDNA 2210406H18 gene
D7Mit58 7 121064036 to 121064185 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 58
Igsf6 7 121064067 to 121074572 10505 - protein coding gene immunoglobulin superfamily, member 6
Tssr74532 7 121064168 to 121064184 16 - TSS region transcription start site region 74532
Tssr74533 7 121064189 to 121064202 13 - TSS region transcription start site region 74533
Tssr74534 7 121064218 to 121064223 5 - TSS region transcription start site region 74534
Tssr74535 7 121064244 to 121064254 10 - TSS region transcription start site region 74535
Tssr74536 7 121064285 to 121064296 11 - TSS region transcription start site region 74536
Tssr74537 7 121064326 to 121064340 14 - TSS region transcription start site region 74537
Tssr74538 7 121064385 to 121064394 9 - TSS region transcription start site region 74538
Tssr74539 7 121064464 to 121064478 14 - TSS region transcription start site region 74539
Tssr74540 7 121064480 to 121064497 17 - TSS region transcription start site region 74540
Tssr74541 7 121064635 to 121064647 12 - TSS region transcription start site region 74541
Tssr74542 7 121064679 to 121064702 23 - TSS region transcription start site region 74542
Tssr74543 7 121064770 to 121064795 25 - TSS region transcription start site region 74543
Tssr74544 7 121064842 to 121064856 14 - TSS region transcription start site region 74544
Tssr68824 7 121065116 to 121065136 20 + TSS region transcription start site region 68824
Tssr74545 7 121065297 to 121065367 70 - TSS region transcription start site region 74545
Tssr74546 7 121065800 to 121065812 12 - TSS region transcription start site region 74546
Tssr74547 7 121068281 to 121068357 76 - TSS region transcription start site region 74547
Tssr74548 7 121069598 to 121069610 12 - TSS region transcription start site region 74548
Tssr74549 7 121069669 to 121069674 5 - TSS region transcription start site region 74549
Tssr74550 7 121074501 to 121074526 25 - TSS region transcription start site region 74550
Tssr74551 7 121074540 to 121074555 15 - TSS region transcription start site region 74551
Tssr68825 7 121074633 to 121074648 15 + TSS region transcription start site region 68825
Tssr68826 7 121074651 to 121074662 11 + TSS region transcription start site region 68826
Tssr68827 7 121074666 to 121074673 7 + TSS region transcription start site region 68827
Tssr68828 7 121074685 to 121074713 28 + TSS region transcription start site region 68828
Tssr68829 7 121074722 to 121074733 11 + TSS region transcription start site region 68829
Tssr68830 7 121075295 to 121075329 34 + TSS region transcription start site region 68830
Tssr68831 7 121075812 to 121075823 11 + TSS region transcription start site region 68831
Tssr68832 7 121075841 to 121075858 17 + TSS region transcription start site region 68832
Tssr68833 7 121083403 to 121083404 1 + TSS region transcription start site region 68833
Tssr68834 7 121083414 to 121083434 20 + TSS region transcription start site region 68834
Otoa 7 121083438 to 121163093 79655 + protein coding gene otoancorin
Tssr68835 7 121089936 to 121089939 3 + TSS region transcription start site region 68835
Tssr68836 7 121089940 to 121089943 3 + TSS region transcription start site region 68836
Gm9240 7 121223253 to 121223994 741 - pseudogene predicted gene 9240
Cpgi19655 7 121245535 to 121246246 711 CpG island CpG island 19655
Gm45079 7 121257359 to 121295852 38493 + lincRNA gene predicted gene 45079
4930486N12Rik 7 121258764 to 121259395 631 - unclassified gene RIKEN cDNA 4930486N12 gene
Gm36736 7 121312974 to 121337213 24239 - antisense lncRNA gene predicted gene, 36736
D7Mit254 7 121324091 to 121324214 123 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 254
Cpgi19656 7 121391576 to 121393343 1767 CpG island CpG island 19656
Hs3st2 7 121391859 to 121501770 109911 + protein coding gene heparan sulfate (glucosamine) 3-O-sulfotransferase 2
Tssr68837 7 121392266 to 121392286 20 + TSS region transcription start site region 68837
Gm39081 7 121479952 to 121540236 60284 - lncRNA gene predicted gene, 39081
D7Mit204 7 121483802 to 121483933 131 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 204
Tssr74552 7 121517184 to 121517188 4 - TSS region transcription start site region 74552
Tssr74553 7 121520616 to 121520619 3 - TSS region transcription start site region 74553
Cpgi19657 7 121539517 to 121539729 212 CpG island CpG island 19657
4933432K03Rik 7 121587386 to 121589836 2450 - antisense lncRNA gene RIKEN cDNA 4933432K03 gene
Tssr2389 7 121589409 to 121589427 18 - TSS region transcription start site region 2389
Tssr2390 7 121589803 to 121589812 9 - TSS region transcription start site region 2390
Tssr74554 7 121589823 to 121589850 27 - TSS region transcription start site region 74554
Tssr74555 7 121589851 to 121589853 2 - TSS region transcription start site region 74555
Tssr74556 7 121589854 to 121589863 9 - TSS region transcription start site region 74556
1700025J12Rik 7 121589903 to 121591591 1688 + lincRNA gene RIKEN cDNA 1700025J12 gene
Usp31 7 121642021 to 121707253 65232 - protein coding gene ubiquitin specific peptidase 31
D7Mit283 7 121684447 to 121684559 112 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 283
Cpgi19658 7 121706362 to 121707868 1506 CpG island CpG island 19658
1700069B07Rik 7 121707075 to 121708013 938 + antisense lncRNA gene RIKEN cDNA 1700069B07 gene
Tssr74557 7 121707384 to 121707460 76 - TSS region transcription start site region 74557
Tssr74558 7 121707463 to 121707472 9 - TSS region transcription start site region 74558
Cpgi19659 7 121734162 to 121735112 950 CpG island CpG island 19659
Tssr68838 7 121734425 to 121734440 15 + TSS region transcription start site region 68838
Tssr68839 7 121734449 to 121734473 24 + TSS region transcription start site region 68839
Tssr68840 7 121734477 to 121734489 12 + TSS region transcription start site region 68840
Scnn1g 7 121734479 to 121768475 33996 + protein coding gene sodium channel, nonvoltage-gated 1 gamma
Tssr68841 7 121734495 to 121734508 13 + TSS region transcription start site region 68841
Cpgi19660 7 121737964 to 121738374 410 CpG island CpG island 19660
Tssr68842 7 121739401 to 121739405 4 + TSS region transcription start site region 68842
Gm36848 7 121768449 to 121777845 9396 - lncRNA gene predicted gene, 36848
Gm44740 7 121837452 to 121839065 1613 - unclassified gene predicted gene 44740
Tssr74559 7 121841078 to 121841081 3 - TSS region transcription start site region 74559
Cpgi19661 7 121864901 to 121865483 582 CpG island CpG island 19661
Tssr68843 7 121865031 to 121865043 12 + TSS region transcription start site region 68843
Scnn1b 7 121865038 to 121918514 53476 + protein coding gene sodium channel, nonvoltage-gated 1 beta
Tssr68844 7 121865051 to 121865065 14 + TSS region transcription start site region 68844
Tssr68845 7 121865070 to 121865093 23 + TSS region transcription start site region 68845
Tssr68846 7 121898337 to 121898359 22 + TSS region transcription start site region 68846
Tssr68847 7 121905620 to 121905632 12 + TSS region transcription start site region 68847
Tssr68848 7 121905648 to 121905662 14 + TSS region transcription start site region 68848
Tssr2391 7 121914148 to 121914157 9 + TSS region transcription start site region 2391
Tssr68849 7 121914210 to 121914230 20 + TSS region transcription start site region 68849
Tssr68850 7 121914297 to 121914303 6 + TSS region transcription start site region 68850
Cog7 7 121922836 to 121981706 58870 - protein coding gene component of oligomeric golgi complex 7
Tssr74560 7 121946280 to 121946326 46 - TSS region transcription start site region 74560
Tssr74561 7 121946356 to 121946369 13 - TSS region transcription start site region 74561
Tssr74562 7 121947138 to 121947142 4 - TSS region transcription start site region 74562
Cpgi19662 7 121981048 to 121981957 909 CpG island CpG island 19662
Tssr74563 7 121981567 to 121981577 10 - TSS region transcription start site region 74563
Tssr74564 7 121981669 to 121981706 37 - TSS region transcription start site region 74564
Tssr74565 7 121981707 to 121981719 12 - TSS region transcription start site region 74565
Tssr68851 7 121981736 to 121981771 35 + TSS region transcription start site region 68851
Gm44987 7 121981761 to 121989116 7355 + antisense lncRNA gene predicted gene 44987
Gga2 7 121986722 to 122021198 34476 - protein coding gene golgi associated, gamma adaptin ear containing, ARF binding protein 2
Tssr74566 7 121993397 to 121993400 3 - TSS region transcription start site region 74566
Tssr68852 7 122014576 to 122014579 3 + TSS region transcription start site region 68852
Cpgi19663 7 122020707 to 122021287 580 CpG island CpG island 19663
Tssr74567 7 122021143 to 122021206 63 - TSS region transcription start site region 74567
Ears2 7 122037213 to 122067263 30050 - protein coding gene glutamyl-tRNA synthetase 2, mitochondrial
Tssr74568 7 122046901 to 122046911 10 - TSS region transcription start site region 74568
Tssr74569 7 122046914 to 122046933 19 - TSS region transcription start site region 74569
Cpgi19664 7 122066658 to 122068119 1461 CpG island CpG island 19664
Tssr74570 7 122067039 to 122067080 41 - TSS region transcription start site region 74570
Tssr68853 7 122067164 to 122067216 52 + TSS region transcription start site region 68853
Ubfd1 7 122067183 to 122082199 15016 + protein coding gene ubiquitin family domain containing 1
Tssr68854 7 122067343 to 122067374 31 + TSS region transcription start site region 68854
Tssr68855 7 122067392 to 122067460 68 + TSS region transcription start site region 68855