Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:120742829-121007219

36 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vwa3a	7	120739318 to 120805742	66424	+	protein coding gene	von Willebrand factor A domain containing 3A
Tssr74526	7	120751372 to 120751375	3	-	TSS region	transcription start site region 74526
Tssr74527	7	120754091 to 120754135	44	-	TSS region	transcription start site region 74527
Cpgi19648	7	120809789 to 120810209	420		CpG island	CpG island 19648
Gm5737	7	120812365 to 120831193	18828	+	protein coding gene	predicted gene 5737
Cpgi19649	7	120830687 to 120831471	784		CpG island	CpG island 19649
n-TLtag1	7	120835479 to 120835560	81	-	tRNA gene	nuclear encoded tRNA leucine 1 (anticodon TAG)
Cpgi19650	7	120835527 to 120836111	584		CpG island	CpG island 19650
Gm36449	7	120841127 to 120842637	1510	-	lncRNA gene	predicted gene, 36449
Cpgi19651	7	120842663 to 120843758	1095		CpG island	CpG island 19651
Tssr68795	7	120842743 to 120842758	15	+	TSS region	transcription start site region 68795
Tssr68796	7	120842824 to 120842836	12	+	TSS region	transcription start site region 68796
Eef2k	7	120842829 to 120907219	64390	+	protein coding gene	eukaryotic elongation factor-2 kinase
Tssr68797	7	120842838 to 120842910	72	+	TSS region	transcription start site region 68797
Tssr68798	7	120842916 to 120842925	9	+	TSS region	transcription start site region 68798
Tssr68799	7	120843551 to 120843572	21	+	TSS region	transcription start site region 68799
Tssr68800	7	120851183 to 120851194	11	+	TSS region	transcription start site region 68800
Gm15774	7	120871391 to 120880298	8907	-	antisense lncRNA gene	predicted gene 15774
Tssr68801	7	120876204 to 120876227	23	+	TSS region	transcription start site region 68801
Tssr74528	7	120880909 to 120880911	2	-	TSS region	transcription start site region 74528
Gm45047	7	120890705 to 120891013	308	+	unclassified gene	predicted gene 45047
Cpgi19652	7	120917456 to 120918541	1085		CpG island	CpG island 19652
n-TLaag4	7	120917517 to 120917598	81	+	tRNA gene	nuclear encoded tRNA leucine 4 (anticodon AAG)
Polr3e	7	120917744 to 120947432	29688	+	protein coding gene	polymerase (RNA) III (DNA directed) polypeptide E
Tssr68802	7	120917769 to 120917815	46	+	TSS region	transcription start site region 68802
Tssr68803	7	120940617 to 120940659	42	+	TSS region	transcription start site region 68803
Tssr68804	7	120940665 to 120940685	20	+	TSS region	transcription start site region 68804
Cdr2	7	120957036 to 120982312	25276	-	protein coding gene	cerebellar degeneration-related 2
Cpgi19653	7	120981545 to 120982773	1228		CpG island	CpG island 19653
Tssr74529	7	120982260 to 120982305	45	-	TSS region	transcription start site region 74529
Tssr74530	7	120982323 to 120982332	9	-	TSS region	transcription start site region 74530
Tssr68805	7	120982480 to 120982489	9	+	TSS region	transcription start site region 68805
Tssr68806	7	120982496 to 120982514	18	+	TSS region	transcription start site region 68806
Mfsd13b	7	120982509 to 121014787	32278	+	protein coding gene	major facilitator superfamily domain containing 13B
Tssr68807	7	120982521 to 120982546	25	+	TSS region	transcription start site region 68807
Tssr68808	7	120982549 to 120982552	3	+	TSS region	transcription start site region 68808