Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 7:120639318-120905742

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41 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ifbl3 7 120484415 to 120693266 208851 QTL interfrontal bone length 3
Ifbw2 7 120484415 to 120693266 208851 QTL interfrontal bone width 2
Uqcrc2 7 120635189 to 120659523 24334 + protein coding gene ubiquinol cytochrome c reductase core protein 2
Pdzd9 7 120658731 to 120670343 11612 - protein coding gene PDZ domain containing 9
Tssr74523 7 120670222 to 120670228 6 - TSS region transcription start site region 74523
Tssr74524 7 120670239 to 120670255 16 - TSS region transcription start site region 74524
Tssr74525 7 120670256 to 120670263 7 - TSS region transcription start site region 74525
4930588G17Rik 7 120670296 to 120675902 5606 + lncRNA gene RIKEN cDNA 4930588G17 gene
9030407P20Rik 7 120673436 to 120677570 4134 - lncRNA gene RIKEN cDNA 9030407P20 gene
Cpgi19647 7 120677187 to 120678426 1239 CpG island CpG island 19647
Tssr68789 7 120677579 to 120677630 51 + TSS region transcription start site region 68789
Mosmo 7 120677620 to 120734854 57234 + protein coding gene modulator of smoothened
Gm51495 7 120691906 to 120694594 2688 + lncRNA gene predicted gene, 51495
Gm44661 7 120736459 to 120739961 3502 - unclassified gene predicted gene 44661
Vwa3a 7 120739318 to 120805742 66424 + protein coding gene von Willebrand factor A domain containing 3A
Tssr68790 7 120739522 to 120739544 22 + TSS region transcription start site region 68790
Tssr68791 7 120739884 to 120739908 24 + TSS region transcription start site region 68791
Tssr68792 7 120739913 to 120739925 12 + TSS region transcription start site region 68792
Tssr68793 7 120740005 to 120740036 31 + TSS region transcription start site region 68793
Tssr68794 7 120740037 to 120740051 14 + TSS region transcription start site region 68794
Tssr74526 7 120751372 to 120751375 3 - TSS region transcription start site region 74526
Tssr74527 7 120754091 to 120754135 44 - TSS region transcription start site region 74527
Cpgi19648 7 120809789 to 120810209 420 CpG island CpG island 19648
Gm5737 7 120812365 to 120831193 18828 + protein coding gene predicted gene 5737
Cpgi19649 7 120830687 to 120831471 784 CpG island CpG island 19649
n-TLtag1 7 120835479 to 120835560 81 - tRNA gene nuclear encoded tRNA leucine 1 (anticodon TAG)
Cpgi19650 7 120835527 to 120836111 584 CpG island CpG island 19650
Gm36449 7 120841127 to 120843511 2384 - lncRNA gene predicted gene, 36449
Eef2k 7 120842642 to 120907219 64577 + protein coding gene eukaryotic elongation factor-2 kinase
Cpgi19651 7 120842663 to 120843758 1095 CpG island CpG island 19651
Tssr68795 7 120842743 to 120842758 15 + TSS region transcription start site region 68795
Tssr68796 7 120842824 to 120842836 12 + TSS region transcription start site region 68796
Tssr68797 7 120842838 to 120842910 72 + TSS region transcription start site region 68797
Tssr68798 7 120842916 to 120842925 9 + TSS region transcription start site region 68798
Tssr68799 7 120843551 to 120843572 21 + TSS region transcription start site region 68799
Tssr68800 7 120851183 to 120851194 11 + TSS region transcription start site region 68800
Gm15774 7 120865509 to 120875298 9789 - lncRNA gene predicted gene 15774
Tssr68801 7 120876204 to 120876227 23 + TSS region transcription start site region 68801
Tssr74528 7 120880909 to 120880911 2 - TSS region transcription start site region 74528
Gm45047 7 120890705 to 120891013 308 + unclassified gene predicted gene 45047
Scvln4 7 120900000 to 70300000 -50600000 QTL sacral vertebrae length 2, 5 week