Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:11970250-12672128

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm3836 7 11970947 to 11972933 1986 + pseudogene predicted gene 3836
Vmn1r-ps58 7 11976950 to 11977789 839 - pseudogene vomeronasal 1 receptor, pseudogene 58
Gm17737 7 11979676 to 11983912 4236 - pseudogene predicted gene, 17737
Tssr70619 7 11988544 to 11988555 11 - TSS region transcription start site region 70619
Tssr70620 7 11988557 to 11988582 25 - TSS region transcription start site region 70620
Cpgi18312 7 11988914 to 11989322 408 CpG island CpG island 18312
Gm45429 7 11991230 to 11991401 171 + pseudogene predicted gene 45429
Vmn1r-ps59 7 11994916 to 11995080 164 + pseudogene vomeronasal 1 receptor, pseudogene 59
Gm18597 7 11996063 to 11996756 693 - pseudogene predicted gene, 18597
Gm17850 7 11997725 to 11999663 1938 - pseudogene predicted gene, 17850
Vmn1r-ps60 7 12005032 to 12005681 649 + pseudogene vomeronasal 1 receptor, pseudogene 60
Gm18854 7 12025451 to 12030404 4953 + pseudogene predicted gene, 18854
Vmn1r77 7 12036846 to 12042219 5373 + protein coding gene vomeronasal 1 receptor 77
Gm10179 7 12085925 to 12086612 687 - pseudogene predicted gene 10179
Vmn1r-ps61 7 12091277 to 12092098 821 + pseudogene vomeronasal 1 receptor, pseudogene 61
Gm45562 7 12101624 to 12105427 3803 - pseudogene predicted gene 45562
Vmn1r-ps62 7 12113259 to 12114076 817 + pseudogene vomeronasal 1 receptor, pseudogene 62
Gm45498 7 12123641 to 12123923 282 + pseudogene predicted gene 45498
Vmn1r-ps63 7 12138326 to 12139311 985 + pseudogene vomeronasal 1 receptor, pseudogene 63
Vmn1r78 7 12152464 to 12153405 941 + protein coding gene vomeronasal 1 receptor 78
Gm45365 7 12157091 to 12157346 255 + pseudogene predicted gene 45365
Vmn1r79 7 12176193 to 12177113 920 + protein coding gene vomeronasal 1 receptor 79
Gm19201 7 12182468 to 12183245 777 - pseudogene predicted gene, 19201
Vmn1r80 7 12192965 to 12193891 926 + protein coding gene vomeronasal 1 receptor 80
Vmn1r-ps64 7 12201702 to 12202356 654 + pseudogene vomeronasal 1 receptor, pseudogene 64
Gm45364 7 12206195 to 12206353 158 - pseudogene predicted gene 45364
Vmn1r-ps65 7 12214595 to 12215545 950 + pseudogene vomeronasal 1 receptor, pseudogene 65
Gm45367 7 12220096 to 12220442 346 - pseudogene predicted gene 45367
Gm4224 7 12221316 to 12225807 4491 + lincRNA gene predicted gene 4224
Vmn1r81 7 12259759 to 12260679 920 - protein coding gene vomeronasal 1 receptor 81
Vmn1r82 7 12304805 to 12305719 914 + protein coding gene vomeronasal 1 receptor 82
Vmn1r83 7 12320250 to 12322128 1878 - protein coding gene vomeronasal 1 receptor 83
Gm23521 7 12358898 to 12359007 109 - miRNA gene predicted gene, 23521
Vmn1r84 7 12361808 to 12362764 956 - protein coding gene vomeronasal 1 receptor 84
Vmn1r-ps66 7 12392272 to 12392883 611 - pseudogene vomeronasal 1 receptor, pseudogene 66
Vmn1r-ps67 7 12399048 to 12399726 678 - pseudogene vomeronasal 1 receptor, pseudogene 67
Vmn1r-ps68 7 12404099 to 12404485 386 - pseudogene vomeronasal 1 receptor, pseudogene 68
Zfp551 7 12415153 to 12422751 7598 - protein coding gene zinc fingr protein 551
Cpgi18313 7 12422331 to 12422775 444 CpG island CpG island 18313
Vmn2r-ps53 7 12445358 to 12468852 23494 + pseudogene vomeronasal 2, receptor, pseudogene 53
Cpgi18314 7 12478164 to 12478827 663 CpG island CpG island 18314
Zfp606 7 12478293 to 12496235 17942 + protein coding gene zinc finger protein 606
Tssr64471 7 12478294 to 12478313 19 + TSS region transcription start site region 64471
Tssr64472 7 12478319 to 12478372 53 + TSS region transcription start site region 64472
Tssr64473 7 12479154 to 12479159 5 + TSS region transcription start site region 64473
2700057C20Rik 7 12498749 to 12499846 1097 unclassified gene RIKEN cDNA 2700057C20 gene
Tssr64474 7 12512488 to 12512512 24 + TSS region transcription start site region 64474
Tssr64475 7 12512513 to 12512520 7 + TSS region transcription start site region 64475
2900092C05Rik 7 12512517 to 12556323 43806 + protein coding gene RIKEN cDNA 2900092C05 gene
Tssr64476 7 12512522 to 12512540 18 + TSS region transcription start site region 64476
Gm15877 7 12517405 to 12518368 963 + pseudogene predicted gene 15877
Gm45475 7 12559860 to 12560168 308 + pseudogene predicted gene 45475
Vmn2r53 7 12581470 to 12606544 25074 - protein coding gene vomeronasal 2, receptor 53
Gm15773 7 12603196 to 12604643 1447 + pseudogene predicted gene 15773
Tssr64477 7 12603573 to 12603600 27 + TSS region transcription start site region 64477
Tssr64478 7 12603725 to 12603730 5 + TSS region transcription start site region 64478
Vmn2r54 7 12615233 to 12636134 20901 - protein coding gene vomeronasal 2, receptor 54
Vmn2r55 7 12651706 to 12684991 33285 - protein coding gene vomeronasal 2, receptor 55