Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:119693667-119894610

42 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Acsm4	7	119690026 to 119714565	24539	+	protein coding gene	acyl-CoA synthetase medium-chain family member 4
Thumpd1	7	119715093 to 119720798	5705	-	protein coding gene	THUMP domain containing 1
Cpgi19634	7	119720200 to 119721031	831		CpG island	CpG island 19634
Tssr68751	7	119720417 to 119720425	8	+	TSS region	transcription start site region 68751
Tssr74498	7	119720742 to 119720803	61	-	TSS region	transcription start site region 74498
Gm44866	7	119720811 to 119735760	14949	-	lincRNA gene	predicted gene 44866
Tssr68752	7	119730735 to 119730740	5	+	TSS region	transcription start site region 68752
Gm39080	7	119730804 to 119739429	8625	+	lncRNA gene	predicted gene, 39080
Cpgi19635	7	119739830 to 119740113	283		CpG island	CpG island 19635
Tssr68753	7	119739882 to 119739910	28	+	TSS region	transcription start site region 68753
Ppp1ccb	7	119739926 to 119742226	2300	+	pseudogene	protein phosphatase 1 catalytic subunit gamma B
Gm19963	7	119742856 to 119744110	1254	-	pseudogene	predicted gene, 19963
Cpgi19636	7	119744172 to 119744698	526		CpG island	CpG island 19636
Gm44966	7	119752677 to 119752833	156	+	pseudogene	predicted gene 44966
Tssr74499	7	119760795 to 119760838	43	-	TSS region	transcription start site region 74499
Acsm3	7	119760883 to 119784896	24013	+	protein coding gene	acyl-CoA synthetase medium-chain family member 3
Tssr68754	7	119760918 to 119760934	16	+	TSS region	transcription start site region 68754
Tssr68755	7	119760943 to 119760963	20	+	TSS region	transcription start site region 68755
Tssr68756	7	119760981 to 119760988	7	+	TSS region	transcription start site region 68756
Eri2	7	119783826 to 119794058	10232	-	protein coding gene	exoribonuclease 2
Cpgi19637	7	119793667 to 119794610	943		CpG island	CpG island 19637
Tssr68757	7	119793741 to 119793752	11	+	TSS region	transcription start site region 68757
Tssr74500	7	119793945 to 119793956	11	-	TSS region	transcription start site region 74500
Tssr74501	7	119793958 to 119793992	34	-	TSS region	transcription start site region 74501
Tssr68758	7	119793987 to 119794012	25	+	TSS region	transcription start site region 68758
Rexo5	7	119794006 to 119848943	54937	+	protein coding gene	RNA exonuclease 5
Tssr68759	7	119794021 to 119794045	24	+	TSS region	transcription start site region 68759
Tssr68760	7	119794102 to 119794157	55	+	TSS region	transcription start site region 68760
Tssr68761	7	119794268 to 119794294	26	+	TSS region	transcription start site region 68761
Dcun1d3	7	119853158 to 119896169	43011	-	protein coding gene	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
Tssr68762	7	119861492 to 119861525	33	+	TSS region	transcription start site region 68762
Tssr74502	7	119861827 to 119861863	36	-	TSS region	transcription start site region 74502
Tssr2388	7	119878682 to 119878686	4	-	TSS region	transcription start site region 2388
Tsiq1	7	119885996 to 125542177	5656181		QTL	T cell secretion of IL4 QTL 1
Nilac4	7	119885996 to 119886157	161		QTL	nicotine induced locomotor activity 4
D7Mit66	7	119885996 to 119886157	161		DNA segment	DNA segment, Chr 7, Massachusetts Institute of Technology 66
Sst2	7	119886157 to 18994869	-100891288		QTL	susceptibility to tuberculosis 2
Idd27	7	119886157 to 79376386	-40509771		QTL	insulin dependent diabetes susceptibility 27
Capsq3	7	119886157 to 87493929	-32392228		QTL	capsaicin sensitivity related QTL 3
Tssr74503	7	119888320 to 119888324	4	-	TSS region	transcription start site region 74503
Tssr74504	7	119890718 to 119890734	16	-	TSS region	transcription start site region 74504
Tssr74505	7	119893042 to 119893043	1	-	TSS region	transcription start site region 74505