Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:118881123-119731248

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98 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lskcn2 7 108883789 to 119094307 10210518 QTL LSK cell number 2
Iqck 7 118855753 to 118972652 116899 + protein coding gene IQ motif containing K
Tssr68732 7 118912617 to 118912641 24 + TSS region transcription start site region 68732
Tssr68733 7 118937076 to 118937083 7 + TSS region transcription start site region 68733
Tssr68734 7 118937120 to 118937123 3 + TSS region transcription start site region 68734
Gm44763 7 118967668 to 118969686 2018 - antisense lncRNA gene predicted gene 44763
Gprc5b 7 118972047 to 118995211 23164 - protein coding gene G protein-coupled receptor, family C, group 5, member B
Tssr74464 7 118973712 to 118973716 4 - TSS region transcription start site region 74464
Tssr74465 7 118974618 to 118974631 13 - TSS region transcription start site region 74465
Tssr2385 7 118974763 to 118974787 24 - TSS region transcription start site region 2385
Tssr74466 7 118974958 to 118974979 21 - TSS region transcription start site region 74466
Tssr74467 7 118976674 to 118976691 17 - TSS region transcription start site region 74467
Tssr74468 7 118976698 to 118976729 31 - TSS region transcription start site region 74468
Tssr74469 7 118976801 to 118976828 27 - TSS region transcription start site region 74469
Tssr74470 7 118983751 to 118983759 8 - TSS region transcription start site region 74470
Cpgi19629 7 118983928 to 118984555 627 CpG island CpG island 19629
Tssr74471 7 118984038 to 118984069 31 - TSS region transcription start site region 74471
Tssr74472 7 118984077 to 118984101 24 - TSS region transcription start site region 74472
Gm39076 7 118985040 to 118988595 3555 + lncRNA gene predicted gene, 39076
Cpgi19630 7 118993959 to 118995994 2035 CpG island CpG island 19630
Tssr74473 7 118995066 to 118995079 13 - TSS region transcription start site region 74473
Tssr74474 7 118995091 to 118995105 14 - TSS region transcription start site region 74474
Tssr74475 7 118995142 to 118995203 61 - TSS region transcription start site region 74475
Tssr74476 7 118995212 to 118995219 7 - TSS region transcription start site region 74476
Vtbt4 7 119094158 to 119094307 149 QTL vertebral trabecular bone trait 4
Cfld4 7 119094158 to 119094307 149 QTL cystic fibrosis lung disease 4
Cfbw3 7 119094158 to 119094307 149 QTL cystic fibrosis body weight 3
Adbg1 7 119094158 to 144844577 25750419 QTL adult body growth 1
D7Mit238 7 119094158 to 119094307 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 238
Bw1n 7 119094307 to 45512542 -73581765 QTL body weight 1 in NSY
Gpr139 7 119144323 to 119184374 40051 - protein coding gene G protein-coupled receptor 139
Cpgi19631 7 119184166 to 119184793 627 CpG island CpG island 19631
Tssr74477 7 119184527 to 119184546 19 - TSS region transcription start site region 74477
Tssr74478 7 119184548 to 119184572 24 - TSS region transcription start site region 74478
Tssr74479 7 119184598 to 119184619 21 - TSS region transcription start site region 74479
Cpgi19632 7 119185280 to 119185559 279 CpG island CpG island 19632
Stmm2a 7 119283163 to 119283163 0 QTL skin tumor modifier of MSM 2a
Gm4083 7 119301257 to 119301707 450 - pseudogene predicted gene 4083
Gm23321 7 119306123 to 119306248 125 - snoRNA gene predicted gene, 23321
Gp2 7 119442542 to 119459272 16730 - protein coding gene glycoprotein 2 (zymogen granule membrane)
Tssr74480 7 119459266 to 119459280 14 - TSS region transcription start site region 74480
Umod 7 119462708 to 119479262 16554 - protein coding gene uromodulin
Gm44588 7 119462821 to 119472478 9657 + antisense lncRNA gene predicted gene 44588
Tssr74481 7 119472498 to 119472509 11 - TSS region transcription start site region 74481
Cpgi19633 7 119476556 to 119477150 594 CpG island CpG island 19633
Tssr74482 7 119476798 to 119476808 10 - TSS region transcription start site region 74482
Tssr74483 7 119476811 to 119476819 8 - TSS region transcription start site region 74483
Tssr68735 7 119476943 to 119476945 2 + TSS region transcription start site region 68735
Tssr74484 7 119479169 to 119479185 16 - TSS region transcription start site region 74484
Tssr74485 7 119479249 to 119479260 11 - TSS region transcription start site region 74485
Tssr2386 7 119479366 to 119479402 36 - TSS region transcription start site region 2386
Pdilt 7 119486587 to 119523489 36902 - protein coding gene protein disulfide isomerase-like, testis expressed
Gm37518 7 119498677 to 119501279 2602 + unclassified gene predicted gene, 37518
Gm26967 7 119512000 to 119514302 2302 - sense intronic lncRNA gene predicted gene, 26967
Tssr74486 7 119523462 to 119523474 12 - TSS region transcription start site region 74486
Tssr74487 7 119523477 to 119523491 14 - TSS region transcription start site region 74487
Acsm5 7 119526131 to 119543360 17229 + protein coding gene acyl-CoA synthetase medium-chain family member 5
Tssr68736 7 119526180 to 119526200 20 + TSS region transcription start site region 68736
Tssr68737 7 119526202 to 119526218 16 + TSS region transcription start site region 68737
Tssr68738 7 119526220 to 119526264 44 + TSS region transcription start site region 68738
Tssr68739 7 119526269 to 119526300 31 + TSS region transcription start site region 68739
Tssr68740 7 119526323 to 119526334 11 + TSS region transcription start site region 68740
Acsm2 7 119554340 to 119600690 46350 + protein coding gene acyl-CoA synthetase medium-chain family member 2
Tssr68741 7 119561699 to 119561726 27 + TSS region transcription start site region 68741
Tssr68742 7 119580930 to 119580934 4 + TSS region transcription start site region 68742
Tssr68743 7 119596035 to 119596045 10 + TSS region transcription start site region 68743
Tssr68744 7 119596114 to 119596121 7 + TSS region transcription start site region 68744
Tssr68745 7 119596765 to 119596770 5 + TSS region transcription start site region 68745
Tssr2387 7 119597257 to 119597264 7 + TSS region transcription start site region 2387
Tssr74488 7 119601113 to 119601118 5 - TSS region transcription start site region 74488
Gm39078 7 119603249 to 119604834 1585 - lincRNA gene predicted gene, 39078
Tssr68746 7 119606813 to 119606837 24 + TSS region transcription start site region 68746
Tssr68747 7 119607014 to 119607029 15 + TSS region transcription start site region 68747
Gm39079 7 119610690 to 119620435 9745 - lncRNA gene predicted gene, 39079
Tssr74489 7 119615712 to 119615716 4 - TSS region transcription start site region 74489
Acsm1 7 119617763 to 119662515 44752 + protein coding gene acyl-CoA synthetase medium-chain family member 1
Tssr68748 7 119617793 to 119617802 9 + TSS region transcription start site region 68748
Tssr68749 7 119617804 to 119617819 15 + TSS region transcription start site region 68749
Tssr74490 7 119620255 to 119620337 82 - TSS region transcription start site region 74490
Tssr74491 7 119620339 to 119620362 23 - TSS region transcription start site region 74491
Tssr74492 7 119620396 to 119620400 4 - TSS region transcription start site region 74492
Gm19950 7 119626519 to 119642645 16126 - antisense lncRNA gene predicted gene, 19950
Gm45792 7 119626519 to 119631058 4539 - antisense lncRNA gene predicted gene 45792
Tssr74493 7 119627765 to 119627774 9 - TSS region transcription start site region 74493
Tssr74494 7 119631611 to 119631618 7 - TSS region transcription start site region 74494
Tssr68750 7 119640297 to 119640305 8 + TSS region transcription start site region 68750
Tssr74495 7 119642414 to 119642431 17 - TSS region transcription start site region 74495
Tssr74496 7 119642436 to 119642449 13 - TSS region transcription start site region 74496
Tssr74497 7 119642454 to 119642466 12 - TSS region transcription start site region 74497
D7Mit330 7 119656690 to 119656814 124 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 330
Acsm4 7 119690026 to 119714565 24539 + protein coding gene acyl-CoA synthetase medium-chain family member 4
Thumpd1 7 119715093 to 119720798 5705 - protein coding gene THUMP domain containing 1
Cpgi19634 7 119720200 to 119721031 831 CpG island CpG island 19634
Tssr68751 7 119720417 to 119720425 8 + TSS region transcription start site region 68751
Tssr74498 7 119720742 to 119720803 61 - TSS region transcription start site region 74498
Gm44866 7 119720811 to 119735760 14949 - lincRNA gene predicted gene 44866
Tssr68752 7 119730735 to 119730740 5 + TSS region transcription start site region 68752
Gm39080 7 119730804 to 119739429 8625 + lncRNA gene predicted gene, 39080