Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:118696298-118866328

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gde1 7 118688558 to 118705738 17180 - protein coding gene glycerophosphodiester phosphodiesterase 1
Cpgi19625 7 118705075 to 118705919 844 CpG island CpG island 19625
Tssr74452 7 118705708 to 118705786 78 - TSS region transcription start site region 74452
Tssr74453 7 118707347 to 118707352 5 - TSS region transcription start site region 74453
Cpgi19626 7 118712390 to 118713049 659 CpG island CpG island 19626
Tssr68726 7 118712516 to 118712572 56 + TSS region transcription start site region 68726
Ccp110 7 118712552 to 118737024 24472 + protein coding gene centriolar coiled coil protein 110
Tssr68727 7 118712573 to 118712616 43 + TSS region transcription start site region 68727
Tssr68728 7 118712667 to 118712679 12 + TSS region transcription start site region 68728
Tssr68729 7 118731867 to 118731871 4 + TSS region transcription start site region 68729
Vps35l 7 118740197 to 118841491 101294 + protein coding gene VPS35 endosomal protein sorting factor like
Cpgi19627 7 118740380 to 118741139 759 CpG island CpG island 19627
1700016B15Rik 7 118740449 to 118741181 732 - unclassified gene RIKEN cDNA 1700016B15 gene
Tssr74454 7 118740571 to 118740613 42 - TSS region transcription start site region 74454
Tssr68730 7 118740724 to 118740754 30 + TSS region transcription start site region 68730
Tssr2384 7 118761456 to 118761463 7 - TSS region transcription start site region 2384
Gm44549 7 118768017 to 118768593 576 + sense intronic lncRNA gene predicted gene 44549
Tssr74455 7 118781298 to 118781328 30 - TSS region transcription start site region 74455
Gm44550 7 118785143 to 118787200 2057 + unclassified gene predicted gene 44550
Gm26147 7 118832565 to 118832678 113 + snoRNA gene predicted gene, 26147
Knop1 7 118842217 to 118855998 13781 - protein coding gene lysine rich nucleolar protein 1
Tssr74456 7 118850773 to 118850784 11 - TSS region transcription start site region 74456
Cpgi19628 7 118855109 to 118856379 1270 CpG island CpG island 19628
Tssr74457 7 118855649 to 118855695 46 - TSS region transcription start site region 74457
Tssr68731 7 118855735 to 118855798 63 + TSS region transcription start site region 68731
Iqck 7 118855753 to 118972652 116899 + protein coding gene IQ motif containing K
Tssr74458 7 118855951 to 118855960 9 - TSS region transcription start site region 74458
Tssr74459 7 118855974 to 118855981 7 - TSS region transcription start site region 74459
Tssr74460 7 118855984 to 118856014 30 - TSS region transcription start site region 74460
Tssr74461 7 118856017 to 118856020 3 - TSS region transcription start site region 74461
Tssr74462 7 118856033 to 118856040 7 - TSS region transcription start site region 74462
Tssr74463 7 118856361 to 118856373 12 - TSS region transcription start site region 74463