Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:118565066-119425079

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lskcn2 7 108883789 to 119094307 10210518 QTL LSK cell number 2
Tmc7 7 118535841 to 118584736 48895 - protein coding gene transmembrane channel-like gene family 7
Tssr74449 7 118578366 to 118578394 28 - TSS region transcription start site region 74449
Cpgi19623 7 118584284 to 118584875 591 CpG island CpG island 19623
Tssr74450 7 118584669 to 118584741 72 - TSS region transcription start site region 74450
Tssr68714 7 118592279 to 118592315 36 + TSS region transcription start site region 68714
B230311B06Rik 7 118592328 to 118596838 4510 + lincRNA gene RIKEN cDNA B230311B06 gene
Tssr68715 7 118592484 to 118592505 21 + TSS region transcription start site region 68715
Tssr68716 7 118593698 to 118593702 4 + TSS region transcription start site region 68716
Tssr68717 7 118597295 to 118597342 47 + TSS region transcription start site region 68717
Tmc5 7 118597297 to 118675086 77789 + protein coding gene transmembrane channel-like gene family 5
Cpgi19624 7 118597384 to 118597857 473 CpG island CpG island 19624
Tssr68718 7 118600152 to 118600173 21 + TSS region transcription start site region 68718
Tssr68719 7 118600178 to 118600183 5 + TSS region transcription start site region 68719
Tssr68720 7 118600194 to 118600204 10 + TSS region transcription start site region 68720
Tssr68721 7 118600208 to 118600234 26 + TSS region transcription start site region 68721
Tssr68722 7 118600236 to 118600264 28 + TSS region transcription start site region 68722
Tssr68723 7 118633729 to 118633749 20 + TSS region transcription start site region 68723
Tssr68724 7 118633752 to 118633766 14 + TSS region transcription start site region 68724
Tssr68725 7 118649147 to 118649194 47 + TSS region transcription start site region 68725
Gm45236 7 118688545 to 118688773 228 + unclassified gene predicted gene 45236
Gde1 7 118688558 to 118705738 17180 - protein coding gene glycerophosphodiester phosphodiesterase 1
Tssr74451 7 118695074 to 118695092 18 - TSS region transcription start site region 74451
Cpgi19625 7 118705075 to 118705919 844 CpG island CpG island 19625
Tssr74452 7 118705708 to 118705786 78 - TSS region transcription start site region 74452
Tssr74453 7 118707347 to 118707352 5 - TSS region transcription start site region 74453
Cpgi19626 7 118712390 to 118713049 659 CpG island CpG island 19626
Tssr68726 7 118712516 to 118712572 56 + TSS region transcription start site region 68726
Ccp110 7 118712552 to 118737024 24472 + protein coding gene centriolar coiled coil protein 110
Tssr68727 7 118712573 to 118712616 43 + TSS region transcription start site region 68727
Tssr68728 7 118712667 to 118712679 12 + TSS region transcription start site region 68728
Tssr68729 7 118731867 to 118731871 4 + TSS region transcription start site region 68729
Vps35l 7 118740197 to 118841491 101294 + protein coding gene VPS35 endosomal protein sorting factor like
Cpgi19627 7 118740380 to 118741139 759 CpG island CpG island 19627
1700016B15Rik 7 118740449 to 118741181 732 - unclassified gene RIKEN cDNA 1700016B15 gene
Tssr74454 7 118740571 to 118740613 42 - TSS region transcription start site region 74454
Tssr68730 7 118740724 to 118740754 30 + TSS region transcription start site region 68730
Tssr2384 7 118761456 to 118761463 7 - TSS region transcription start site region 2384
Gm44549 7 118768017 to 118768593 576 + sense intronic lncRNA gene predicted gene 44549
Tssr74455 7 118781298 to 118781328 30 - TSS region transcription start site region 74455
Gm44550 7 118785143 to 118787200 2057 + unclassified gene predicted gene 44550
Gm26147 7 118832565 to 118832678 113 + snoRNA gene predicted gene, 26147
Knop1 7 118842217 to 118855998 13781 - protein coding gene lysine rich nucleolar protein 1
Tssr74456 7 118850773 to 118850784 11 - TSS region transcription start site region 74456
Cpgi19628 7 118855109 to 118856379 1270 CpG island CpG island 19628
Tssr74457 7 118855649 to 118855695 46 - TSS region transcription start site region 74457
Tssr68731 7 118855735 to 118855798 63 + TSS region transcription start site region 68731
Iqck 7 118855753 to 118972652 116899 + protein coding gene IQ motif containing K
Tssr74458 7 118855951 to 118855960 9 - TSS region transcription start site region 74458
Tssr74459 7 118855974 to 118855981 7 - TSS region transcription start site region 74459
Tssr74460 7 118855984 to 118856014 30 - TSS region transcription start site region 74460
Tssr74461 7 118856017 to 118856020 3 - TSS region transcription start site region 74461
Tssr74462 7 118856033 to 118856040 7 - TSS region transcription start site region 74462
Tssr74463 7 118856361 to 118856373 12 - TSS region transcription start site region 74463
Tssr68732 7 118912617 to 118912641 24 + TSS region transcription start site region 68732
Tssr68733 7 118937076 to 118937083 7 + TSS region transcription start site region 68733
Tssr68734 7 118937120 to 118937123 3 + TSS region transcription start site region 68734
Gm44763 7 118967668 to 118969686 2018 - antisense lncRNA gene predicted gene 44763
Gprc5b 7 118972047 to 118995211 23164 - protein coding gene G protein-coupled receptor, family C, group 5, member B
Tssr74464 7 118973712 to 118973716 4 - TSS region transcription start site region 74464
Tssr74465 7 118974618 to 118974631 13 - TSS region transcription start site region 74465
Tssr2385 7 118974763 to 118974787 24 - TSS region transcription start site region 2385
Tssr74466 7 118974958 to 118974979 21 - TSS region transcription start site region 74466
Tssr74467 7 118976674 to 118976691 17 - TSS region transcription start site region 74467
Tssr74468 7 118976698 to 118976729 31 - TSS region transcription start site region 74468
Tssr74469 7 118976801 to 118976828 27 - TSS region transcription start site region 74469
Tssr74470 7 118983751 to 118983759 8 - TSS region transcription start site region 74470
Cpgi19629 7 118983928 to 118984555 627 CpG island CpG island 19629
Tssr74471 7 118984038 to 118984069 31 - TSS region transcription start site region 74471
Tssr74472 7 118984077 to 118984101 24 - TSS region transcription start site region 74472
Gm39076 7 118985040 to 118988595 3555 + lncRNA gene predicted gene, 39076
Cpgi19630 7 118993959 to 118995994 2035 CpG island CpG island 19630
Tssr74473 7 118995066 to 118995079 13 - TSS region transcription start site region 74473
Tssr74474 7 118995091 to 118995105 14 - TSS region transcription start site region 74474
Tssr74475 7 118995142 to 118995203 61 - TSS region transcription start site region 74475
Tssr74476 7 118995212 to 118995219 7 - TSS region transcription start site region 74476
Cfld4 7 119094158 to 119094307 149 QTL cystic fibrosis lung disease 4
Cfbw3 7 119094158 to 119094307 149 QTL cystic fibrosis body weight 3
Adbg1 7 119094158 to 144844577 25750419 QTL adult body growth 1
D7Mit238 7 119094158 to 119094307 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 238
Vtbt4 7 119094158 to 119094307 149 QTL vertebral trabecular bone trait 4
Bw1n 7 119094307 to 45512542 -73581765 QTL body weight 1 in NSY
Gpr139 7 119144323 to 119184374 40051 - protein coding gene G protein-coupled receptor 139
Cpgi19631 7 119184166 to 119184793 627 CpG island CpG island 19631
Tssr74477 7 119184527 to 119184546 19 - TSS region transcription start site region 74477
Tssr74478 7 119184548 to 119184572 24 - TSS region transcription start site region 74478
Tssr74479 7 119184598 to 119184619 21 - TSS region transcription start site region 74479
Cpgi19632 7 119185280 to 119185559 279 CpG island CpG island 19632
Stmm2a 7 119283163 to 119283163 0 QTL skin tumor modifier of MSM 2a
Gm4083 7 119301257 to 119301707 450 - pseudogene predicted gene 4083
Gm23321 7 119306123 to 119306248 125 - snoRNA gene predicted gene, 23321