Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:118178170-118550075

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smg1 7 118131308 to 118243657 112349 - protein coding gene SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
Gm40454 7 118180961 to 118182367 1406 - lncRNA gene predicted gene, 40454
Tssr74426 7 118188060 to 118188073 13 - TSS region transcription start site region 74426
Tssr74427 7 118188088 to 118188118 30 - TSS region transcription start site region 74427
D7Ertd183e 7 118192563 to 118192778 215 DNA segment DNA segment, Chr 7, ERATO Doi 183, expressed
Tssr2383 7 118210622 to 118210631 9 - TSS region transcription start site region 2383
Gm45084 7 118229401 to 118231357 1956 - unclassified gene predicted gene 45084
Cpgi19616 7 118242888 to 118244387 1499 CpG island CpG island 19616
Tssr74428 7 118243362 to 118243412 50 - TSS region transcription start site region 74428
Tssr74429 7 118243525 to 118243536 11 - TSS region transcription start site region 74429
Tssr74430 7 118243564 to 118243641 77 - TSS region transcription start site region 74430
Tssr74431 7 118243669 to 118243686 17 - TSS region transcription start site region 74431
Tssr68712 7 118243860 to 118243871 11 + TSS region transcription start site region 68712
4930583K01Rik 7 118243907 to 118245551 1644 + bidirectional promoter lncRNA gene RIKEN cDNA 4930583K01 gene
Gm34999 7 118259483 to 118280424 20941 + lncRNA gene predicted gene, 34999
Gm45155 7 118273292 to 118275363 2071 - lincRNA gene predicted gene 45155
Tssr74432 7 118275381 to 118275437 56 - TSS region transcription start site region 74432
Gm23229 7 118279861 to 118279965 104 + snRNA gene predicted gene, 23229
Cpgi19617 7 118304866 to 118305064 198 CpG island CpG island 19617
Gm35083 7 118323100 to 118328648 5548 - protein coding gene predicted gene, 35083
Tssr74433 7 118326909 to 118326926 17 - TSS region transcription start site region 74433
Tssr68713 7 118329453 to 118329465 12 + TSS region transcription start site region 68713
Gm35309 7 118329486 to 118330121 635 + lincRNA gene predicted gene, 35309
Gm32766 7 118358170 to 118370075 11905 - protein coding gene predicted gene, 32766
Syt17 7 118380717 to 118448222 67505 - protein coding gene synaptotagmin XVII
D7Mit7 7 118394038 to 118394119 81 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 7
Fembm3 7 118394038 to 118394119 81 QTL femoral bone morphometry 3
Cpgi19618 7 118434111 to 118434605 494 CpG island CpG island 19618
Tssr74434 7 118443527 to 118443545 18 - TSS region transcription start site region 74434
Tssr74435 7 118443549 to 118443571 22 - TSS region transcription start site region 74435
Cpgi19619 7 118447315 to 118448996 1681 CpG island CpG island 19619
Tssr74436 7 118447920 to 118447948 28 - TSS region transcription start site region 74436
Tssr74437 7 118448172 to 118448227 55 - TSS region transcription start site region 74437
D7Mit1002 7 118457886 to 118458012 126 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 1002
D7Mit100 7 118465450 to 118465652 202 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 100
Gm44652 7 118480495 to 118483348 2853 + unclassified gene predicted gene 44652
Itpripl2 7 118485111 to 118491975 6864 - protein coding gene inositol 1,4,5-triphosphate receptor interacting protein-like 2
Tssr74438 7 118485642 to 118485657 15 - TSS region transcription start site region 74438
Tssr74439 7 118487536 to 118487566 30 - TSS region transcription start site region 74439
Tssr74440 7 118488253 to 118488288 35 - TSS region transcription start site region 74440
Cpgi19620 7 118489735 to 118492231 2496 CpG island CpG island 19620
Tssr74441 7 118491466 to 118491516 50 - TSS region transcription start site region 74441
Tssr74442 7 118491734 to 118491767 33 - TSS region transcription start site region 74442
Tssr74443 7 118491809 to 118491868 59 - TSS region transcription start site region 74443
Tssr74444 7 118491879 to 118491903 24 - TSS region transcription start site region 74444
Tssr74445 7 118491912 to 118491965 53 - TSS region transcription start site region 74445
Coq7 7 118509659 to 118533356 23697 - protein coding gene demethyl-Q 7
Cpgi19621 7 118518681 to 118519063 382 CpG island CpG island 19621
Cpgi19622 7 118532810 to 118533555 745 CpG island CpG island 19622
Tssr74446 7 118533269 to 118533274 5 - TSS region transcription start site region 74446
Tssr74447 7 118533298 to 118533333 35 - TSS region transcription start site region 74447
Tmc7 7 118535841 to 118584736 48895 - protein coding gene transmembrane channel-like gene family 7
Tssr74448 7 118537856 to 118537861 5 - TSS region transcription start site region 74448