Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:117930560-118179838

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D7Mit239 7 117987004 to 117987108 104 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 239
Tssr68709 7 117998529 to 117998534 5 + TSS region transcription start site region 68709
Gm34878 7 118050560 to 118059838 9278 - lncRNA gene predicted gene, 34878
D7Mit132 7 118061804 to 118061933 129 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 132
Rps15a 7 118104374 to 118116147 11773 - protein coding gene ribosomal protein S15A
Tssr68710 7 118114071 to 118114113 42 + TSS region transcription start site region 68710
Cpgi19614 7 118115622 to 118116409 787 CpG island CpG island 19614
Tssr74416 7 118116146 to 118116167 21 - TSS region transcription start site region 74416
Tssr74417 7 118116171 to 118116198 27 - TSS region transcription start site region 74417
Arl6ip1 7 118118890 to 118129625 10735 - protein coding gene ADP-ribosylation factor-like 6 interacting protein 1
Tssr74418 7 118119209 to 118119250 41 - TSS region transcription start site region 74418
Tssr74419 7 118126585 to 118126591 6 - TSS region transcription start site region 74419
Tssr74420 7 118127176 to 118127229 53 - TSS region transcription start site region 74420
Tssr74421 7 118128664 to 118128670 6 - TSS region transcription start site region 74421
Cpgi19615 7 118128957 to 118130008 1051 CpG island CpG island 19615
Tssr74422 7 118129567 to 118129584 17 - TSS region transcription start site region 74422
Tssr2382 7 118129592 to 118129599 7 - TSS region transcription start site region 2382
Tssr68711 7 118129816 to 118129836 20 + TSS region transcription start site region 68711
Smg1 7 118131308 to 118243657 112349 - protein coding gene SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
Tssr74423 7 118139191 to 118139218 27 - TSS region transcription start site region 74423
Tssr74424 7 118146995 to 118147000 5 - TSS region transcription start site region 74424
Tssr74425 7 118150616 to 118150620 4 - TSS region transcription start site region 74425
Lmr21a 7 118151499 to 128365612 10214113 QTL leishmaniasis resistance 21a
D7Mit282 7 118151499 to 118151620 121 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 282
Tbbr3 7 118151499 to 118151620 121 QTL Trypanosoma brucei brucei response 3
Gm25683 7 118153480 to 118153610 130 + snoRNA gene predicted gene, 25683