Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:116525937-118235992

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nucb2 7 116504369 to 116540584 36215 + protein coding gene nucleobindin 2
Gm45151 7 116543656 to 116545755 2099 + lincRNA gene predicted gene 45151
4732496C06Rik 7 116546865 to 116549364 2499 + lincRNA gene RIKEN cDNA 4732496C06 gene
Tssr68695 7 116546897 to 116546900 3 + TSS region transcription start site region 68695
Gm9197 7 116598054 to 116598504 450 - pseudogene predicted gene 9197
Tssr68696 7 116604052 to 116604053 1 + TSS region transcription start site region 68696
n-R5s157 7 116625122 to 116625242 120 - rRNA gene nuclear encoded rRNA 5S 157
Gm46018 7 116657881 to 116665163 7282 + lncRNA gene predicted gene, 46018
Tssr68697 7 116665733 to 116665736 3 + TSS region transcription start site region 68697
Gm25423 7 116691379 to 116691485 106 - snRNA gene predicted gene, 25423
Cpgi19612 7 116701095 to 116701283 188 CpG island CpG island 19612
Gm39074 7 116717679 to 116726131 8452 + lncRNA gene predicted gene, 39074
Gm45948 7 116726279 to 116732315 6036 + lncRNA gene predicted gene, 45948
Gm6008 7 116803624 to 116804464 840 - pseudogene predicted gene 6008
D7Mit40 7 116817442 to 116817642 200 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 40
Bbaa16 7 116817642 to 36580590 -80237052 QTL B.burgdorferi-associated arthritis 16
Gm4366 7 116824510 to 116825851 1341 - pseudogene predicted gene 4366
Tssr74411 7 116825842 to 116825847 5 - TSS region transcription start site region 74411
Gm26054 7 116952589 to 116952695 106 - snRNA gene predicted gene, 26054
D7Mit64 7 117208801 to 117208927 126 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 64
Gm39075 7 117229607 to 117278839 49232 + lincRNA gene predicted gene, 39075
Tons2 7 117238481 to 117238481 0 QTL tongue size 2
Irm1 7 117238481 to 135128325 17889844 QTL inflammatory response modulator 1
Tssr68698 7 117380018 to 117380030 12 + TSS region transcription start site region 68698
Cpgi19613 7 117380313 to 117382019 1706 CpG island CpG island 19613
Tssr68699 7 117380937 to 117380992 55 + TSS region transcription start site region 68699
Xylt1 7 117380979 to 117667630 286651 + protein coding gene xylosyltransferase 1
Tssr68700 7 117380996 to 117381014 18 + TSS region transcription start site region 68700
Gm45153 7 117381862 to 117383762 1900 + unclassified gene predicted gene 45153
Tssr68701 7 117390031 to 117390066 35 + TSS region transcription start site region 68701
Tssr68702 7 117390135 to 117390147 12 + TSS region transcription start site region 68702
Tssr68703 7 117411434 to 117411467 33 + TSS region transcription start site region 68703
Tssr2381 7 117449737 to 117449767 30 - TSS region transcription start site region 2381
Tssr74412 7 117470268 to 117470287 19 - TSS region transcription start site region 74412
Tssr74413 7 117475164 to 117475196 32 - TSS region transcription start site region 74413
Tssr68704 7 117485533 to 117485538 5 + TSS region transcription start site region 68704
Tssr74414 7 117486496 to 117486522 26 - TSS region transcription start site region 74414
Tssr74415 7 117486545 to 117486556 11 - TSS region transcription start site region 74415
Tssr68705 7 117486707 to 117486754 47 + TSS region transcription start site region 68705
Tssr68706 7 117568473 to 117568529 56 + TSS region transcription start site region 68706
Tssr68707 7 117604468 to 117604472 4 + TSS region transcription start site region 68707
Tssr68708 7 117670618 to 117670642 24 + TSS region transcription start site region 68708
Gm34762 7 117719378 to 117759196 39818 - lncRNA gene predicted gene, 34762
D7Mit329 7 117748872 to 117748996 124 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 329
Gm24063 7 117776794 to 117776898 104 + miRNA gene predicted gene, 24063
Gm34822 7 117849939 to 117851343 1404 - lncRNA gene predicted gene, 34822
D7Mit239 7 117987004 to 117987108 104 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 239
Tssr68709 7 117998529 to 117998534 5 + TSS region transcription start site region 68709
Gm34878 7 118050560 to 118059838 9278 - lncRNA gene predicted gene, 34878
D7Mit132 7 118061804 to 118061933 129 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 132
Rps15a 7 118104374 to 118116147 11773 - protein coding gene ribosomal protein S15A
Tssr68710 7 118114071 to 118114113 42 + TSS region transcription start site region 68710
Cpgi19614 7 118115622 to 118116409 787 CpG island CpG island 19614
Tssr74416 7 118116146 to 118116167 21 - TSS region transcription start site region 74416
Tssr74417 7 118116171 to 118116198 27 - TSS region transcription start site region 74417
Arl6ip1 7 118118890 to 118129625 10735 - protein coding gene ADP-ribosylation factor-like 6 interacting protein 1
Tssr74418 7 118119209 to 118119250 41 - TSS region transcription start site region 74418
Tssr74419 7 118126585 to 118126591 6 - TSS region transcription start site region 74419
Tssr74420 7 118127176 to 118127229 53 - TSS region transcription start site region 74420
Tssr74421 7 118128664 to 118128670 6 - TSS region transcription start site region 74421
Cpgi19615 7 118128957 to 118130008 1051 CpG island CpG island 19615
Tssr74422 7 118129567 to 118129584 17 - TSS region transcription start site region 74422
Tssr2382 7 118129592 to 118129599 7 - TSS region transcription start site region 2382
Tssr68711 7 118129816 to 118129836 20 + TSS region transcription start site region 68711
Smg1 7 118131308 to 118243657 112349 - protein coding gene SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
Tssr74423 7 118139191 to 118139218 27 - TSS region transcription start site region 74423
Tssr74424 7 118146995 to 118147000 5 - TSS region transcription start site region 74424
Tssr74425 7 118150616 to 118150620 4 - TSS region transcription start site region 74425
Tbbr3 7 118151499 to 118151620 121 QTL Trypanosoma brucei brucei response 3
D7Mit282 7 118151499 to 118151620 121 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 282
Lmr21a 7 118151499 to 128365612 10214113 QTL leishmaniasis resistance 21a
Gm25683 7 118153480 to 118153610 130 + snoRNA gene predicted gene, 25683
Gm40454 7 118180961 to 118182367 1406 - lncRNA gene predicted gene, 40454
Tssr74426 7 118188060 to 118188073 13 - TSS region transcription start site region 74426
Tssr74427 7 118188088 to 118188118 30 - TSS region transcription start site region 74427
D7Ertd183e 7 118192563 to 118192778 215 DNA segment DNA segment, Chr 7, ERATO Doi 183, expressed
Tssr2383 7 118210622 to 118210631 9 - TSS region transcription start site region 2383
Gm45084 7 118229401 to 118231357 1956 - unclassified gene predicted gene 45084